Result of FASTA (omim) for
pF1KB5353
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5353, 391 aa
1>>>pF1KB5353 391 - 391 aa - 391 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4833+/-0.000373; mu= 14.0820+/- 0.024
mean_var=162.0957+/-31.964, 0's: 0 Z-trim(118.3): 30 B-trim: 0 in 0/54
Lambda= 0.100737
statistics sampled from 30999 (31029) to 30999 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.364), width: 16
Scan time: 6.930
The best scores are: opt bits E(85289)
XP_016874827 (OMIM: 164060) PREDICTED: nucleosome ( 391) 2624 393.2 5.6e-109
NP_631946 (OMIM: 164060) nucleosome assembly prote ( 391) 2624 393.2 5.6e-109
NP_001317160 (OMIM: 164060) nucleosome assembly pr ( 391) 2624 393.2 5.6e-109
XP_011536695 (OMIM: 164060) PREDICTED: nucleosome ( 391) 2624 393.2 5.6e-109
NP_004528 (OMIM: 164060) nucleosome assembly prote ( 391) 2624 393.2 5.6e-109
NP_001294853 (OMIM: 164060) nucleosome assembly pr ( 383) 2417 363.1 6.3e-100
XP_016874828 (OMIM: 164060) PREDICTED: nucleosome ( 328) 2200 331.5 1.8e-90
XP_016874829 (OMIM: 164060) PREDICTED: nucleosome ( 328) 2200 331.5 1.8e-90
NP_001317161 (OMIM: 164060) nucleosome assembly pr ( 328) 2200 331.5 1.8e-90
NP_005960 (OMIM: 601651) nucleosome assembly prote ( 375) 1635 249.4 1e-65
NP_068798 (OMIM: 300026) nucleosome assembly prote ( 460) 795 127.5 6.5e-29
NP_004529 (OMIM: 300117) nucleosome assembly prote ( 506) 706 114.6 5.4e-25
NP_715638 (OMIM: 612203) nucleosome assembly prote ( 182) 234 45.5 0.00012
>>XP_016874827 (OMIM: 164060) PREDICTED: nucleosome asse (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2077.4 bits: 393.2 E(85289): 5.6e-109
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
XP_016 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>NP_631946 (OMIM: 164060) nucleosome assembly protein 1 (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2077.4 bits: 393.2 E(85289): 5.6e-109
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_631 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
NP_631 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>NP_001317160 (OMIM: 164060) nucleosome assembly protei (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2077.4 bits: 393.2 E(85289): 5.6e-109
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
NP_001 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>XP_011536695 (OMIM: 164060) PREDICTED: nucleosome asse (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2077.4 bits: 393.2 E(85289): 5.6e-109
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
XP_011 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>NP_004528 (OMIM: 164060) nucleosome assembly protein 1 (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2077.4 bits: 393.2 E(85289): 5.6e-109
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
NP_004 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>NP_001294853 (OMIM: 164060) nucleosome assembly protei (383 aa)
initn: 2417 init1: 2417 opt: 2417 Z-score: 1914.9 bits: 363.1 E(85289): 6.3e-100
Smith-Waterman score: 2417; 100.0% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::
NP_001 ADEGYQLFEEVKSCSKLFQRWLQ
370 380
>>XP_016874828 (OMIM: 164060) PREDICTED: nucleosome asse (328 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 1745.3 bits: 331.5 E(85289): 1.8e-90
Smith-Waterman score: 2200; 99.4% identity (100.0% similar) in 325 aa overlap (67-391:4-328)
40 50 60 70 80 90
pF1KB5 QLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFY
:..:::::::::::::::::::::::::::
XP_016 MADIDNLPRVVKRRVNALKNLQVKCAQIEAKFY
10 20 30
100 110 120 130 140 150
pF1KB5 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
280 290 300 310 320
>>XP_016874829 (OMIM: 164060) PREDICTED: nucleosome asse (328 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 1745.3 bits: 331.5 E(85289): 1.8e-90
Smith-Waterman score: 2200; 99.4% identity (100.0% similar) in 325 aa overlap (67-391:4-328)
40 50 60 70 80 90
pF1KB5 QLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFY
:..:::::::::::::::::::::::::::
XP_016 MADIDNLPRVVKRRVNALKNLQVKCAQIEAKFY
10 20 30
100 110 120 130 140 150
pF1KB5 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
280 290 300 310 320
>>NP_001317161 (OMIM: 164060) nucleosome assembly protei (328 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 1745.3 bits: 331.5 E(85289): 1.8e-90
Smith-Waterman score: 2200; 99.4% identity (100.0% similar) in 325 aa overlap (67-391:4-328)
40 50 60 70 80 90
pF1KB5 QLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFY
:..:::::::::::::::::::::::::::
NP_001 MADIDNLPRVVKRRVNALKNLQVKCAQIEAKFY
10 20 30
100 110 120 130 140 150
pF1KB5 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
280 290 300 310 320
>>NP_005960 (OMIM: 601651) nucleosome assembly protein 1 (375 aa)
initn: 1730 init1: 865 opt: 1635 Z-score: 1300.8 bits: 249.4 E(85289): 1e-65
Smith-Waterman score: 1635; 64.6% identity (86.6% similar) in 373 aa overlap (13-380:3-374)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
:....: . :...... ....:: :.::::..:::::::::..
NP_005 MADHSFSDGVPSDSVEAAKNAS-NTEKLTDQVMQNPRVLAALQERLDNVP
10 20 30 40
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
.::..:::.::..::::.::::.:::.::.:::::::::::::::::.::::::::: :.
NP_005 HTPSSYIETLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREF
50 60 70 80 90 100
130 140 150 160 170
pF1KB5 INAIYEPTEEECEWKPD--EEDEISEELKEKAKI-EDEKKDEEKEDPKGIPEFWLTVFKN
:.. :::. : ::. . ::.... ..: :. . : :. :::::::::.:.:.:
NP_005 ITGDVEPTDAESEWHSENEEEEKLAGDMKSKVVVTEKAAATAEEPDPKGIPEFWFTIFRN
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 VDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRS
::.::..:::.::::::::.:::::::: :::::::::::::::.:::: ::::::.:.:
NP_005 VDMLSELVQEYDEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 EPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSF
::: .:::::.::::. : :: ::::::::::.:::::::::::::::::.:: : :.::
NP_005 EPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 FNFFAPPEVPESGD-LDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDD-DYD
:::: : .. .:. ::.:.: ::.:::::::.::::.::.:::::::::::::. .
NP_005 FNFFNPLKASGDGESLDEDSEFTLASDFEIGHFFRERIVPRAVLYFTGEAIEDDDNFEEG
290 300 310 320 330 340
360 370 380 390
pF1KB5 EEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
::::: . ::.:::..:.: . .::
NP_005 EEGEEEELEGDEEGEDEDDAEINPKV
350 360 370
391 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:29:29 2016 done: Thu Nov 3 22:29:30 2016
Total Scan time: 6.930 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]