Result of FASTA (omim) for
pF1KB5268
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5268, 368 aa
1>>>pF1KB5268 368 - 368 aa - 368 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9239+/-0.000281; mu= 12.5154+/- 0.018
mean_var=178.8689+/-39.343, 0's: 0 Z-trim(123.8): 50 B-trim: 4658 in 2/56
Lambda= 0.095897
statistics sampled from 44314 (44394) to 44314 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.521), width: 16
Scan time: 9.430
The best scores are: opt bits E(85289)
NP_543141 (OMIM: 606917) probable G-protein couple ( 368) 2464 352.3 1e-96
XP_016857927 (OMIM: 606916) PREDICTED: probable G- ( 451) 346 59.4 1.9e-08
NP_114142 (OMIM: 606916) probable G-protein couple ( 451) 346 59.4 1.9e-08
NP_000862 (OMIM: 601109) 5-hydroxytryptamine recep ( 440) 235 44.0 0.00077
XP_005253267 (OMIM: 118445) PREDICTED: gastrin/cho ( 516) 227 43.0 0.0018
XP_016877086 (OMIM: 607970) PREDICTED: probable G- ( 494) 221 42.1 0.0032
NP_072093 (OMIM: 607970) probable G-protein couple ( 494) 221 42.1 0.0032
XP_016877088 (OMIM: 607970) PREDICTED: probable G- ( 494) 221 42.1 0.0032
XP_016877087 (OMIM: 607970) PREDICTED: probable G- ( 494) 221 42.1 0.0032
XP_016877085 (OMIM: 607970) PREDICTED: probable G- ( 494) 221 42.1 0.0032
>>NP_543141 (OMIM: 606917) probable G-protein coupled re (368 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 1857.5 bits: 352.3 E(85289): 1e-96
Smith-Waterman score: 2464; 99.5% identity (99.7% similar) in 368 aa overlap (1-368:1-368)
10 20 30 40 50 60
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPGLRDALYLAHLCVVDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPGLRDALYLAHLCVVDLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALLPACTLGVAALGLARYRLIVHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 AAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALLPACTLGVAALGLARYRLIVHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LRPGSRPPPVLVLTAVWAAAGLLGALSLLGPPPAPPPAPARCSVLAGGLGPFRPLWALLA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_543 LRPGSRPPPVLVLTAVWAAAGLLGALSLLGTPPAPPPAPARCSVLAGGLGPFRPLWALLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 FALPALLLLGAYGGIFVVARRAALRPPRPARGSRLRSDSLDSRLSILPPLRPRLPGGKAA
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_543 FALPALLLLGAYGGIFVVARRAALRPPRPARGSRLHSDSLDSRLSILPPLRPRLPGGKAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LAPALAVGQFAACWLPYGCACLAPAARAAEAEAAVTWVAYSAFAAHPFLYGLLQRPVRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 LAPALAVGQFAACWLPYGCACLAPAARAAEAEAAVTWVAYSAFAAHPFLYGLLQRPVRLA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LGRLSRRALPGPVRACTPQAWHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_543 LGRLSRRALPGPVRACTPQAWHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQ
310 320 330 340 350 360
pF1KB5 GPPESSLS
::::::::
NP_543 GPPESSLS
>>XP_016857927 (OMIM: 606916) PREDICTED: probable G-prot (451 aa)
initn: 568 init1: 156 opt: 346 Z-score: 272.8 bits: 59.4 E(85289): 1.9e-08
Smith-Waterman score: 568; 33.9% identity (61.2% similar) in 387 aa overlap (15-366:43-423)
10 20 30 40
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPG
:..:.. .... :. ::.:...:. .::.
XP_016 SSTLGRVPQTPGPSTASGVPEVGLRDVASESVALFFMLLLDLTAVAGNAAVMAVIAKTPA
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB5 LRDALYLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALLPACTL
:: ... :::.:::::: ..:::..:.. . .. .: . :: :::. .. :
XP_016 LRKFVFVFHLCLVDLLAALTLMPLAMLSSSAL-FDHALFGEVACRLYLFLSVCFVSLAIL
80 90 100 110 120 130
110 120 130 140 150
pF1KB5 GVAALGLARYRLIVHPLRPGSRPPPVLV---LTAVWAAAGLLGALSLLGP---PPAPPPA
.:.:... :: .:::.: : :: :..::. : .... .:: . : .
XP_016 SVSAINVERYYYVVHPMRYEVRMTLGLVASVLVGVWVKALAMASVPVLGRVSWEEGAPSV
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB5 PARCSVL---AGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRP-PRPA--RG
: ::. .. : ..:.: : :: ::.: .: ..: ::: ::.. : :. .
XP_016 PPGCSLQWSHSAYCQLFVVVFAVLYFLLPLLLILVVYCSMFRVARVAAMQHGPLPTWMET
200 210 220 230 240 250
220 230 240 250
pF1KB5 SRLRSDSLDSRLSIL-----PPLRPR--LPGGKAALAPALAVG-QFAACWLPY-----GC
: ::.::.:: ... : :. . :::::.. :::: :: :::::
XP_016 PRQRSESLSSRSTMVTSSGAPQTTPHRTFGGGKAAVV-LLAVGGQFLLCWLPYFSFHLYV
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB5 ACLAPAARAAEAEAAVTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRAL----PGP---
: : ....:..:::..: :...::.:: :.: .: :.::.. . :.:
XP_016 ALSAQPISTGQVESVVTWIGYFCFTSNPFFYGCLNRQIR---GELSKQFVCFFKPAPEEE
320 330 340 350 360
320 330 340 350 360
pF1KB5 VRACTPQAWHPRALLQCLQR---PPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
.: . .. . .:: :: : :. . : .:.: : . : :. : :.:
XP_016 LRLPSREGSIEENFLQFLQGTGCPSESWVSRPLPSPKQEPPAVDFRIPG-QIAEETSEFL
370 380 390 400 410 420
XP_016 EQQLTSDIIMSDSYLRPAASPRLES
430 440 450
>>NP_114142 (OMIM: 606916) probable G-protein coupled re (451 aa)
initn: 568 init1: 156 opt: 346 Z-score: 272.8 bits: 59.4 E(85289): 1.9e-08
Smith-Waterman score: 568; 33.9% identity (61.2% similar) in 387 aa overlap (15-366:43-423)
10 20 30 40
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPG
:..:.. .... :. ::.:...:. .::.
NP_114 SSTLGRVPQTPGPSTASGVPEVGLRDVASESVALFFMLLLDLTAVAGNAAVMAVIAKTPA
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB5 LRDALYLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALLPACTL
:: ... :::.:::::: ..:::..:.. . .. .: . :: :::. .. :
NP_114 LRKFVFVFHLCLVDLLAALTLMPLAMLSSSAL-FDHALFGEVACRLYLFLSVCFVSLAIL
80 90 100 110 120 130
110 120 130 140 150
pF1KB5 GVAALGLARYRLIVHPLRPGSRPPPVLV---LTAVWAAAGLLGALSLLGP---PPAPPPA
.:.:... :: .:::.: : :: :..::. : .... .:: . : .
NP_114 SVSAINVERYYYVVHPMRYEVRMTLGLVASVLVGVWVKALAMASVPVLGRVSWEEGAPSV
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB5 PARCSVL---AGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRP-PRPA--RG
: ::. .. : ..:.: : :: ::.: .: ..: ::: ::.. : :. .
NP_114 PPGCSLQWSHSAYCQLFVVVFAVLYFLLPLLLILVVYCSMFRVARVAAMQHGPLPTWMET
200 210 220 230 240 250
220 230 240 250
pF1KB5 SRLRSDSLDSRLSIL-----PPLRPR--LPGGKAALAPALAVG-QFAACWLPY-----GC
: ::.::.:: ... : :. . :::::.. :::: :: :::::
NP_114 PRQRSESLSSRSTMVTSSGAPQTTPHRTFGGGKAAVV-LLAVGGQFLLCWLPYFSFHLYV
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB5 ACLAPAARAAEAEAAVTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRAL----PGP---
: : ....:..:::..: :...::.:: :.: .: :.::.. . :.:
NP_114 ALSAQPISTGQVESVVTWIGYFCFTSNPFFYGCLNRQIR---GELSKQFVCFFKPAPEEE
320 330 340 350 360
320 330 340 350 360
pF1KB5 VRACTPQAWHPRALLQCLQR---PPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
.: . .. . .:: :: : :. . : .:.: : . : :. : :.:
NP_114 LRLPSREGSIEENFLQFLQGTGCPSESWVSRPLPSPKQEPPAVDFRIPG-QIAEETSEFL
370 380 390 400 410 420
NP_114 EQQLTSDIIMSDSYLRPAASPRLES
430 440 450
>>NP_000862 (OMIM: 601109) 5-hydroxytryptamine receptor (440 aa)
initn: 95 init1: 55 opt: 235 Z-score: 189.9 bits: 44.0 E(85289): 0.00077
Smith-Waterman score: 320; 28.6% identity (50.2% similar) in 402 aa overlap (2-361:9-387)
10 20 30 40
pF1KB5 MANST---GLNASEVAGSLGLILAAVVEVGALLG--NGALLVVVLRTPGLRDA
:::: : . . :. : . ::. : :: . :. :.... :.::..
NP_000 MVPEPGPTANSTPAWGAGPPSAPGGSGWVAAALCVVIALTAAANSLLIALICTQPALRNT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 --LYLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALLPACTLGV
..:. : . ::... .:: ..: : :: :. . : ... : :..
NP_000 SNFFLVSLFTSDLMVGLVVMPPAMLNA---LYGRWVLARGLCLLWTAFDVMCCSASILNL
70 80 90 100 110
110 120 130 140 150
pF1KB5 AALGLARYRLIVHPLRPGSRPPPVLVLTAV---WAAAGLLGALSLL-GPPP---APPPAP
..: :: ::. ::: : :. .:. : :. :.: . : :: : : ::.:
NP_000 CLISLDRYLLILSPLRYKLRMTPLRALALVLGAWSLAALASFLPLLLGWHELGHARPPVP
120 130 140 150 160 170
160 170 180 190 200
pF1KB5 ARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAA----------------
..: .::. :: . . :.: ::. . .: :...::. :
NP_000 GQCRLLAS--LPFVLVASGLTFFLPSGAICFTYCRILLAARKQAVQVASLTTGMASQASE
180 190 200 210 220 230
210 220 230 240 250
pF1KB5 -LRPPRPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYG----
:. :: : . .: ::: : : ::.:. .. .:.: . :::.
NP_000 TLQVPRTPRPG---VESADSRRLATKHSRKAL---KASLTLGILLGMFFVTWLPFFVANI
240 250 260 270 280
260 270 280 290 300 310
pF1KB5 ----CACLAPAARAAEAEAAVTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVR
: :..:. ..::..: . .:..: :..: . ::::. :: :
NP_000 VQAVCDCISPGL-----FDVLTWLGYCNSTMNPIIYPLFMRDFKRALGRF----LPCP--
290 300 310 320 330
320 330 340 350 360
pF1KB5 ACTPQAWHPRALLQCLQRPPEGPAVGPSEA---PEQTPELAGGRSPAYQGPPESSLS
: :. . :. :: : : : : . . : : .:
NP_000 RC-PRERQASLASPSLRTSHSGPRPGLSLQQVLPLPLPPDSDSDSDAGSGGSSGLRLTAQ
340 350 360 370 380 390
NP_000 LLLPGEATQDPPLPTRAAAAVNFFNIDPAEPELRPHPLGIPTN
400 410 420 430 440
>>XP_005253267 (OMIM: 118445) PREDICTED: gastrin/cholecy (516 aa)
initn: 133 init1: 59 opt: 227 Z-score: 183.1 bits: 43.0 E(85289): 0.0018
Smith-Waterman score: 227; 25.6% identity (48.0% similar) in 379 aa overlap (6-355:46-399)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGAL
: .. :. .. . : ::. . .. :: .
XP_005 GPGASLCRPGAPLLNSSSVGNLSCEPPRIRGAGTRELELAIRITLYAVIFLMSVGGNMLI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB5 LVVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLGPAPCRAARF
.::. . :: . .: : : ::: :.. ::. :: : .: .: . :.:. .
XP_005 IVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLL---PNLMGTFIFGTVICKAVSY
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB5 LSAALLPACTLGVAALGLARYRLIVHPLRP---GSRPPPVLVLTAVWAAAGLLGALSLLG
: .. . . ::...:..: :: : .::. .: . :..:.: .:: :.
XP_005 LMGVSVSVSTLSLVAIALERYSAICRPLQARVWQTRSHAARVIVATWLLSGL-----LMV
140 150 160 170 180
160 170 180 190 200
pF1KB5 PPPA----PPPAPA--RCSVLAGGLGPFRPLWA----LLAFALPALLLLGAYGGIFVVAR
: :. : .: .: : . : :. :: : .:.... ::: ...:
XP_005 PYPVYTVVQPVGPRVLQC-VHRWPSARVRQTWSVLLLLLLFFIPGVVMAVAYG---LISR
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB5 RAALRPPRPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCA
. : : :. .:: :: . . :::: . :. ... : : .
XP_005 ELYL-------GLRFDGDS-DSDSQSRVRNQGGLPGGAGPREQNLGEAELWRATGPAGVG
250 260 270 280 290
270 280 290 300
pF1KB5 CLAPAARAAEA-EAAVTWVAYS-------------AFAAHPFLYGLLQRPVRLALGRLSR
.:. . : ..: : ...:::. : ... : :
XP_005 GTEMKVRVRRKLEMELSWERRSGGDWAGDWGDSPFSLTAHPLCSGAVHQNGRC---RPET
300 310 320 330 340 350
310 320 330 340 350 360
pF1KB5 RALPGPVRACTPQAWHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESS
:. .: : . : :. ::. : : :. :: :
XP_005 GAVGEDSDGCYVQLPRSRPALELTALTAPGPGSGSR--PTQAKLLAKKRVVRMLLVIVVL
360 370 380 390 400 410
pF1KB5 LS
XP_005 FFLCWLPVYSANTWRAFDGPGAHRALSGAPISFIHLLSYASACVNPLVYCFMHRRFRQAC
420 430 440 450 460 470
>>XP_016877086 (OMIM: 607970) PREDICTED: probable G-prot (494 aa)
initn: 166 init1: 69 opt: 221 Z-score: 178.9 bits: 42.1 E(85289): 0.0032
Smith-Waterman score: 221; 24.9% identity (51.8% similar) in 313 aa overlap (7-303:97-400)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALL
:. . .... .:.: . ...: :: :..
XP_016 PGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSL-GNCAVM
70 80 90 100 110 120
40 50 60 70 80
pF1KB5 VVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAA-PPPGLGRVRLGPAP----CR
:... :: . .. : . :::.: .: ..: ::: . . .: :
XP_016 GVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCA
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB5 AARFLSAALLPACTLGVAALGLARYRLIVHPLRPG-SRPPPVLVLTAVWAAA-GLLGALS
:.::.:. . . ::.:: ..: :: ::.: : .: . .:...: .: :.
XP_016 ASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGFSLPWE
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB5 LLGPPPAPPPAPARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRPP
::: : : . . : : : : :. :. . :... : :.. .
XP_016 LLGAPRELAAAQS----FHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHIC
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB5 RPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCACLAPAAR
. .: : .: ... .: . ..: . . . :: :: : :::
XP_016 KTVRLSDVRVRPVNTYARVLRFFSEV----RTATTVLIMIVFVICCWGPYCFLVLLAAAR
310 320 330 340 350
270 280 290 300 310 320
pF1KB5 AAEAEAA-------VTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQA
:.. : ..:.... : .: .:.. . . . :::
XP_016 QAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPS
360 370 380 390 400 410
330 340 350 360
pF1KB5 WHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
XP_016 QGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEP
420 430 440 450 460 470
>>NP_072093 (OMIM: 607970) probable G-protein coupled re (494 aa)
initn: 166 init1: 69 opt: 221 Z-score: 178.9 bits: 42.1 E(85289): 0.0032
Smith-Waterman score: 221; 24.9% identity (51.8% similar) in 313 aa overlap (7-303:97-400)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALL
:. . .... .:.: . ...: :: :..
NP_072 PGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSL-GNCAVM
70 80 90 100 110 120
40 50 60 70 80
pF1KB5 VVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAA-PPPGLGRVRLGPAP----CR
:... :: . .. : . :::.: .: ..: ::: . . .: :
NP_072 GVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCA
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB5 AARFLSAALLPACTLGVAALGLARYRLIVHPLRPG-SRPPPVLVLTAVWAAA-GLLGALS
:.::.:. . . ::.:: ..: :: ::.: : .: . .:...: .: :.
NP_072 ASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGFSLPWE
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB5 LLGPPPAPPPAPARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRPP
::: : : . . : : : : :. :. . :... : :.. .
NP_072 LLGAPRELAAAQS----FHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHIC
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB5 RPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCACLAPAAR
. .: : .: ... .: . ..: . . . :: :: : :::
NP_072 KTVRLSDVRVRPVNTYARVLRFFSEV----RTATTVLIMIVFVICCWGPYCFLVLLAAAR
310 320 330 340 350
270 280 290 300 310 320
pF1KB5 AAEAEAA-------VTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQA
:.. : ..:.... : .: .:.. . . . :::
NP_072 QAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPS
360 370 380 390 400 410
330 340 350 360
pF1KB5 WHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
NP_072 QGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEP
420 430 440 450 460 470
>>XP_016877088 (OMIM: 607970) PREDICTED: probable G-prot (494 aa)
initn: 166 init1: 69 opt: 221 Z-score: 178.9 bits: 42.1 E(85289): 0.0032
Smith-Waterman score: 221; 24.9% identity (51.8% similar) in 313 aa overlap (7-303:97-400)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALL
:. . .... .:.: . ...: :: :..
XP_016 PGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSL-GNCAVM
70 80 90 100 110 120
40 50 60 70 80
pF1KB5 VVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAA-PPPGLGRVRLGPAP----CR
:... :: . .. : . :::.: .: ..: ::: . . .: :
XP_016 GVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCA
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB5 AARFLSAALLPACTLGVAALGLARYRLIVHPLRPG-SRPPPVLVLTAVWAAA-GLLGALS
:.::.:. . . ::.:: ..: :: ::.: : .: . .:...: .: :.
XP_016 ASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGFSLPWE
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB5 LLGPPPAPPPAPARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRPP
::: : : . . : : : : :. :. . :... : :.. .
XP_016 LLGAPRELAAAQS----FHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHIC
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB5 RPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCACLAPAAR
. .: : .: ... .: . ..: . . . :: :: : :::
XP_016 KTVRLSDVRVRPVNTYARVLRFFSEV----RTATTVLIMIVFVICCWGPYCFLVLLAAAR
310 320 330 340 350
270 280 290 300 310 320
pF1KB5 AAEAEAA-------VTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQA
:.. : ..:.... : .: .:.. . . . :::
XP_016 QAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPS
360 370 380 390 400 410
330 340 350 360
pF1KB5 WHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
XP_016 QGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEP
420 430 440 450 460 470
>>XP_016877087 (OMIM: 607970) PREDICTED: probable G-prot (494 aa)
initn: 166 init1: 69 opt: 221 Z-score: 178.9 bits: 42.1 E(85289): 0.0032
Smith-Waterman score: 221; 24.9% identity (51.8% similar) in 313 aa overlap (7-303:97-400)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALL
:. . .... .:.: . ...: :: :..
XP_016 PGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSL-GNCAVM
70 80 90 100 110 120
40 50 60 70 80
pF1KB5 VVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAA-PPPGLGRVRLGPAP----CR
:... :: . .. : . :::.: .: ..: ::: . . .: :
XP_016 GVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCA
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB5 AARFLSAALLPACTLGVAALGLARYRLIVHPLRPG-SRPPPVLVLTAVWAAA-GLLGALS
:.::.:. . . ::.:: ..: :: ::.: : .: . .:...: .: :.
XP_016 ASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGFSLPWE
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB5 LLGPPPAPPPAPARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRPP
::: : : . . : : : : :. :. . :... : :.. .
XP_016 LLGAPRELAAAQS----FHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHIC
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB5 RPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCACLAPAAR
. .: : .: ... .: . ..: . . . :: :: : :::
XP_016 KTVRLSDVRVRPVNTYARVLRFFSEV----RTATTVLIMIVFVICCWGPYCFLVLLAAAR
310 320 330 340 350
270 280 290 300 310 320
pF1KB5 AAEAEAA-------VTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQA
:.. : ..:.... : .: .:.. . . . :::
XP_016 QAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPS
360 370 380 390 400 410
330 340 350 360
pF1KB5 WHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
XP_016 QGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEP
420 430 440 450 460 470
>>XP_016877085 (OMIM: 607970) PREDICTED: probable G-prot (494 aa)
initn: 166 init1: 69 opt: 221 Z-score: 178.9 bits: 42.1 E(85289): 0.0032
Smith-Waterman score: 221; 24.9% identity (51.8% similar) in 313 aa overlap (7-303:97-400)
10 20 30
pF1KB5 MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALL
:. . .... .:.: . ...: :: :..
XP_016 PGGGGLGGSGAAREAGAAVRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSL-GNCAVM
70 80 90 100 110 120
40 50 60 70 80
pF1KB5 VVVLRTPGLRDAL--YLAHLCVVDLLAAASIMPLGLLAA-PPPGLGRVRLGPAP----CR
:... :: . .. : . :::.: .: ..: ::: . . .: :
XP_016 GVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPAAFLDLFTPPGGSAPAAAAGPWRGFCA
130 140 150 160 170 180
90 100 110 120 130 140
pF1KB5 AARFLSAALLPACTLGVAALGLARYRLIVHPLRPG-SRPPPVLVLTAVWAAA-GLLGALS
:.::.:. . . ::.:: ..: :: ::.: : .: . .:...: .: :.
XP_016 ASRFFSSCFGIVSTLSVALISLDRYCAIVRPPREKIGRRRALQLLAGAWLTALGFSLPWE
190 200 210 220 230 240
150 160 170 180 190 200
pF1KB5 LLGPPPAPPPAPARCSVLAGGLGPFRPLWALLAFALPALLLLGAYGGIFVVARRAALRPP
::: : : . . : : : : :. :. . :... : :.. .
XP_016 LLGAPRELAAAQS----FHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHIC
250 260 270 280 290 300
210 220 230 240 250 260
pF1KB5 RPARGSRLRSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLPYGCACLAPAAR
. .: : .: ... .: . ..: . . . :: :: : :::
XP_016 KTVRLSDVRVRPVNTYARVLRFFSEV----RTATTVLIMIVFVICCWGPYCFLVLLAAAR
310 320 330 340 350
270 280 290 300 310 320
pF1KB5 AAEAEAA-------VTWVAYSAFAAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQA
:.. : ..:.... : .: .:.. . . . :::
XP_016 QAQTMQAPSLLSVVAVWLTWANGAINPVIYAIRNPNISMLLGRNREEGYRTRNVDAFLPS
360 370 380 390 400 410
330 340 350 360
pF1KB5 WHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS
XP_016 QGPGLQARSRSRLRNRYANRLGACNRMSSSNPASGVAGDVAMWARKNPVVLFCREGPPEP
420 430 440 450 460 470
368 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:29:10 2016 done: Thu Nov 3 16:29:12 2016
Total Scan time: 9.430 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]