Result of FASTA (omim) for
pF1KB5105
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5105, 617 aa
1>>>pF1KB5105 617 - 617 aa - 617 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4513+/-0.000436; mu= 18.7129+/- 0.027
mean_var=75.9047+/-15.730, 0's: 0 Z-trim(110.8): 17 B-trim: 729 in 1/49
Lambda= 0.147211
statistics sampled from 19249 (19262) to 19249 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.226), width: 16
Scan time: 10.380
The best scores are: opt bits E(85289)
NP_001681 (OMIM: 607027) V-type proton ATPase cata ( 617) 4060 872.4 0
NP_001677 (OMIM: 102910) ATP synthase subunit beta ( 529) 337 81.6 7.4e-15
NP_001684 (OMIM: 124480,606939,616455) V-type prot ( 511) 305 74.8 8e-13
NP_001683 (OMIM: 192132,267300) V-type proton ATPa ( 513) 289 71.4 8.5e-12
XP_011531209 (OMIM: 192132,267300) PREDICTED: V-ty ( 553) 289 71.5 9e-12
NP_001244264 (OMIM: 164360,615228,616045) ATP synt ( 503) 236 60.2 2e-08
NP_001001935 (OMIM: 164360,615228,616045) ATP synt ( 503) 236 60.2 2e-08
NP_001244263 (OMIM: 164360,615228,616045) ATP synt ( 531) 236 60.2 2.1e-08
NP_004037 (OMIM: 164360,615228,616045) ATP synthas ( 553) 236 60.2 2.2e-08
NP_001001937 (OMIM: 164360,615228,616045) ATP synt ( 553) 236 60.2 2.2e-08
XP_016881278 (OMIM: 164360,615228,616045) PREDICTE ( 586) 236 60.2 2.3e-08
>>NP_001681 (OMIM: 607027) V-type proton ATPase catalyti (617 aa)
initn: 4060 init1: 4060 opt: 4060 Z-score: 4660.0 bits: 872.4 E(85289): 0
Smith-Waterman score: 4060; 100.0% identity (100.0% similar) in 617 aa overlap (1-617:1-617)
10 20 30 40 50 60
pF1KB5 MDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 MATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 VTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 EILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 LSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSD
550 560 570 580 590 600
610
pF1KB5 YAQLLEDMQNAFRSLED
:::::::::::::::::
NP_001 YAQLLEDMQNAFRSLED
610
>>NP_001677 (OMIM: 102910) ATP synthase subunit beta, mi (529 aa)
initn: 147 init1: 147 opt: 337 Z-score: 387.7 bits: 81.6 E(85289): 7.4e-15
Smith-Waterman score: 395; 26.4% identity (59.4% similar) in 394 aa overlap (141-522:97-466)
120 130 140 150 160
pF1KB5 SQTQSIYIPRGVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENS--LIKHKIML
:.:..:. . . :. ... :.. . .:
NP_001 IGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVL
70 80 90 100 110 120
170 180 190 200 210 220
pF1KB5 PPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEK--FTMVQVWPVRQVRPVTEKLPANHP
. :. : : . .: .... : . :. . : :.. : .. ...
NP_001 ---DSGAPIKI--PVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQE
130 140 150 160 170 180
230 240 250 260 270 280
pF1KB5 LL-TGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKY---SNSDVIIYVGCGERGN
.: :: .:.: : : ..:: .. :. : ::::. . : . ... ...: :::
NP_001 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
190 200 210 220 230 240
290 300 310 320 330 340
pF1KB5 EMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDM-G
: ... ... : . .. : . ...::: . : : .:: ::.:..:::::. :
NP_001 EGNDLYHEMIE-SGVINLK--DATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG
250 260 270 280 290
350 360 370 380 390 400
pF1KB5 YHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPERE
: .. :. :...: :.:. :...:. :: :.. .... :: .: .
NP_001 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------K
300 310 320 330 340 350
410 420 430 440 450
pF1KB5 GSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMR--
::.. : :. :. :..::. ..:.. ... :.. .:. .:.:. : : :. :
NP_001 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN
360 370 380 390 400 410
460 470 480 490 500 510
pF1KB5 -ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDD
. .:.:: . ...:::. ..: .:. ..: :.: ::.:. :. :.
NP_001 IVGSEHYD--------VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQR-
420 430 440 450 460
520 530 540 550 560 570
pF1KB5 FLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDIL
::.:
NP_001 FLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADK
470 480 490 500 510 520
>>NP_001684 (OMIM: 124480,606939,616455) V-type proton A (511 aa)
initn: 206 init1: 155 opt: 305 Z-score: 351.2 bits: 74.8 E(85289): 8e-13
Smith-Waterman score: 306; 24.3% identity (55.6% similar) in 374 aa overlap (201-558:148-499)
180 190 200 210 220
pF1KB5 RNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVR-QVRPVTEKLPANHPLLT
: : .. :. : : :.. . :
NP_001 ILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEM-----IQT
120 130 140 150 160 170
230 240 250 260 270
pF1KB5 GQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYS-----NSDVIIY------VGCG
: ..:.. ..: : .: : .. :. .. . . ..::. : . .
NP_001 GISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFA
180 190 200 210 220 230
280 290 300 310 320 330
pF1KB5 ERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYF-
: .: :. : : . .: .:..... : : .: :. : . ..: .:..
NP_001 AMGVNM-ETAR-FFKSDFEENGSMDNV----CLFLNLANDPTIERIITPRLALTTAEFLA
240 250 260 270 280
340 350 360 370 380 390
pF1KB5 RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGN
. :: .. . : .::::::.:. :.:. :.:.:. . ::..:::::::. :
NP_001 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE--G-
290 300 310 320 330 340
400 410 420 430 440 450
pF1KB5 PEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKY
:.::.. . .. :. :.. :. . : :.. .:..: .:. .: .: : : :.
NP_001 --RNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRL
350 360 370 380 390 400
460 470 480 490 500 510
pF1KB5 MR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIK
:. :. : . .. . . . .. .:. . .::. .:. : . :: . ..
NP_001 MKSAIGEGMTRK--DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFE
410 420 430 440 450
520 530 540 550 560 570
pF1KB5 DDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFY--DMARRAVETTAQSDNKITWSIIREHM
.:. :. ::. : .:. . ... .. .: .: ..:
NP_001 RNFIAQG---PYENRTVF-ETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
460 470 480 490 500 510
580 590 600 610
pF1KB5 GDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAFRSLED
>>NP_001683 (OMIM: 192132,267300) V-type proton ATPase s (513 aa)
initn: 155 init1: 155 opt: 289 Z-score: 332.8 bits: 71.4 E(85289): 8.5e-12
Smith-Waterman score: 289; 27.3% identity (58.8% similar) in 238 aa overlap (299-531:241-468)
270 280 290 300 310 320
pF1KB5 SDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIY
: . .. : . : : .: :. : .
NP_001 KAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPR
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 TGITLSEYF-RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYE
..: .:.. . :: .. . : .::::::.:. :.:. :.:.:. . ::..::
NP_001 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 RAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV---QVFWGLDKKLAQRKH
:::::. : : ::.. . .. :. :.. :. . : :.. :.. .:..: .:.
NP_001 RAGRVE--G---RGGSITQIPILTMPNDDITHPIPDLT-GFITEGQIY--VDRQLHNRQI
340 350 360 370 380
450 460 470 480 490 500
pF1KB5 FPSVNWLISYSKYMR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAE
.: .: : : :. :. :. : . .. . . .. .:. . .::. .:.
NP_001 YPPINVLPSLSRLMKSAIGEGMTRK--DHGDVSNQLYACYAIGKDVQAMKAVVGEEALTS
390 400 410 420 430 440
510 520 530 540 550 560
pF1KB5 TDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDN
: . :: . .. .:..:. : . :
NP_001 EDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSR
450 460 470 480 490 500
>>XP_011531209 (OMIM: 192132,267300) PREDICTED: V-type p (553 aa)
initn: 155 init1: 155 opt: 289 Z-score: 332.3 bits: 71.5 E(85289): 9e-12
Smith-Waterman score: 289; 27.3% identity (58.8% similar) in 238 aa overlap (299-531:281-508)
270 280 290 300 310 320
pF1KB5 SDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIY
: . .. : . : : .: :. : .
XP_011 KAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPR
260 270 280 290 300 310
330 340 350 360 370 380
pF1KB5 TGITLSEYF-RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYE
..: .:.. . :: .. . : .::::::.:. :.:. :.:.:. . ::..::
XP_011 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
320 330 340 350 360 370
390 400 410 420 430 440
pF1KB5 RAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV---QVFWGLDKKLAQRKH
:::::. : : ::.. . .. :. :.. :. . : :.. :.. .:..: .:.
XP_011 RAGRVE--G---RGGSITQIPILTMPNDDITHPIPDLT-GFITEGQIY--VDRQLHNRQI
380 390 400 410 420
450 460 470 480 490 500
pF1KB5 FPSVNWLISYSKYMR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAE
.: .: : : :. :. :. : . .. . . .. .:. . .::. .:.
XP_011 YPPINVLPSLSRLMKSAIGEGMTRK--DHGDVSNQLYACYAIGKDVQAMKAVVGEEALTS
430 440 450 460 470 480
510 520 530 540 550 560
pF1KB5 TDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDN
: . :: . .. .:..:. : . :
XP_011 EDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSR
490 500 510 520 530 540
>>NP_001244264 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 179 init1: 112 opt: 236 Z-score: 272.1 bits: 60.2 E(85289): 2e-08
Smith-Waterman score: 257; 25.5% identity (56.7% similar) in 326 aa overlap (217-527:129-428)
190 200 210 220 230 240
pF1KB5 TSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTT
. .. . .:. :: ...:.: : .:
NP_001 RVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRE
100 110 120 130 140 150
250 260 270 280 290
pF1KB5 AIPGAFGCGKTVISQSL----SKYSN-SD-----VIIYVGCGERGNEMSEVLRDFPELTM
: : ::: :. . ..... :: :::. :.. . ...... .::
NP_001 LIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVK---RLT-
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAE
..:. :: : .:. :.. . . . :.: ...::::: : :. .. :. :. :
NP_001 DADA-----MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV
220 230 240 250 260
360 370 380 390 400 410
pF1KB5 ALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPP
: :..: : . :. .::. :: .:: :::.. ... ::.. . ..
NP_001 AYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK---MNDAFGGGSLTALPVIETQ
270 280 290 300 310 320
420 430 440 450 460 470
pF1KB5 GGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTE
.:: : . . ...:. :.: :. .: . :..: .: :. : . :. .
NP_001 AGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAG
330 340 350 360 370 380
480 490 500 510 520 530
pF1KB5 FVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF
. : :. : .: .: ..:. :. : :... . ..: ..:.:. :.:
NP_001 TMKL-----ELAQYRE-VAAFAQF-GSDLDAATQQLLSRGVRLT--ELLKQGQYSPMAIE
390 400 410 420 430
540 550 560 570 580 590
pF1KB5 CPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLK
NP_001 EQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKE
440 450 460 470 480 490
>>NP_001001935 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 179 init1: 112 opt: 236 Z-score: 272.1 bits: 60.2 E(85289): 2e-08
Smith-Waterman score: 257; 25.5% identity (56.7% similar) in 326 aa overlap (217-527:129-428)
190 200 210 220 230 240
pF1KB5 TSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTT
. .. . .:. :: ...:.: : .:
NP_001 RVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRE
100 110 120 130 140 150
250 260 270 280 290
pF1KB5 AIPGAFGCGKTVISQSL----SKYSN-SD-----VIIYVGCGERGNEMSEVLRDFPELTM
: : ::: :. . ..... :: :::. :.. . ...... .::
NP_001 LIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVK---RLT-
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAE
..:. :: : .:. :.. . . . :.: ...::::: : :. .. :. :. :
NP_001 DADA-----MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV
220 230 240 250 260
360 370 380 390 400 410
pF1KB5 ALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPP
: :..: : . :. .::. :: .:: :::.. ... ::.. . ..
NP_001 AYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK---MNDAFGGGSLTALPVIETQ
270 280 290 300 310 320
420 430 440 450 460 470
pF1KB5 GGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTE
.:: : . . ...:. :.: :. .: . :..: .: :. : . :. .
NP_001 AGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAG
330 340 350 360 370 380
480 490 500 510 520 530
pF1KB5 FVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF
. : :. : .: .: ..:. :. : :... . ..: ..:.:. :.:
NP_001 TMKL-----ELAQYRE-VAAFAQF-GSDLDAATQQLLSRGVRLT--ELLKQGQYSPMAIE
390 400 410 420 430
540 550 560 570 580 590
pF1KB5 CPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLK
NP_001 EQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKE
440 450 460 470 480 490
>>NP_001244263 (OMIM: 164360,615228,616045) ATP synthase (531 aa)
initn: 152 init1: 112 opt: 236 Z-score: 271.7 bits: 60.2 E(85289): 2.1e-08
Smith-Waterman score: 257; 25.5% identity (56.7% similar) in 326 aa overlap (217-527:157-456)
190 200 210 220 230 240
pF1KB5 TSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTT
. .. . .:. :: ...:.: : .:
NP_001 EGDIVKRTGAIVDGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRE
130 140 150 160 170 180
250 260 270 280 290
pF1KB5 AIPGAFGCGKTVISQSL----SKYSN-SD-----VIIYVGCGERGNEMSEVLRDFPELTM
: : ::: :. . ..... :: :::. :.. . ...... .::
NP_001 LIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVK---RLT-
190 200 210 220 230 240
300 310 320 330 340 350
pF1KB5 EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAE
..:. :: : .:. :.. . . . :.: ...::::: : :. .. :. :. :
NP_001 DADA-----MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV
250 260 270 280 290
360 370 380 390 400 410
pF1KB5 ALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPP
: :..: : . :. .::. :: .:: :::.. ... ::.. . ..
NP_001 AYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK---MNDAFGGGSLTALPVIETQ
300 310 320 330 340 350
420 430 440 450 460 470
pF1KB5 GGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTE
.:: : . . ...:. :.: :. .: . :..: .: :. : . :. .
NP_001 AGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAG
360 370 380 390 400
480 490 500 510 520 530
pF1KB5 FVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF
. : :. : .: .: ..:. :. : :... . ..: ..:.:. :.:
NP_001 TMKL-----ELAQYRE-VAAFAQF-GSDLDAATQQLLSRGVRLT--ELLKQGQYSPMAIE
410 420 430 440 450 460
540 550 560 570 580 590
pF1KB5 CPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLK
NP_001 EQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKE
470 480 490 500 510 520
>>NP_004037 (OMIM: 164360,615228,616045) ATP synthase su (553 aa)
initn: 179 init1: 112 opt: 236 Z-score: 271.5 bits: 60.2 E(85289): 2.2e-08
Smith-Waterman score: 257; 25.5% identity (56.7% similar) in 326 aa overlap (217-527:179-478)
190 200 210 220 230 240
pF1KB5 TSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTT
. .. . .:. :: ...:.: : .:
NP_004 RVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRE
150 160 170 180 190 200
250 260 270 280 290
pF1KB5 AIPGAFGCGKTVISQSL----SKYSN-SD-----VIIYVGCGERGNEMSEVLRDFPELTM
: : ::: :. . ..... :: :::. :.. . ...... .::
NP_004 LIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVK---RLT-
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB5 EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAE
..:. :: : .:. :.. . . . :.: ...::::: : :. .. :. :. :
NP_004 DADA-----MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV
270 280 290 300 310
360 370 380 390 400 410
pF1KB5 ALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPP
: :..: : . :. .::. :: .:: :::.. ... ::.. . ..
NP_004 AYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK---MNDAFGGGSLTALPVIETQ
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB5 GGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTE
.:: : . . ...:. :.: :. .: . :..: .: :. : . :. .
NP_004 AGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAG
380 390 400 410 420 430
480 490 500 510 520 530
pF1KB5 FVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF
. : :. : .: .: ..:. :. : :... . ..: ..:.:. :.:
NP_004 TMKL-----ELAQYRE-VAAFAQF-GSDLDAATQQLLSRGVRLT--ELLKQGQYSPMAIE
440 450 460 470 480
540 550 560 570 580 590
pF1KB5 CPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLK
NP_004 EQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKE
490 500 510 520 530 540
>>NP_001001937 (OMIM: 164360,615228,616045) ATP synthase (553 aa)
initn: 179 init1: 112 opt: 236 Z-score: 271.5 bits: 60.2 E(85289): 2.2e-08
Smith-Waterman score: 257; 25.5% identity (56.7% similar) in 326 aa overlap (217-527:179-478)
190 200 210 220 230 240
pF1KB5 TSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTT
. .. . .:. :: ...:.: : .:
NP_001 RVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRE
150 160 170 180 190 200
250 260 270 280 290
pF1KB5 AIPGAFGCGKTVISQSL----SKYSN-SD-----VIIYVGCGERGNEMSEVLRDFPELTM
: : ::: :. . ..... :: :::. :.. . ...... .::
NP_001 LIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVK---RLT-
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB5 EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAE
..:. :: : .:. :.. . . . :.: ...::::: : :. .. :. :. :
NP_001 DADA-----MKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV
270 280 290 300 310
360 370 380 390 400 410
pF1KB5 ALREISGRLAEMPADSGYPA---YLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPP
: :..: : . :. .::. :: .:: :::.. ... ::.. . ..
NP_001 AYRQMSLLLRRPPGREAYPGDVFYLHSRL---LERAAK---MNDAFGGGSLTALPVIETQ
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB5 GGDFSDPVTSATLGIV--QVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTE
.:: : . . ...:. :.: :. .: . :..: .: :. : . :. .
NP_001 AGDVSAYIPTNVISITDGQIF--LETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAG
380 390 400 410 420 430
480 490 500 510 520 530
pF1KB5 FVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRF
. : :. : .: .: ..:. :. : :... . ..: ..:.:. :.:
NP_001 TMKL-----ELAQYRE-VAAFAQF-GSDLDAATQQLLSRGVRLT--ELLKQGQYSPMAIE
440 450 460 470 480
540 550 560 570 580 590
pF1KB5 CPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLK
NP_001 EQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKE
490 500 510 520 530 540
617 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:15:42 2016 done: Sat Nov 5 07:15:44 2016
Total Scan time: 10.380 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]