Result of FASTA (ccds) for
pF1KB5235
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5235, 509 aa
1>>>pF1KB5235 509 - 509 aa - 509 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1882+/-0.00102; mu= 13.9973+/- 0.061
mean_var=77.7216+/-15.299, 0's: 0 Z-trim(104.3): 22 B-trim: 0 in 0/51
Lambda= 0.145480
statistics sampled from 7809 (7821) to 7809 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.602), E-opt: 0.2 (0.24), width: 16
Scan time: 3.210
The best scores are: opt bits E(32554)
CCDS4237.1 HARS gene_id:3035|Hs108|chr5 ( 509) 3303 703.1 1.9e-202
CCDS58976.1 HARS gene_id:3035|Hs108|chr5 ( 469) 2680 572.3 4e-163
CCDS4238.1 HARS2 gene_id:23438|Hs108|chr5 ( 506) 2466 527.4 1.4e-149
CCDS64267.1 HARS2 gene_id:23438|Hs108|chr5 ( 481) 2407 515.0 7.3e-146
CCDS58977.1 HARS gene_id:3035|Hs108|chr5 ( 449) 2187 468.8 5.5e-132
CCDS58978.1 HARS gene_id:3035|Hs108|chr5 ( 489) 2183 468.0 1.1e-131
CCDS75323.1 HARS gene_id:3035|Hs108|chr5 ( 395) 2181 467.6 1.2e-131
CCDS75324.1 HARS gene_id:3035|Hs108|chr5 ( 435) 2177 466.7 2.3e-131
CCDS42016.1 EIF2AK4 gene_id:440275|Hs108|chr15 (1649) 525 120.2 1.8e-26
>>CCDS4237.1 HARS gene_id:3035|Hs108|chr5 (509 aa)
initn: 3303 init1: 3303 opt: 3303 Z-score: 3748.1 bits: 703.1 E(32554): 1.9e-202
Smith-Waterman score: 3303; 100.0% identity (100.0% similar) in 509 aa overlap (1-509:1-509)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
430 440 450 460 470 480
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS42 VTSREEVDVRREDLVEEIKRRTGQPLCIC
490 500
>>CCDS58976.1 HARS gene_id:3035|Hs108|chr5 (469 aa)
initn: 2677 init1: 2677 opt: 2680 Z-score: 3042.0 bits: 572.3 E(32554): 4e-163
Smith-Waterman score: 2943; 92.1% identity (92.1% similar) in 509 aa overlap (1-509:1-469)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
::::::::::::::::::::
CCDS58 ----------------------------------------ETLMGKYGEDSKLIYDLKDQ
70 80
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
390 400 410 420 430 440
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS58 VTSREEVDVRREDLVEEIKRRTGQPLCIC
450 460
>>CCDS4238.1 HARS2 gene_id:23438|Hs108|chr5 (506 aa)
initn: 2489 init1: 2460 opt: 2466 Z-score: 2798.7 bits: 527.4 E(32554): 1.4e-149
Smith-Waterman score: 2466; 76.3% identity (93.9% similar) in 473 aa overlap (32-504:34-505)
10 20 30 40 50 60
pF1KB5 AERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPKG
. .::. . : .:: . : .:..:::::
CCDS42 LGLLPRRAWASLLSQLLRPPCASCTGAVRCQSQVAEAV-LTSQLKAHQEKPNFIIKTPKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQG
::: ::..:.::::..:..: :::::::. .:::.::::::: :::::: :.:::::::
CCDS42 TRDLSPQHMVVREKILDLVISCFKRHGAKGMDTPAFELKETLTEKYGEDSGLMYDLKDQG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGN
::::::::::::::::::::::. ..::::..::.::..:....:::::: ::::::::.
CCDS42 GELLSLRYDLTVPFARYLAMNKVKKMKRYHVGKVWRRESPTIVQGRYREFCQCDFDIAGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 FDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDKL
:::::::::::::::::::.::.::::.:::::::.:::::.::: .::::.::::.:::
CCDS42 FDPMIPDAECLKIMCEILSGLQLGDFLIKVNDRRIVDGMFAVCGVPESKFRAICSSIDKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLGD
::..:..:..::: .:::::::::::::::: :::::::::..:::.:::::::::::::
CCDS42 DKMAWKDVRHEMVVKKGLAPEVADRIGDYVQCHGGVSLVEQMFQDPRLSQNKQALEGLGD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGG
::::::::::::: :::::::::::::::::::::::::::::.:::::::.::::::::
CCDS42 LKLLFEYLTLFGIADKISFDLSLARGLDYYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLL
:::::::::::::.::::::::::::::: :::::... ::.:::::::.::. ::..:
CCDS42 RYDGLVGMFDPKGHKVPCVGLSIGVERIFYIVEQRMKTKGEKVRTTETQVFVATPQKNFL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSV
.:::::..::::.:::::.:::.:::::.::.::: .:::::.::::::::.::::.:::
CCDS42 QERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELKEGVIKIRSV
430 440 450 460 470 480
490 500
pF1KB5 TSREEVDVRREDLVEEIKRRTGQPLCIC
.::::: ..::..: ::..: ..
CCDS42 ASREEVAIKRENFVAEIQKRLSES
490 500
>>CCDS64267.1 HARS2 gene_id:23438|Hs108|chr5 (481 aa)
initn: 2434 init1: 2405 opt: 2407 Z-score: 2732.2 bits: 515.0 E(32554): 7.3e-146
Smith-Waterman score: 2407; 78.7% identity (95.5% similar) in 445 aa overlap (60-504:36-480)
30 40 50 60 70 80
pF1KB5 LIEEEVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGA
.:::: ::..:.::::..:..: :::::::
CCDS64 LLPRRAWASLLSQLLRPPCASCTGAVRCQSQGTRDLSPQHMVVREKILDLVISCFKRHGA
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB5 EVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKR
. .:::.::::::: :::::: :.:::::::::::::::::::::::::::::. ..::
CCDS64 KGMDTPAFELKETLTEKYGEDSGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKVKKMKR
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB5 YHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFLV
::..::.::..:....:::::: ::::::::.:::::::::::::::::::.::.::::.
CCDS64 YHVGKVWRRESPTIVQGRYREFCQCDFDIAGQFDPMIPDAECLKIMCEILSGLQLGDFLI
130 140 150 160 170 180
210 220 230 240 250 260
pF1KB5 KVNDRRILDGMFAICGVSDSKFRTICSSVDKLDKVSWEEVKNEMVGEKGLAPEVADRIGD
:::::::.:::::.::: .::::.::::.:::::..:..:..::: .:::::::::::::
CCDS64 KVNDRRIVDGMFAVCGVPESKFRAICSSIDKLDKMAWKDVRHEMVVKKGLAPEVADRIGD
190 200 210 220 230 240
270 280 290 300 310 320
pF1KB5 YVQQHGGVSLVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLD
::: :::::::::..:::.:::::::::::::::::::::::::: ::::::::::::::
CCDS64 YVQCHGGVSLVEQMFQDPRLSQNKQALEGLGDLKLLFEYLTLFGIADKISFDLSLARGLD
250 260 270 280 290 300
330 340 350 360 370 380
pF1KB5 YYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYDGLVGMFDPKGRKVPCVGLSIGVERI
:::::::::::::::.:::::::.:::::::::::::::::::::.::::::::::::::
CCDS64 YYTGVIYEAVLLQTPTQAGEEPLNVGSVAAGGRYDGLVGMFDPKGHKVPCVGLSIGVERI
310 320 330 340 350 360
390 400 410 420 430 440
pF1KB5 FSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAELLYKKNPKLL
: :::::... ::.:::::::.::. ::..:.:::::..::::.:::::.:::.:::::
CCDS64 FYIVEQRMKTKGEKVRTTETQVFVATPQKNFLQERLKLIAELWDSGIKAEMLYKNNPKLL
370 380 390 400 410 420
450 460 470 480 490 500
pF1KB5 NQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTGQPLCIC
.::.::: .:::::.::::::::.::::.:::.::::: ..::..: ::..: ..
CCDS64 TQLHYCESTGIPLVVIIGEQELKEGVIKIRSVASREEVAIKRENFVAEIQKRLSES
430 440 450 460 470 480
>>CCDS58977.1 HARS gene_id:3035|Hs108|chr5 (449 aa)
initn: 2526 init1: 2176 opt: 2187 Z-score: 2483.1 bits: 468.8 E(32554): 5.5e-132
Smith-Waterman score: 2745; 88.2% identity (88.2% similar) in 509 aa overlap (1-509:1-449)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
::::::::::::::::::::
CCDS58 ----------------------------------------ETLMGKYGEDSKLIYDLKDQ
70 80
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
:::::::::::::::::::::::::::::::::: ::::::
CCDS58 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAK--------------------DFDIAG
90 100 110 120
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
250 260 270 280 290 300
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
370 380 390 400 410 420
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS58 VTSREEVDVRREDLVEEIKRRTGQPLCIC
430 440
>>CCDS58978.1 HARS gene_id:3035|Hs108|chr5 (489 aa)
initn: 3141 init1: 2176 opt: 2183 Z-score: 2478.0 bits: 468.0 E(32554): 1.1e-131
Smith-Waterman score: 3105; 96.1% identity (96.1% similar) in 509 aa overlap (1-509:1-489)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
:::::::::::::::::::::::::::::::::: ::::::
CCDS58 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAK--------------------DFDIAG
130 140 150 160
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
410 420 430 440 450 460
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS58 VTSREEVDVRREDLVEEIKRRTGQPLCIC
470 480
>>CCDS75323.1 HARS gene_id:3035|Hs108|chr5 (395 aa)
initn: 2524 init1: 2176 opt: 2181 Z-score: 2477.2 bits: 467.6 E(32554): 1.2e-131
Smith-Waterman score: 2300; 77.6% identity (77.6% similar) in 509 aa overlap (1-509:1-395)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
CCDS75 ------------------------------------------------------------
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
::::::
CCDS75 ------------------------------------------------------DFDIAG
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
70 80 90 100 110 120
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
130 140 150 160 170 180
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
190 200 210 220 230 240
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
250 260 270 280 290 300
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
310 320 330 340 350 360
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS75 VTSREEVDVRREDLVEEIKRRTGQPLCIC
370 380 390
>>CCDS75324.1 HARS gene_id:3035|Hs108|chr5 (435 aa)
initn: 2176 init1: 2176 opt: 2177 Z-score: 2472.0 bits: 466.7 E(32554): 2.3e-131
Smith-Waterman score: 2650; 85.5% identity (85.5% similar) in 509 aa overlap (1-509:1-435)
10 20 30 40 50 60
pF1KB5 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MAERAALEELVKLQGERVRGLKQQKASAELIEEEVAKLLKLKAQLGPDESKQKFVLKTPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQ
::::::::::::::::::::::::::::::::::::::::
CCDS75 GTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELK--------------------
70 80 90 100
130 140 150 160 170 180
pF1KB5 GGELLSLRYDLTVPFARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
::::::
CCDS75 ------------------------------------------------------DFDIAG
190 200 210 220 230 240
pF1KB5 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NFDPMIPDAECLKIMCEILSSLQIGDFLVKVNDRRILDGMFAICGVSDSKFRTICSSVDK
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB5 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLLQDPKLSQNKQALEGLG
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB5 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAG
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB5 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKL
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB5 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LEERLKLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRS
350 360 370 380 390 400
490 500
pF1KB5 VTSREEVDVRREDLVEEIKRRTGQPLCIC
:::::::::::::::::::::::::::::
CCDS75 VTSREEVDVRREDLVEEIKRRTGQPLCIC
410 420 430
>>CCDS42016.1 EIF2AK4 gene_id:440275|Hs108|chr15 (1649 aa)
initn: 363 init1: 139 opt: 525 Z-score: 588.8 bits: 120.2 E(32554): 1.8e-26
Smith-Waterman score: 525; 26.4% identity (63.4% similar) in 454 aa overlap (64-501:1055-1489)
40 50 60 70 80 90
pF1KB5 EVAKLLKLKAQLGPDESKQKFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVID
..: : ....: ..::: :::::: .
CCDS42 KAYRTMMAQIFSQRISPAIDYTYDSDILKGNFSIRTAKMQQHVCETIIRIFKRHGAVQLC
1030 1040 1050 1060 1070 1080
100 110 120 130 140 150
pF1KB5 TPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLTNIKRYHIA
::.. .. . ...: . .. :..: :. : .:: .:::::.: :.. :.::: :
CCDS42 TPLLLPRNRQIYEHNEAALFM----DHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIE
1090 1100 1110 1120 1130 1140
160 170 180 190 200
pF1KB5 KVYRRDNPAMTRGRYREFYQCDFDIA-GNFDPMIPDAECLKIMCEILS---SLQIGDFLV
.:.: . . : . .:. .: :::. .. . ..: :: . . ::.. .:: .. .
CCDS42 RVFRPRK--LDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSI
1150 1160 1170 1180 1190
210 220 230 240 250 260
pF1KB5 KVNDRRILDGMFAICGVSDSKFRTICSSV-DKL-DKVSWEEVKNEMVGEKGLAPEVADRI
.: .: ... ::. ..:. . . : . .:.. .::. .. . . :. . :.
CCDS42 YLNHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLS-LSSNSLCRL
1200 1210 1220 1230 1240 1250
270 280 290 300 310 320
pF1KB5 GDYVQQHGGVS----LVEQLLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLS
...:.: .. ...:... : . . . :: ::. . : .:: .. ..:.
CCDS42 YKFIEQKGDLQDLMPTINSLIKQ-KTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLG
1260 1270 1280 1290 1300 1310
330 340 350 360 370
pF1KB5 LARGLDYYTGVIYEAV-LLQTPAQAGEEPLGVGSVAAGGRYDGLVGMF-DPKGR-KVPC-
:. .. ..:.:.. : ... .: : : ::::::: :. .: :.. ::
CCDS42 LVYKVQQHNGIIFQFVAFIKRRQRAVPEIL-----AAGGRYDLLIPQFRGPQALGPVPTA
1320 1330 1340 1350 1360 1370
380 390 400 410 420 430
pF1KB5 VGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQKKLLEERLKLVSELWDAGIKAE
.:.::....: . : . .::.. . ..::.:. . . . ..:...:: ::: ::
CCDS42 IGVSIAIDKISAAVLN----MEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAE
1380 1390 1400 1410 1420
440 450 460 470 480 490
pF1KB5 LLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVR--REDLVEE
..: . . . .::.. : ::.....: . .:..: ...... : . .::..
CCDS42 IMYDWSQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFEKERQTEKRVLETELVDH
1430 1440 1450 1460 1470 1480
500
pF1KB5 IKRRTGQPLCIC
. ..
CCDS42 VLQKLRTKVTDERNGREASDNLAVQNLKGSFSNASGLFEIHGATVVPIVSVLAPEKLSAS
1490 1500 1510 1520 1530 1540
509 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:15:20 2016 done: Fri Nov 4 22:15:21 2016
Total Scan time: 3.210 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]