Result of FASTA (ccds) for
pF1KB5264
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5264, 312 aa
1>>>pF1KB5264 312 - 312 aa - 312 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7801+/-0.00106; mu= 12.9378+/- 0.064
mean_var=66.9978+/-13.835, 0's: 0 Z-trim(103.0): 72 B-trim: 324 in 1/49
Lambda= 0.156691
statistics sampled from 7136 (7209) to 7136 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.581), E-opt: 0.2 (0.221), width: 16
Scan time: 2.300
The best scores are: opt bits E(32554)
CCDS7905.1 HSD17B12 gene_id:51144|Hs108|chr11 ( 312) 1995 460.1 9.7e-130
CCDS10942.1 HSDL1 gene_id:83693|Hs108|chr16 ( 330) 751 178.9 4.6e-45
CCDS6716.1 HSD17B3 gene_id:3293|Hs108|chr9 ( 310) 707 169.0 4.3e-42
CCDS54046.1 HSDL1 gene_id:83693|Hs108|chr16 ( 275) 416 103.2 2.4e-22
CCDS3619.1 HSD17B11 gene_id:51170|Hs108|chr4 ( 300) 270 70.2 2.3e-12
CCDS82092.1 DHRS7B gene_id:25979|Hs108|chr17 ( 310) 270 70.2 2.3e-12
CCDS11215.1 DHRS7B gene_id:25979|Hs108|chr17 ( 325) 270 70.2 2.4e-12
CCDS81810.1 DHRS7 gene_id:51635|Hs108|chr14 ( 289) 269 69.9 2.6e-12
CCDS9743.1 DHRS7 gene_id:51635|Hs108|chr14 ( 339) 269 70.0 3e-12
CCDS9605.1 DHRS4 gene_id:10901|Hs108|chr14 ( 278) 253 66.3 3.1e-11
CCDS11315.2 DHRS11 gene_id:79154|Hs108|chr17 ( 260) 248 65.2 6.3e-11
CCDS1489.1 HSD11B1 gene_id:3290|Hs108|chr1 ( 292) 248 65.2 7e-11
CCDS3618.1 HSD17B13 gene_id:345275|Hs108|chr4 ( 300) 246 64.8 9.8e-11
>>CCDS7905.1 HSD17B12 gene_id:51144|Hs108|chr11 (312 aa)
initn: 1995 init1: 1995 opt: 1995 Z-score: 2442.7 bits: 460.1 E(32554): 9.7e-130
Smith-Waterman score: 1995; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312)
10 20 30 40 50 60
pF1KB5 MESALPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MESALPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 KGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 KIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKS
250 260 270 280 290 300
310
pF1KB5 TRAHYLKKTKKN
::::::::::::
CCDS79 TRAHYLKKTKKN
310
>>CCDS10942.1 HSDL1 gene_id:83693|Hs108|chr16 (330 aa)
initn: 612 init1: 304 opt: 751 Z-score: 922.5 bits: 178.9 E(32554): 4.6e-45
Smith-Waterman score: 751; 40.1% identity (74.6% similar) in 307 aa overlap (11-309:25-329)
10 20 30 40
pF1KB5 MESALPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGV---GNEA
: ::: .: .. . .... .:. . :..:
CCDS10 MAAVDSFYLLYREIARSCNCYMEALALVGAWYTARKSITVICDFYSLIRLHFIPRLGSRA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 GVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETR
. :.::::.:.::::::.::::::..:....::::...::. :...: . .::::
CCDS10 DLIKQYGRWAVVSGATDGIGKAYAEELASRGLNIILISRNEEKLQVVAKDIADTYKVETD
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 TIAVDFAS-EDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININI
:..::.: ..:: :. .: ..::::::::. : ::.:: .. . . . .::.::
CCDS10 IIVADFSSGREIYLPIREALKDKDVGILVNNVGVFYPYPQYFTQLSE--DKLWDIINVNI
130 140 150 160 170
170 180 190 200 210 220
pF1KB5 LSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRS
.. :...::::::::.::::..::::: :.: :. .::.:...: ::. :. :: :
CCDS10 AAASLMVHVVLPGMVERKKGAIVTISSGSCCKPTPQLAAFSASKAYLDHFSRALQYEYAS
180 190 200 210 220 230
230 240 250 260 270
pF1KB5 KGVFVQSVLPYFVATKLAK----IRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALM
::.::::..:..:::... ... . :::..... :..:.:...::.:: :...
CCDS10 KGIFVQSLIPFYVATSMTAPSNFLHRCSWLVPSPKVYAHHAVSTLGISKRTTGYWSHSIQ
240 250 260 270 280 290
280 290 300 310
pF1KB5 GSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
. . .: :... . .:.: : . :. :
CCDS10 FLFAQYMPEWLWVWGANILNRSLRKEALSCTA
300 310 320 330
>>CCDS6716.1 HSD17B3 gene_id:3293|Hs108|chr9 (310 aa)
initn: 691 init1: 345 opt: 707 Z-score: 869.2 bits: 169.0 E(32554): 4.3e-42
Smith-Waterman score: 707; 41.7% identity (71.2% similar) in 295 aa overlap (19-312:18-306)
10 20 30 40 50 60
pF1KB5 MESALPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTD
.: :: . .: . : : : .. . ..:.:::.::. :
CCDS67 MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYWKVLPKSFLR-SMGQWAVITGAGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 GIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKT
::::.:. ::::.:..::::::. .::. ...::.. .. : .::...:::..::
CCDS67 GIGKAYSFELAKRGLNVVLISRTLEKLEAIATEIERTTGRSVKIIQADFTKDDIYEHIKE
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 GLAGLEIGILVNNVGMSYEY-PEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVER
::::::::::::::: . : .::..:: :...:. :: :: :::::.: : :
CCDS67 KLAGLEIGILVNNVGMLPNLLPSHFLNAPDE---IQSLIHCNITSVVKMTQLILKHMESR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKL
.:: ::::::: ...: :: ..:::.:.:: ::. :.:::..: :..: . :: :.: .
CCDS67 QKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQVLTPYAVSTAM
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 AKIRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNK
.: . .. . . ::: ... : . ..: : : : ......: .:.: . . .. ..
CCDS67 TKYLNTNVITKTADEFVKESLNYVTIGGETCGCLAHEILAGFLSLIPAWAFYSGAF--QR
240 250 260 270 280 290
300 310
pF1KB5 STRAHYLKKTKKN
.::. : :
CCDS67 LLLTHYVAYLKLNTKVR
300 310
>>CCDS54046.1 HSDL1 gene_id:83693|Hs108|chr16 (275 aa)
initn: 552 init1: 304 opt: 416 Z-score: 514.5 bits: 103.2 E(32554): 2.4e-22
Smith-Waterman score: 492; 33.0% identity (62.1% similar) in 306 aa overlap (11-309:25-274)
10 20 30 40
pF1KB5 MESALPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGV---GNEA
: ::: .: .. . .... .:. . :..:
CCDS54 MAAVDSFYLLYREIARSCNCYMEALALVGAWYTARKSITVICDFYSLIRLHFIPRLGSRA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 GVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETR
. :.::::.:.::::::.::::::..:....::::...:: : ....:
CCDS54 DLIKQYGRWAVVSGATDGIGKAYAEELASRGLNIILISRNEEKL-QYFTQLSE-------
70 80 90 100 110
110 120 130 140 150 160
pF1KB5 TIAVDFASEDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININIL
::. :. ::.::
CCDS54 ------------DKL--------------------------WDI----------INVNIA
120
170 180 190 200 210 220
pF1KB5 SVCKMTQLVLPGMVERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSK
.. :...::::::::.::::..::::: :.: :. .::.:...: ::. :. :: ::
CCDS54 AASLMVHVVLPGMVERKKGAIVTISSGSCCKPTPQLAAFSASKAYLDHFSRALQYEYASK
130 140 150 160 170 180
230 240 250 260 270
pF1KB5 GVFVQSVLPYFVATKLAK----IRKPTLDKPSPETFVKSAIKTVGLQSRTNGYLIHALMG
:.::::..:..:::... ... . :::..... :..:.:...::.:: :...
CCDS54 GIFVQSLIPFYVATSMTAPSNFLHRCSWLVPSPKVYAHHAVSTLGISKRTTGYWSHSIQF
190 200 210 220 230 240
280 290 300 310
pF1KB5 SIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
. . .: :... . .:.: : . :. :
CCDS54 LFAQYMPEWLWVWGANILNRSLRKEALSCTA
250 260 270
>>CCDS3619.1 HSD17B11 gene_id:51170|Hs108|chr4 (300 aa)
initn: 140 init1: 91 opt: 270 Z-score: 335.5 bits: 70.2 E(32554): 2.3e-12
Smith-Waterman score: 270; 29.9% identity (62.0% similar) in 221 aa overlap (50-263:36-250)
20 30 40 50 60 70
pF1KB5 AYLALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVL
:: ...::. :::. : :.:: :.::
CCDS36 DILLLLPLLIVCSLESFVKLFIPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVL
10 20 30 40 50 60
80 90 100 110 120 130
pF1KB5 ISRSKDKLDQVSSEIKEKFKVETRTIAVDFAS-EDIYDKIKTGLAGL-EIGILVNNVGMS
. .: :...... : . ....:..:: .. ::::.. : : . ...:::::.:.
CCDS36 WDINKHGLEETAAKCK-GLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB5 YEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLPVP
: . . :. :.: ...:.:. :. ::.:.. ..: :....:..: . ::
CCDS36 YTSDLFATQDPQ----IEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB5 LLTIYSATKTFVDFFSQCLHEEYRS---KGVFVQSVLPYFVATKLAKIRKPTLDKPS--P
.: : ..: . : . : .: . :: . . : :: : . : . .: :. :
CCDS36 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLG-PTLEP
190 200 210 220 230
260 270 280 290 300 310
pF1KB5 ETFVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
: :. .. .
CCDS36 EEVVNRLMHGILTEQKMIFIPSSIAFLTTLERILPERFLAVLKRKISVKFDAVIGYKMKA
240 250 260 270 280 290
>>CCDS82092.1 DHRS7B gene_id:25979|Hs108|chr17 (310 aa)
initn: 203 init1: 120 opt: 270 Z-score: 335.3 bits: 70.2 E(32554): 2.3e-12
Smith-Waterman score: 270; 29.2% identity (62.6% similar) in 195 aa overlap (54-240:41-230)
30 40 50 60 70 80
pF1KB5 LRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRS
:.::.:.:.:: :. . : :.:: .:.
CCDS82 PLLFGCLGVFGLFRLLQWVRGKAYLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN
20 30 40 50 60 70
90 100 110 120 130
pF1KB5 KDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKTGLAGLEI-------GILVNNVGM
:... :. . ....: ... :. :. :. :: :::::.:.
CCDS82 GGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGI
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB5 SYEYPEYFLDVP-DLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLP
::. ..:. :.: :.... : .. .:. .::.:..: .: :. ::: .: .
CCDS82 SYRGT--IMDTTVDVD---KRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKMS
140 150 160 170 180
200 210 220 230 240 250
pF1KB5 VPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPETF
.:. . :.:.: .. : .::. :... . : . : .. :.:.
CCDS82 IPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMD
190 200 210 220 230 240
260 270 280 290 300 310
pF1KB5 VKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
CCDS82 TTTAQGRSPVEVAQDVLAAVGKKKKDVILADLLPSLAVYLRTLAPGLFFSLMASRARKER
250 260 270 280 290 300
>>CCDS11215.1 DHRS7B gene_id:25979|Hs108|chr17 (325 aa)
initn: 203 init1: 120 opt: 270 Z-score: 335.0 bits: 70.2 E(32554): 2.4e-12
Smith-Waterman score: 270; 29.2% identity (62.6% similar) in 195 aa overlap (54-240:56-245)
30 40 50 60 70 80
pF1KB5 LRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRS
:.::.:.:.:: :. . : :.:: .:.
CCDS11 PLLFGCLGVFGLFRLLQWVRGKAYLRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRN
30 40 50 60 70 80
90 100 110 120 130
pF1KB5 KDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKTGLAGLEI-------GILVNNVGM
:... :. . ....: ... :. :. :. :: :::::.:.
CCDS11 GGALEELIRELTASHATKVQTHKPYLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGI
90 100 110 120 130 140
140 150 160 170 180 190
pF1KB5 SYEYPEYFLDVP-DLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLP
::. ..:. :.: :.... : .. .:. .::.:..: .: :. ::: .: .
CCDS11 SYRGT--IMDTTVDVD---KRVMETNYFGPVALTKALLPSMIKRRQGHIVAISSIQGKMS
150 160 170 180 190 200
200 210 220 230 240 250
pF1KB5 VPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPETF
.:. . :.:.: .. : .::. :... . : . : .. :.:.
CCDS11 IPFRSAYAASKHATQAFFDCLRAEMEQYEIEVTVISPGYIHTNLSVNAITADGSRYGVMD
210 220 230 240 250 260
260 270 280 290 300 310
pF1KB5 VKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
CCDS11 TTTAQGRSPVEVAQDVLAAVGKKKKDVILADLLPSLAVYLRTLAPGLFFSLMASRARKER
270 280 290 300 310 320
>>CCDS81810.1 DHRS7 gene_id:51635|Hs108|chr14 (289 aa)
initn: 235 init1: 134 opt: 269 Z-score: 334.6 bits: 69.9 E(32554): 2.6e-12
Smith-Waterman score: 269; 32.5% identity (62.9% similar) in 197 aa overlap (52-241:4-193)
30 40 50 60 70 80
pF1KB5 LALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLIS
: :::...:::. : .:.: :...:: .
CCDS81 MVVW--VTGASSGIGEELAYQLSKLGVSLVLSA
10 20 30
90 100 110 120 130
pF1KB5 RSKDKLDQVSSEIKEKFKVETRTIAV------DFASEDIYDKIKTGLAGLEIGILVNNVG
: .:..:. . :. ... . : : : .:.. : : .: ::::: :
CCDS81 RRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFG-RIDILVNNGG
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 MSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLP
:: . .:. .:: : .:.:..: :.. ..:. ::: :.::..: :....: :..
CCDS81 MSQR--SLCMDT-SLD-VYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIIS
100 110 120 130 140
200 210 220 230 240 250
pF1KB5 VPLLTIYSATK-TFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPET
::: : :.: .. ::. : :..:... : : .....
CCDS81 VPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGN
150 160 170 180 190 200
260 270 280 290 300 310
pF1KB5 FVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
CCDS81 NGDQSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKMGKKR
210 220 230 240 250 260
>>CCDS9743.1 DHRS7 gene_id:51635|Hs108|chr14 (339 aa)
initn: 235 init1: 134 opt: 269 Z-score: 333.4 bits: 70.0 E(32554): 3e-12
Smith-Waterman score: 269; 32.5% identity (62.9% similar) in 197 aa overlap (52-241:54-243)
30 40 50 60 70 80
pF1KB5 LALRISYSLFTALRVWGVGNEAGVGPGLGEWAVVTGSTDGIGKSYAEELAKHGMKVVLIS
: :::...:::. : .:.: :...:: .
CCDS97 RFLRADGDLTLLWAEWQGRRPEWELTDMVVW--VTGASSGIGEELAYQLSKLGVSLVLSA
30 40 50 60 70 80
90 100 110 120 130
pF1KB5 RSKDKLDQVSSEIKEKFKVETRTIAV------DFASEDIYDKIKTGLAGLEIGILVNNVG
: .:..:. . :. ... . : : : .:.. : : .: ::::: :
CCDS97 RRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFG-RIDILVNNGG
90 100 110 120 130 140
140 150 160 170 180 190
pF1KB5 MSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLP
:: . .:. .:: : .:.:..: :.. ..:. ::: :.::..: :....: :..
CCDS97 MSQR--SLCMDT-SLD-VYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIIS
150 160 170 180 190
200 210 220 230 240 250
pF1KB5 VPLLTIYSATK-TFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPET
::: : :.: .. ::. : :..:... : : .....
CCDS97 VPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGN
200 210 220 230 240 250
260 270 280 290 300 310
pF1KB5 FVKSAIKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVMNMNKSTRAHYLKKTKKN
CCDS97 NGDQSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKMGKKR
260 270 280 290 300 310
>>CCDS9605.1 DHRS4 gene_id:10901|Hs108|chr14 (278 aa)
initn: 209 init1: 114 opt: 253 Z-score: 315.3 bits: 66.3 E(32554): 3.1e-11
Smith-Waterman score: 253; 28.0% identity (62.3% similar) in 239 aa overlap (35-264:12-243)
10 20 30 40 50
pF1KB5 LPAAGFLYWVGAGTVAYLALRISYSLFTALRVWGVGNEAGVG-----PGLGEWAVVTGST
:.:. :. : : .. :.::.::
CCDS96 MHKAGLLGLCARAWNSVRMASSGMTRRDPLANKVALVTAST
10 20 30 40
60 70 80 90 100 110
pF1KB5 DGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIK
:::: . :..::. : .::. ::.....::. . .. . : :. .:: .
CCDS96 DGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 TG--LAGLEIGILVNNVGMSYEYPEYFLDVPDL-DNVIKKMININILSVCKMTQLVLPGM
:. : : : :::.:.... : .: .. :. ..: : ..::. . ::. :.: :
CCDS96 TAVKLHG-GIDILVSNAAVN---P-FFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEM
110 120 130 140 150
180 190 200 210 220 230
pF1KB5 VERSKGAILNISSGSGMLPVPLLTIYSATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVA
.:. :... .:: ... : : .. :...:: . ... : : ... :. . : ..
CCDS96 EKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIK
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB5 TKLAKIRKPTLDKPSPETFVKSA-IKTVGLQSRTNGYLIHALMGSIISNLPSWIYLKIVM
:..... .:: . :.. .. :. .:
CCDS96 TSFSRML--WMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGT
220 230 240 250 260 270
312 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 18 17:33:35 2016 done: Fri Nov 18 17:33:36 2016
Total Scan time: 2.300 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]