Result of FASTA (ccds) for
pF1KB5278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5278, 375 aa
1>>>pF1KB5278 375 - 375 aa - 375 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4567+/-0.000903; mu= 15.0229+/- 0.054
mean_var=56.0677+/-10.958, 0's: 0 Z-trim(104.4): 51 B-trim: 3 in 1/50
Lambda= 0.171284
statistics sampled from 7831 (7885) to 7831 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.242), width: 16
Scan time: 2.760
The best scores are: opt bits E(32554)
CCDS492.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 375) 2495 624.8 3.7e-179
CCDS494.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 390) 2228 558.8 2.8e-159
CCDS497.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 359) 2136 536.1 1.8e-152
CCDS498.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 413) 2043 513.1 1.7e-145
CCDS496.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 429) 2043 513.1 1.8e-145
CCDS493.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 444) 2043 513.1 1.8e-145
CCDS57989.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 344) 1834 461.5 5.1e-130
CCDS495.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 277) 1658 418.0 5.1e-117
CCDS57988.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 345) 1658 418.0 6.3e-117
CCDS57990.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 261) 1299 329.2 2.5e-90
CCDS57994.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 185) 1121 285.2 3.1e-77
CCDS57993.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 201) 1117 284.2 6.7e-77
CCDS500.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 155) 887 227.4 6.7e-60
CCDS57991.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 186) 870 223.2 1.5e-58
CCDS42705.1 ST3GAL5 gene_id:8869|Hs108|chr2 ( 395) 789 203.3 3.2e-52
CCDS1986.2 ST3GAL5 gene_id:8869|Hs108|chr2 ( 418) 789 203.3 3.3e-52
CCDS8474.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 329) 700 181.2 1.1e-45
CCDS58194.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 332) 700 181.2 1.1e-45
CCDS58193.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 333) 700 181.2 1.1e-45
CCDS2933.1 ST3GAL6 gene_id:10402|Hs108|chr3 ( 331) 667 173.1 3.2e-43
CCDS74968.1 ST3GAL6 gene_id:10402|Hs108|chr3 ( 384) 667 173.1 3.7e-43
CCDS499.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 170) 620 161.4 5.3e-40
CCDS53310.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 139) 528 138.7 3.1e-33
CCDS59452.1 ST3GAL6 gene_id:10402|Hs108|chr3 ( 213) 446 118.4 5.8e-27
CCDS57992.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 101) 302 82.8 1.5e-16
CCDS6373.1 ST3GAL1 gene_id:6482|Hs108|chr8 ( 340) 306 83.9 2.3e-16
CCDS10890.1 ST3GAL2 gene_id:6483|Hs108|chr16 ( 350) 290 79.9 3.7e-15
CCDS2073.1 ST6GAL2 gene_id:84620|Hs108|chr2 ( 529) 261 72.8 7.8e-13
CCDS11748.1 ST6GALNAC1 gene_id:55808|Hs108|chr17 ( 600) 255 71.3 2.5e-12
CCDS11747.1 ST6GALNAC2 gene_id:10610|Hs108|chr17 ( 374) 232 65.6 8.1e-11
>>CCDS492.1 ST3GAL3 gene_id:6487|Hs108|chr1 (375 aa)
initn: 2495 init1: 2495 opt: 2495 Z-score: 3329.9 bits: 624.8 E(32554): 3.7e-179
Smith-Waterman score: 2495; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
310 320 330 340 350 360
370
pF1KB5 KLVKARVITDLSSGI
:::::::::::::::
CCDS49 KLVKARVITDLSSGI
370
>>CCDS494.1 ST3GAL3 gene_id:6487|Hs108|chr1 (390 aa)
initn: 2228 init1: 2228 opt: 2228 Z-score: 2973.0 bits: 558.8 E(32554): 2.8e-159
Smith-Waterman score: 2450; 95.9% identity (96.2% similar) in 390 aa overlap (1-375:1-390)
10 20 30 40
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS---------------NSVVLS
::::::::::::::::::::::::::::::::::::::: .:::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 FDSAGQTLGSEYDRLGFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKP
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 APMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGN
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GGVLANKSLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB5 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 FVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB5 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIK
310 320 330 340 350 360
350 360 370
pF1KB5 ESWTHNIQREKEFLRKLVKARVITDLSSGI
::::::::::::::::::::::::::::::
CCDS49 ESWTHNIQREKEFLRKLVKARVITDLSSGI
370 380 390
>>CCDS497.1 ST3GAL3 gene_id:6487|Hs108|chr1 (359 aa)
initn: 2136 init1: 2136 opt: 2136 Z-score: 2850.7 bits: 536.1 E(32554): 1.8e-152
Smith-Waterman score: 2352; 95.5% identity (95.7% similar) in 375 aa overlap (1-375:1-359)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::: .::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
10 20 30 40
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
290 300 310 320 330 340
370
pF1KB5 KLVKARVITDLSSGI
:::::::::::::::
CCDS49 KLVKARVITDLSSGI
350
>>CCDS498.1 ST3GAL3 gene_id:6487|Hs108|chr1 (413 aa)
initn: 2293 init1: 2040 opt: 2043 Z-score: 2725.5 bits: 513.1 E(32554): 1.7e-145
Smith-Waterman score: 2196; 83.2% identity (83.5% similar) in 423 aa overlap (7-375:7-413)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::: .::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
10 20 30 40
70
pF1KB5 GFLLNLDSKL--------------------------------------------------
::::::::::
CCDS49 GFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
50 60 70 80 90 100
80 90 100 110 120
pF1KB5 ----PAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
110 120 130 140 150 160
130 140 150 160 170 180
pF1KB5 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB5 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB5 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB5 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
350 360 370 380 390 400
370
pF1KB5 VITDLSSGI
:::::::::
CCDS49 VITDLSSGI
410
>>CCDS496.1 ST3GAL3 gene_id:6487|Hs108|chr1 (429 aa)
initn: 2481 init1: 2040 opt: 2043 Z-score: 2725.2 bits: 513.1 E(32554): 1.8e-145
Smith-Waterman score: 2238; 86.7% identity (86.7% similar) in 407 aa overlap (23-375:23-429)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
70
pF1KB5 GFLLNLDSKL--------------------------------------------------
::::::::::
CCDS49 GFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFL
70 80 90 100 110 120
80 90 100 110 120
pF1KB5 ----PAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KLPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPP
130 140 150 160 170 180
130 140 150 160 170 180
pF1KB5 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 FGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVR
190 200 210 220 230 240
190 200 210 220 230 240
pF1KB5 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKE
250 260 270 280 290 300
250 260 270 280 290 300
pF1KB5 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVA
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB5 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKAR
370 380 390 400 410 420
370
pF1KB5 VITDLSSGI
:::::::::
CCDS49 VITDLSSGI
>>CCDS493.1 ST3GAL3 gene_id:6487|Hs108|chr1 (444 aa)
initn: 2290 init1: 2040 opt: 2043 Z-score: 2725.0 bits: 513.1 E(32554): 1.8e-145
Smith-Waterman score: 2110; 85.7% identity (86.2% similar) in 391 aa overlap (39-375:54-444)
10 20 30 40 50 60
pF1KB5 NLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRLGFLLNLDS
..::::::::::::::::::::::::::::
CCDS49 YYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLSFDSAGQTLGSEYDRLGFLLNLDS
30 40 50 60 70 80
70
pF1KB5 KL------------------------------------------------------PAEL
:: ::::
CCDS49 KLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEILKSLSEDTAFALGFLKLPRPAEL
90 100 110 120 130 140
80 90 100 110 120 130
pF1KB5 ATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 ATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDN
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB5 LIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIVVRLNSAPVKG
210 220 230 240 250 260
200 210 220 230 240 250
pF1KB5 FEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 FEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGF
270 280 290 300 310 320
260 270 280 290 300 310
pF1KB5 WKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 WKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGC
330 340 350 360 370 380
320 330 340 350 360 370
pF1KB5 DEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 DEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSG
390 400 410 420 430 440
pF1KB5 I
:
CCDS49 I
>--
initn: 266 init1: 264 opt: 264 Z-score: 349.1 bits: 73.5 E(32554): 4e-13
Smith-Waterman score: 264; 97.5% identity (100.0% similar) in 40 aa overlap (1-40:1-40)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
:::::::::::::::::::::::::::::::::::::::.
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSSKYSHSSSPQEKPVADSVVLS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
CCDS49 FDSAGQTLGSEYDRLGFLLNLDSKLSPRTLCTVVFGLDCILESPGEPKKLLMPASHPLEI
70 80 90 100 110 120
>>CCDS57989.1 ST3GAL3 gene_id:6487|Hs108|chr1 (344 aa)
initn: 2275 init1: 1834 opt: 1834 Z-score: 2447.7 bits: 461.5 E(32554): 5.1e-130
Smith-Waterman score: 2217; 91.7% identity (91.7% similar) in 375 aa overlap (1-375:1-344)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
:::::::::: :::::::::::::::::::
CCDS57 GFLLNLDSKL-------------------------------FSKPAPMFLDDSFRKWARI
70 80
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
270 280 290 300 310 320
370
pF1KB5 KLVKARVITDLSSGI
:::::::::::::::
CCDS57 KLVKARVITDLSSGI
330 340
>>CCDS495.1 ST3GAL3 gene_id:6487|Hs108|chr1 (277 aa)
initn: 1658 init1: 1658 opt: 1658 Z-score: 2214.3 bits: 418.0 E(32554): 5.1e-117
Smith-Waterman score: 1658; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:1-249)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
:::::::::
CCDS49 YIVYKERVSWTHNIQREKEFLRKLVKARVITDLSSGI
250 260 270
>>CCDS57988.1 ST3GAL3 gene_id:6487|Hs108|chr1 (345 aa)
initn: 1658 init1: 1658 opt: 1658 Z-score: 2212.7 bits: 418.0 E(32554): 6.3e-117
Smith-Waterman score: 2218; 92.0% identity (92.0% similar) in 375 aa overlap (1-375:1-345)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
:::::::: ::::::::::::::::::::::
CCDS57 YIVYKERV------------------------------EAAFTLIGLPFNNGLMGRGNIP
250 260 270
310 320 330 340 350 360
pF1KB5 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 TLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAAIKESWTHNIQREKEFLR
280 290 300 310 320 330
370
pF1KB5 KLVKARVITDLSSGI
:::::::::::::::
CCDS57 KLVKARVITDLSSGI
340
>>CCDS57990.1 ST3GAL3 gene_id:6487|Hs108|chr1 (261 aa)
initn: 1299 init1: 1299 opt: 1299 Z-score: 1735.3 bits: 329.2 E(32554): 2.5e-90
Smith-Waterman score: 1515; 93.2% identity (93.6% similar) in 249 aa overlap (1-249:1-233)
10 20 30 40 50 60
pF1KB5 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
::::::::::::::::::::::::::::::::::::::: .::::
CCDS57 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDS----------------KYDRL
10 20 30 40
70 80 90 100 110 120
pF1KB5 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GFLLNLDSKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 REFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDD
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 YDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 YIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIP
:::::::::
CCDS57 YIVYKERVSWTHNIQREKEFLRKLVKARVITDLSSGI
230 240 250 260
375 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:23:31 2016 done: Sat Nov 5 12:23:31 2016
Total Scan time: 2.760 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]