Result of FASTA (ccds) for
pF1KB5105
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5105, 617 aa
1>>>pF1KB5105 617 - 617 aa - 617 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8016+/- 0.001; mu= 16.4593+/- 0.060
mean_var=69.0589+/-13.673, 0's: 0 Z-trim(104.1): 18 B-trim: 0 in 0/49
Lambda= 0.154335
statistics sampled from 7730 (7738) to 7730 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.609), E-opt: 0.2 (0.238), width: 16
Scan time: 3.470
The best scores are: opt bits E(32554)
CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 ( 617) 4060 913.5 0
CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 ( 529) 337 84.5 3.9e-16
CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 ( 511) 305 77.4 5.3e-14
CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 ( 513) 289 73.8 6.3e-13
>>CCDS2976.1 ATP6V1A gene_id:523|Hs108|chr3 (617 aa)
initn: 4060 init1: 4060 opt: 4060 Z-score: 4882.1 bits: 913.5 E(32554): 0
Smith-Waterman score: 4060; 100.0% identity (100.0% similar) in 617 aa overlap (1-617:1-617)
10 20 30 40 50 60
pF1KB5 MDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MDFSKLPKILDEDKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 MATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 GVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENSLIKHKIMLPPRNRGTVTYIA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PPGNYDTSDVVLELEFEGVKEKFTMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 VQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 KVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 VTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 VTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 EILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 EILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 LSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDILYKLSSMKFKDPLKDGEAKIKSD
550 560 570 580 590 600
610
pF1KB5 YAQLLEDMQNAFRSLED
:::::::::::::::::
CCDS29 YAQLLEDMQNAFRSLED
610
>>CCDS8924.1 ATP5B gene_id:506|Hs108|chr12 (529 aa)
initn: 147 init1: 147 opt: 337 Z-score: 403.1 bits: 84.5 E(32554): 3.9e-16
Smith-Waterman score: 395; 26.4% identity (59.4% similar) in 394 aa overlap (141-522:97-466)
120 130 140 150 160
pF1KB5 SQTQSIYIPRGVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVSENS--LIKHKIML
:.:..:. . . :. ... :.. . .:
CCDS89 IGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVL
70 80 90 100 110 120
170 180 190 200 210 220
pF1KB5 PPRNRGTVTYIAPPGNYDTSDVVLELEFEGVKEK--FTMVQVWPVRQVRPVTEKLPANHP
. :. : : . .: .... : . :. . : :.. : .. ...
CCDS89 ---DSGAPIKI--PVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQE
130 140 150 160 170 180
230 240 250 260 270 280
pF1KB5 LL-TGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKY---SNSDVIIYVGCGERGN
.: :: .:.: : : ..:: .. :. : ::::. . : . ... ...: :::
CCDS89 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
190 200 210 220 230 240
290 300 310 320 330 340
pF1KB5 EMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDM-G
: ... ... : . .. : . ...::: . : : .:: ::.:..:::::. :
CCDS89 EGNDLYHEMIE-SGVINLK--DATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG
250 260 270 280 290
350 360 370 380 390 400
pF1KB5 YHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPERE
: .. :. :...: :.:. :...:. :: :.. .... :: .: .
CCDS89 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------K
300 310 320 330 340 350
410 420 430 440 450
pF1KB5 GSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMR--
::.. : :. :. :..::. ..:.. ... :.. .:. .:.:. : : :. :
CCDS89 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPN
360 370 380 390 400 410
460 470 480 490 500 510
pF1KB5 -ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDD
. .:.:: . ...:::. ..: .:. ..: :.: ::.:. :. :.
CCDS89 IVGSEHYD--------VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQR-
420 430 440 450 460
520 530 540 550 560 570
pF1KB5 FLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGDIL
::.:
CCDS89 FLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADK
470 480 490 500 510 520
>>CCDS6014.1 ATP6V1B2 gene_id:526|Hs108|chr8 (511 aa)
initn: 206 init1: 155 opt: 305 Z-score: 364.9 bits: 77.4 E(32554): 5.3e-14
Smith-Waterman score: 306; 24.3% identity (55.6% similar) in 374 aa overlap (201-558:148-499)
180 190 200 210 220
pF1KB5 RNRGTVTYIAPPGNYDTSDVVLELEFEGVKEKFTMVQVWPVR-QVRPVTEKLPANHPLLT
: : .. :. : : :.. . :
CCDS60 ILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEM-----IQT
120 130 140 150 160 170
230 240 250 260 270
pF1KB5 GQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYS-----NSDVIIY------VGCG
: ..:.. ..: : .: : .. :. .. . . ..::. : . .
CCDS60 GISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFA
180 190 200 210 220 230
280 290 300 310 320 330
pF1KB5 ERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYF-
: .: :. : : . .: .:..... : : .: :. : . ..: .:..
CCDS60 AMGVNM-ETAR-FFKSDFEENGSMDNV----CLFLNLANDPTIERIITPRLALTTAEFLA
240 250 260 270 280
340 350 360 370 380 390
pF1KB5 RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGN
. :: .. . : .::::::.:. :.:. :.:.:. . ::..:::::::. :
CCDS60 YQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE--G-
290 300 310 320 330 340
400 410 420 430 440 450
pF1KB5 PEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKY
:.::.. . .. :. :.. :. . : :.. .:..: .:. .: .: : : :.
CCDS60 --RNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRL
350 360 370 380 390 400
460 470 480 490 500 510
pF1KB5 MR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIK
:. :. : . .. . . . .. .:. . .::. .:. : . :: . ..
CCDS60 MKSAIGEGMTRK--DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFE
410 420 430 440 450
520 530 540 550 560 570
pF1KB5 DDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFY--DMARRAVETTAQSDNKITWSIIREHM
.:. :. ::. : .:. . ... .. .: .: ..:
CCDS60 RNFIAQG---PYENRTVF-ETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
460 470 480 490 500 510
580 590 600 610
pF1KB5 GDILYKLSSMKFKDPLKDGEAKIKSDYAQLLEDMQNAFRSLED
>>CCDS1912.1 ATP6V1B1 gene_id:525|Hs108|chr2 (513 aa)
initn: 155 init1: 155 opt: 289 Z-score: 345.6 bits: 73.8 E(32554): 6.3e-13
Smith-Waterman score: 289; 27.3% identity (58.8% similar) in 238 aa overlap (299-531:241-468)
270 280 290 300 310 320
pF1KB5 SDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIY
: . .. : . : : .: :. : .
CCDS19 KAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPR
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 TGITLSEYF-RDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYE
..: .:.. . :: .. . : .::::::.:. :.:. :.:.:. . ::..::
CCDS19 LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 RAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIV---QVFWGLDKKLAQRKH
:::::. : : ::.. . .. :. :.. :. . : :.. :.. .:..: .:.
CCDS19 RAGRVE--G---RGGSITQIPILTMPNDDITHPIPDLT-GFITEGQIY--VDRQLHNRQI
340 350 360 370 380
450 460 470 480 490 500
pF1KB5 FPSVNWLISYSKYMR-ALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAE
.: .: : : :. :. :. : . .. . . .. .:. . .::. .:.
CCDS19 YPPINVLPSLSRLMKSAIGEGMTRK--DHGDVSNQLYACYAIGKDVQAMKAVVGEEALTS
390 400 410 420 430 440
510 520 530 540 550 560
pF1KB5 TDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDN
: . :: . .. .:..:. : . :
CCDS19 EDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSR
450 460 470 480 490 500
617 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:15:42 2016 done: Sat Nov 5 07:15:42 2016
Total Scan time: 3.470 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]