Result of FASTA (ccds) for
pF1KB5361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5361, 429 aa
1>>>pF1KB5361 429 - 429 aa - 429 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5424+/-0.00105; mu= -1.0381+/- 0.063
mean_var=228.4982+/-46.349, 0's: 0 Z-trim(111.7): 65 B-trim: 737 in 1/51
Lambda= 0.084846
statistics sampled from 12562 (12621) to 12562 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.388), width: 16
Scan time: 2.900
The best scores are: opt bits E(32554)
CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 ( 429) 2926 370.9 1.3e-102
CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1 ( 399) 2707 344.1 1.5e-94
CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1 ( 424) 2693 342.4 5.1e-94
CCDS55593.1 SMAP2 gene_id:64744|Hs108|chr1 ( 349) 2360 301.6 8.1e-82
CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6 ( 440) 1296 171.4 1.6e-42
CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 ( 436) 1185 157.8 1.9e-38
CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 467) 758 105.5 1.1e-22
CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 457) 643 91.5 1.9e-18
>>CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 (429 aa)
initn: 2926 init1: 2926 opt: 2926 Z-score: 1955.5 bits: 370.9 E(32554): 1.3e-102
Smith-Waterman score: 2926; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429)
10 20 30 40 50 60
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAAN
370 380 390 400 410 420
pF1KB5 QTLSPQMWK
:::::::::
CCDS45 QTLSPQMWK
>>CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1 (399 aa)
initn: 2707 init1: 2707 opt: 2707 Z-score: 1811.1 bits: 344.1 E(32554): 1.5e-94
Smith-Waterman score: 2707; 100.0% identity (100.0% similar) in 396 aa overlap (34-429:4-399)
10 20 30 40 50 60
pF1KB5 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHIS
::::::::::::::::::::::::::::::
CCDS55 MIFKGPRWASWNIGVFICIRCAGIHRNLGVHIS
10 20 30
70 80 90 100 110 120
pF1KB5 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
340 350 360 370 380 390
pF1KB5 SPQMWK
::::::
CCDS55 SPQMWK
>>CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1 (424 aa)
initn: 2693 init1: 2693 opt: 2693 Z-score: 1801.4 bits: 342.4 E(32554): 5.1e-94
Smith-Waterman score: 2693; 100.0% identity (100.0% similar) in 394 aa overlap (36-429:31-424)
10 20 30 40 50 60
pF1KB5 VKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRV
::::::::::::::::::::::::::::::
CCDS72 MGKVGRARFAQKDVLQIEEIGPVKLFVRDWPRWASWNIGVFICIRCAGIHRNLGVHISRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 RSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 NLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 MAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSP
370 380 390 400 410 420
pF1KB5 QMWK
::::
CCDS72 QMWK
>>CCDS55593.1 SMAP2 gene_id:64744|Hs108|chr1 (349 aa)
initn: 2360 init1: 2360 opt: 2360 Z-score: 1582.4 bits: 301.6 E(32554): 8.1e-82
Smith-Waterman score: 2360; 100.0% identity (100.0% similar) in 349 aa overlap (81-429:1-349)
60 70 80 90 100 110
pF1KB5 CAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV
::::::::::::::::::::::::::::::
CCDS55 MQEMGNGKANRLYEAYLPETFRRPQIDPAV
10 20 30
120 130 140 150 160 170
pF1KB5 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB5 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS
280 290 300 310 320 330
420
pF1KB5 MSGGNGQAANQTLSPQMWK
:::::::::::::::::::
CCDS55 MSGGNGQAANQTLSPQMWK
340
>>CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6 (440 aa)
initn: 1147 init1: 734 opt: 1296 Z-score: 877.0 bits: 171.4 E(32554): 1.6e-42
Smith-Waterman score: 1297; 50.1% identity (73.3% similar) in 445 aa overlap (4-429:9-440)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
CCDS49 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
CCDS49 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
CCDS49 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
130 140 150 160 170
180 190 200 210 220
pF1KB5 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
CCDS49 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
CCDS49 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
CCDS49 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::::..
CCDS49 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSIS
350 360 370 380 390 400
400 410 420
pF1KB5 GANGMMNYGQSMS---GGNGQAANQTLSPQMWK
.:. ..:: : : .:....:::: :.::
CCDS49 SATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
410 420 430 440
>>CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 (436 aa)
initn: 1032 init1: 734 opt: 1185 Z-score: 803.6 bits: 157.8 E(32554): 1.9e-38
Smith-Waterman score: 1186; 50.4% identity (73.1% similar) in 405 aa overlap (4-392:9-400)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
CCDS64 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
CCDS64 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
CCDS64 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
130 140 150 160 170
180 190 200 210 220
pF1KB5 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
CCDS64 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
CCDS64 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
CCDS64 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.:. :.
CCDS64 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQH
350 360 370 380 390 400
400 410 420
pF1KB5 GANGMMNYGQSMSGGNGQAANQTLSPQMWK
CCDS64 SISAIYWPMTRWLKCPLVDESADGWHEYQ
410 420 430
>>CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6 (467 aa)
initn: 1188 init1: 674 opt: 758 Z-score: 520.7 bits: 105.5 E(32554): 1.1e-22
Smith-Waterman score: 1261; 47.6% identity (69.6% similar) in 471 aa overlap (4-429:9-467)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
CCDS43 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
CCDS43 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140
pF1KB5 DKYEKKKYMDRS--------------------------LDINAFRKEKDDKWK-RGSEPV
::::::::.:.. .: : ..:::. : . . :
CCDS43 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB5 PEKKLEPVVFEKVKMPQKKEDPQLPRKS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-N
::: .:.. ::. :::.. :.:: :::..: :..::::::.:.. ..:..:.
CCDS43 PEKPAKPLTAEKL---QKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVP
190 200 210 220 230
210 220 230 240 250 260
pF1KB5 TLEKDLDL---LASVPSPSSS-GSRKVVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGK
:. :::. . : : :.. . . : :.:.. ..: .:.:: : .::::..:
CCDS43 PLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAK
240 250 260 270 280 290
270 280 290 300 310
pF1KB5 KQLSKDSILSLYGSQT-PQMPTQAMFMAPAQMAY----PTAYPSFP--GVTPPNSIMGSM
:::::::::::::. : :. : ..::.:... . :.:. .:: :: : .
CCDS43 KQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAA-----
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB5 MPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTV
: .: : . : ::. : :: :.::. :...: .:.... : : :.:. . ::.
CCDS43 -PGLIGNVMGQSPSMMVG-MPMPNGFMGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSK
360 370 380 390 400
380 390 400 410 420
pF1KB5 YGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMS---GGNGQAANQTLSPQMWK
.:. ::: ::.:.::.::::::.. .:. ..:: : : .:....:::: :.::
CCDS43 FGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
410 420 430 440 450 460
>>CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6 (457 aa)
initn: 1076 init1: 562 opt: 643 Z-score: 444.8 bits: 91.5 E(32554): 1.9e-18
Smith-Waterman score: 1146; 47.3% identity (68.6% similar) in 440 aa overlap (35-429:30-457)
10 20 30 40 50 60
pF1KB5 SVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISR
::::::::::::::::::::::::::::::
CCDS75 MEPYLPAHLTAFVQGFYLCFLKKSMVVFFGPRWASWNIGVFICIRCAGIHRNLGVHISR
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 VKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYM
:::::::::: :::::::.::: :: :::: :::.::::: : ::: :::::::::::.
CCDS75 VKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY
60 70 80 90 100 110
130 140 150
pF1KB5 DRS--------------------------LDINAFRKEKDDKWK-RGSEPVPEKKLEPVV
:.. .: : ..:::. : . . : ::: .:..
CCDS75 DKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAKPLT
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB5 FEKVKMPQKKEDPQLPRKS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL-
::. :::.. :.:: :::..: :..::::::.:.. ..:..:. :. :::.
CCDS75 AEKL---QKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIF
180 190 200 210 220 230
220 230 240 250 260
pF1KB5 --LASVPSPSSS-GSRKVVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSIL
. : : :.. . . : :.:.. ..: .:.:: : .::::..::::::::::
CCDS75 GPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSIL
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB5 SLYGSQT-PQMPTQAMFMAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVA
::::. : :. : ..::.:... . :.:. .:: :: : . : .: :
CCDS75 SLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVM
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB5 QPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQL
. : ::. : :: :.::. :...: .:.... : : :.:. . ::. .:. :::
CCDS75 GQSPSMMVG-MPMPNGFMGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQP
360 370 380 390 400
390 400 410 420
pF1KB5 QWNLTQMTQQMAGMNFYGANGMMNYGQSMS---GGNGQAANQTLSPQMWK
::.:.::.::::::.. .:. ..:: : : .:....:::: :.::
CCDS75 QWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
410 420 430 440 450
429 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:30:35 2016 done: Sat Nov 5 12:30:36 2016
Total Scan time: 2.900 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]