Result of FASTA (omim) for
pF1KB5331
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5331, 415 aa
1>>>pF1KB5331 415 - 415 aa - 415 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3986+/-0.000484; mu= 6.8383+/- 0.030
mean_var=175.5164+/-38.129, 0's: 0 Z-trim(114.3): 95 B-trim: 303 in 1/50
Lambda= 0.096809
statistics sampled from 23917 (24012) to 23917 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.282), width: 16
Scan time: 9.010
The best scores are: opt bits E(85289)
NP_001034672 (OMIM: 605926) PRKCA-binding protein ( 415) 2709 391.2 2.5e-108
NP_001034673 (OMIM: 605926) PRKCA-binding protein ( 415) 2709 391.2 2.5e-108
NP_036539 (OMIM: 605926) PRKCA-binding protein [Ho ( 415) 2709 391.2 2.5e-108
XP_016884580 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 327) 2132 310.5 3.8e-84
XP_016884581 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 1960 286.6 7.3e-77
XP_016884579 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 385) 1960 286.6 7.3e-77
XP_016884582 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_006724442 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_016884583 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_006724443 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 287) 1877 274.9 1.8e-73
XP_011528819 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 397) 1658 244.4 3.7e-64
XP_016884584 (OMIM: 605926) PREDICTED: PRKCA-bindi ( 334) 1046 158.9 1.8e-38
>>NP_001034672 (OMIM: 605926) PRKCA-binding protein [Hom (415 aa)
initn: 2709 init1: 2709 opt: 2709 Z-score: 2065.9 bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
310 320 330 340 350 360
370 380 390 400 410
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
370 380 390 400 410
>>NP_001034673 (OMIM: 605926) PRKCA-binding protein [Hom (415 aa)
initn: 2709 init1: 2709 opt: 2709 Z-score: 2065.9 bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
310 320 330 340 350 360
370 380 390 400 410
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
370 380 390 400 410
>>NP_036539 (OMIM: 605926) PRKCA-binding protein [Homo s (415 aa)
initn: 2709 init1: 2709 opt: 2709 Z-score: 2065.9 bits: 391.2 E(85289): 2.5e-108
Smith-Waterman score: 2709; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KB5 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPI
310 320 330 340 350 360
370 380 390 400 410
pF1KB5 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
370 380 390 400 410
>>XP_016884580 (OMIM: 605926) PREDICTED: PRKCA-binding p (327 aa)
initn: 2132 init1: 2132 opt: 2132 Z-score: 1631.7 bits: 310.5 E(85289): 3.8e-84
Smith-Waterman score: 2132; 100.0% identity (100.0% similar) in 327 aa overlap (89-415:1-327)
60 70 80 90 100 110
pF1KB5 ALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVL
::::::::::::::::::::::::::::::
XP_016 MIQEVKGEVTIHYNKLQADPKQGMSLDIVL
10 20 30
120 130 140 150 160 170
pF1KB5 KKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFY
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 ELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTY
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 LNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLIL
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 RCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVF
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB5 PIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
280 290 300 310 320
>>XP_016884581 (OMIM: 605926) PREDICTED: PRKCA-binding p (385 aa)
initn: 1950 init1: 1950 opt: 1960 Z-score: 1500.9 bits: 286.6 E(85289): 7.3e-77
Smith-Waterman score: 1960; 95.3% identity (96.8% similar) in 317 aa overlap (99-415:70-385)
70 80 90 100 110 120
pF1KB5 EITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
.: . :..: . ::::::::::::
XP_016 SLLLEGLSLGSVETLRLKSWTAASSPLDRPLHIMDQSLRPREGAAAP-VLKKVKHRLVEN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
280 290 300 310 320 330
370 380 390 400 410
pF1KB5 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
340 350 360 370 380
>>XP_016884579 (OMIM: 605926) PREDICTED: PRKCA-binding p (385 aa)
initn: 1950 init1: 1950 opt: 1960 Z-score: 1500.9 bits: 286.6 E(85289): 7.3e-77
Smith-Waterman score: 1960; 95.3% identity (96.8% similar) in 317 aa overlap (99-415:70-385)
70 80 90 100 110 120
pF1KB5 EITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQADPKQGMSLDIVLKKVKHRLVEN
.: . :..: . ::::::::::::
XP_016 SLLLEGLSLGSVETLRLKSWTAASSPLDRPLHIMDQSLRPREGAAAP-VLKKVKHRLVEN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVFSVIGVREPQPAASEAFVKFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIKKYLDVKFEYLSYCLKVKEMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARF
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMRKDVLEKMELLDQKHVQDIVFQLQRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTT
280 290 300 310 320 330
370 380 390 400 410
pF1KB5 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAYGLNQEEFTDGEEEEEEEDTAAGEPSRDTRGAAGPLDKGGSWCDS
340 350 360 370 380
>>XP_016884582 (OMIM: 605926) PREDICTED: PRKCA-binding p (287 aa)
initn: 1877 init1: 1877 opt: 1877 Z-score: 1439.9 bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)
100 110 120 130 140 150
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELER
10 20 30
160 170 180 190 200 210
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
220 230 240 250 260 270
400 410
pF1KB5 TRGAAGPLDKGGSWCDS
:::::::::::::::::
XP_016 TRGAAGPLDKGGSWCDS
280
>>XP_006724442 (OMIM: 605926) PREDICTED: PRKCA-binding p (287 aa)
initn: 1877 init1: 1877 opt: 1877 Z-score: 1439.9 bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)
100 110 120 130 140 150
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
::::::::::::::::::::::::::::::
XP_006 MSSGTADALGLSRAILCNDGLVKRLEELER
10 20 30
160 170 180 190 200 210
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
220 230 240 250 260 270
400 410
pF1KB5 TRGAAGPLDKGGSWCDS
:::::::::::::::::
XP_006 TRGAAGPLDKGGSWCDS
280
>>XP_016884583 (OMIM: 605926) PREDICTED: PRKCA-binding p (287 aa)
initn: 1877 init1: 1877 opt: 1877 Z-score: 1439.9 bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)
100 110 120 130 140 150
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
::::::::::::::::::::::::::::::
XP_016 MSSGTADALGLSRAILCNDGLVKRLEELER
10 20 30
160 170 180 190 200 210
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
220 230 240 250 260 270
400 410
pF1KB5 TRGAAGPLDKGGSWCDS
:::::::::::::::::
XP_016 TRGAAGPLDKGGSWCDS
280
>>XP_006724443 (OMIM: 605926) PREDICTED: PRKCA-binding p (287 aa)
initn: 1877 init1: 1877 opt: 1877 Z-score: 1439.9 bits: 274.9 E(85289): 1.8e-73
Smith-Waterman score: 1877; 100.0% identity (100.0% similar) in 287 aa overlap (129-415:1-287)
100 110 120 130 140 150
pF1KB5 IHYNKLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELER
::::::::::::::::::::::::::::::
XP_006 MSSGTADALGLSRAILCNDGLVKRLEELER
10 20 30
160 170 180 190 200 210
pF1KB5 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYSCI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQLQRLV
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 STMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAAGEPSRD
220 230 240 250 260 270
400 410
pF1KB5 TRGAAGPLDKGGSWCDS
:::::::::::::::::
XP_006 TRGAAGPLDKGGSWCDS
280
415 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:28:16 2016 done: Thu Nov 3 22:28:18 2016
Total Scan time: 9.010 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]