Result of FASTA (ccds) for
pF1KB5353
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5353, 391 aa
1>>>pF1KB5353 391 - 391 aa - 391 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7897+/-0.000933; mu= 12.2147+/- 0.057
mean_var=146.6647+/-28.481, 0's: 0 Z-trim(110.5): 30 B-trim: 0 in 0/52
Lambda= 0.105904
statistics sampled from 11628 (11654) to 11628 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.358), width: 16
Scan time: 3.030
The best scores are: opt bits E(32554)
CCDS9013.1 NAP1L1 gene_id:4673|Hs108|chr12 ( 391) 2624 412.4 3.6e-115
CCDS76581.1 NAP1L1 gene_id:4673|Hs108|chr12 ( 383) 2417 380.8 1.2e-105
CCDS81715.1 NAP1L1 gene_id:4673|Hs108|chr12 ( 328) 2200 347.5 1e-95
CCDS41599.1 NAP1L4 gene_id:4676|Hs108|chr11 ( 375) 1635 261.3 1.1e-69
CCDS14423.1 NAP1L2 gene_id:4674|Hs108|chrX ( 460) 795 133.0 5.3e-31
CCDS14465.1 NAP1L3 gene_id:4675|Hs108|chrX ( 506) 706 119.5 7.1e-27
>>CCDS9013.1 NAP1L1 gene_id:4673|Hs108|chr12 (391 aa)
initn: 2624 init1: 2624 opt: 2624 Z-score: 2181.2 bits: 412.4 E(32554): 3.6e-115
Smith-Waterman score: 2624; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS90 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::
CCDS90 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
370 380 390
>>CCDS76581.1 NAP1L1 gene_id:4673|Hs108|chr12 (383 aa)
initn: 2417 init1: 2417 opt: 2417 Z-score: 2010.4 bits: 380.8 E(32554): 1.2e-105
Smith-Waterman score: 2417; 100.0% identity (100.0% similar) in 363 aa overlap (1-363:1-363)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 INAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEE
310 320 330 340 350 360
370 380 390
pF1KB5 ADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::
CCDS76 ADEGYQLFEEVKSCSKLFQRWLQ
370 380
>>CCDS81715.1 NAP1L1 gene_id:4673|Hs108|chr12 (328 aa)
initn: 2200 init1: 2200 opt: 2200 Z-score: 1832.0 bits: 347.5 E(32554): 1e-95
Smith-Waterman score: 2200; 99.4% identity (100.0% similar) in 325 aa overlap (67-391:4-328)
40 50 60 70 80 90
pF1KB5 QLTVQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFY
:..:::::::::::::::::::::::::::
CCDS81 MADIDNLPRVVKRRVNALKNLQVKCAQIEAKFY
10 20 30
100 110 120 130 140 150
pF1KB5 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEK
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEF
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKK
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIP
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
280 290 300 310 320
>>CCDS41599.1 NAP1L4 gene_id:4676|Hs108|chr11 (375 aa)
initn: 1730 init1: 865 opt: 1635 Z-score: 1364.8 bits: 261.3 E(32554): 1.1e-69
Smith-Waterman score: 1635; 64.6% identity (86.6% similar) in 373 aa overlap (13-380:3-374)
10 20 30 40 50 60
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAALQERLDGLV
:....: . :...... ....:: :.::::..:::::::::..
CCDS41 MADHSFSDGVPSDSVEAAKNAS-NTEKLTDQVMQNPRVLAALQERLDNVP
10 20 30 40
70 80 90 100 110 120
pF1KB5 ETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEI
.::..:::.::..::::.::::.:::.::.:::::::::::::::::.::::::::: :.
CCDS41 HTPSSYIETLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREF
50 60 70 80 90 100
130 140 150 160 170
pF1KB5 INAIYEPTEEECEWKPD--EEDEISEELKEKAKI-EDEKKDEEKEDPKGIPEFWLTVFKN
:.. :::. : ::. . ::.... ..: :. . : :. :::::::::.:.:.:
CCDS41 ITGDVEPTDAESEWHSENEEEEKLAGDMKSKVVVTEKAAATAEEPDPKGIPEFWFTIFRN
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 VDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRS
::.::..:::.::::::::.:::::::: :::::::::::::::.:::: ::::::.:.:
CCDS41 VDMLSELVQEYDEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 EPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSF
::: .:::::.::::. : :: ::::::::::.:::::::::::::::::.:: : :.::
CCDS41 EPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 FNFFAPPEVPESGD-LDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDD-DYD
:::: : .. .:. ::.:.: ::.:::::::.::::.::.:::::::::::::. .
CCDS41 FNFFNPLKASGDGESLDEDSEFTLASDFEIGHFFRERIVPRAVLYFTGEAIEDDDNFEEG
290 300 310 320 330 340
360 370 380 390
pF1KB5 EEGEEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
::::: . ::.:::..:.: . .::
CCDS41 EEGEEEELEGDEEGEDEDDAEINPKV
350 360 370
>>CCDS14423.1 NAP1L2 gene_id:4674|Hs108|chrX (460 aa)
initn: 1082 init1: 656 opt: 795 Z-score: 670.0 bits: 133.0 E(32554): 5.3e-31
Smith-Waterman score: 1023; 47.1% identity (67.6% similar) in 380 aa overlap (23-361:57-427)
10 20 30 40 50
pF1KB5 MADIDNKEQSELDQDLDDVEEVEEEETGEETKLKARQLTVQMMQNPQILAAL
:: :.::.: . . . .. . :
CCDS14 LGEHLERGEDAAAGLGDDGKCGEEAAAGLGEEGENGEDTAAGSGEDGKKGGDTDEDSEA-
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB5 QERLDGLVE--TPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLY
.: ::. : ..:::: :: :: :::.::.. :..:.:: .: ::.:::.: .:
CCDS14 -DRPKGLIGYVLDTDFVESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMY
90 100 110 120 130 140
120 130 140 150
pF1KB5 QPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEEL-------KEKAKI-----------
:::..:: .::::::::::::::.: : :: .::. .:.. .
CCDS14 QPLLEKRRQIINAIYEPTEEECEYKSDSEDCDDEEMCHEEMYGNEEGMVHEYVDEDDGYE
150 160 170 180 190 200
160 170 180 190
pF1KB5 ------------EDEKKDE---------EKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEP
:.:..:. :.:::::::.:::::.:::: :. .....:::
CCDS14 DYYYDYAVEEEEEEEEEDDIEATGEENKEEEDPKGIPDFWLTVLKNVDTLTPLIKKYDEP
210 220 230 240 250 260
200 210 220 230 240 250
pF1KB5 ILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPE
::: : :::::.:: :.:.::.:::::.::::: ::.::::: ..:. :: . :
CCDS14 ILKLLTDIKVKLSDPGEPLSFTLEFHFKPNEYFKNELLTKTYVLKSKLAYYDPHPYRGTA
270 280 290 300 310 320
260 270 280 290 300 310
pF1KB5 IMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGD
: :::.:::..:::::::::::::::. ::.::::. .:::::::.: . .:
CCDS14 IEYSTGCEIDWNEGKNVTLKTIKKKQKHRIWGTIRTVTEDFPKDSFFNFFSPHGITSNGR
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB5 LDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADEEGEEEGDE
.: :: .:: :: :::::::.:.:.:.:.... .: ..:
CCDS14 DGND-------DFLLGHNLRTYIIPRSVLFFSGDALESQQEGVVREVNDAIYDKIIYDNW
390 400 410 420 430
380 390
pF1KB5 ENDPDYDPKKDQNPAECKQQ
CCDS14 MAAIEEVKACCKNLEALVEDIDR
440 450 460
>>CCDS14465.1 NAP1L3 gene_id:4675|Hs108|chrX (506 aa)
initn: 984 init1: 505 opt: 706 Z-score: 596.0 bits: 119.5 E(32554): 7.1e-27
Smith-Waterman score: 751; 37.4% identity (53.8% similar) in 377 aa overlap (83-345:113-487)
60 70 80 90 100 110
pF1KB5 QERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQP
:.: .: .... : . .:::::::: : .:
CCDS14 PSRRARRAPLGTNFVDRLPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKP
90 100 110 120 130 140
120 130 140
pF1KB5 LFDKRFEIINAIYEPTEEECEWK------------------------------PDEEDEI
:.:.::.:::: ::::::::::. : :. :.
CCDS14 LYDRRFQIINAEYEPTEEECEWNSEDEEFSSDEEVQDNTPSEMPPLEGEEEENPKENPEV
150 160 170 180 190 200
150 160
pF1KB5 SEELKEKAKIEDEKKDEEKE----------------------------------------
. : :: : : ::::::
CCDS14 KAEEKEVPKEIPEVKDEEKEVPKEIPEVKAEEKADSKDCMEATPEVKEDPKEVPQVKADD
210 220 230 240 250 260
170
pF1KB5 --------------------------------------------DPKGIPEFWLTVFKNV
::::::..:: :.:::
CCDS14 KEQPKATEAKARAAVRETHKRVPEERLQDSVDLKRARKGKPKREDPKGIPDYWLIVLKNV
270 280 290 300 310 320
180 190 200 210 220 230
pF1KB5 DLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSE
: :. :.:..:::::: :.:...::: :::.:...:::: :: :: ::::.::: ....
CCDS14 DKLGPMIQKYDEPILKFLSDVSLKFSKPGQPVSYTFEFHFLPNPYFRNEVLVKTYIIKAK
330 340 350 360 370 380
240 250 260 270 280 290
pF1KB5 PDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFF
:: .::: : :: : ::.:::..::.::. : ... . : .. ..: : :::
CCDS14 PDHNDPFFSWGWEIEDCKGCKIDWRRGKDVTVTTTQSRT--TATGEIEIQPRVVPNASFF
390 400 410 420 430 440
300 310 320 330 340 350
pF1KB5 NFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEG
:::.:::.: : :. .::: :::::..:.. .: .:. :.:::
CCDS14 NFFSPPEIPMIGKLEPREDAILDEDFEIGQILHDNVILKSIYYYTGEVNGTYYQFGKHYG
450 460 470 480 490 500
360 370 380 390
pF1KB5 EEADEEGEEEGDEENDPDYDPKKDQNPAECKQQ
CCDS14 NKKYRK
391 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:29:29 2016 done: Thu Nov 3 22:29:29 2016
Total Scan time: 3.030 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]