Result of FASTA (omim) for
pF1KB5059
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5059, 622 aa
1>>>pF1KB5059 622 - 622 aa - 622 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1567+/-0.000363; mu= 10.1239+/- 0.023
mean_var=115.1969+/-22.798, 0's: 0 Z-trim(116.3): 152 B-trim: 1101 in 2/55
Lambda= 0.119496
statistics sampled from 27116 (27287) to 27116 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.32), width: 16
Scan time: 11.940
The best scores are: opt bits E(85289)
NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 4111 720.1 5.7e-207
NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 3296 579.5 9.2e-165
NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 3296 579.5 9.2e-165
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 932 172.1 6.2e-42
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 930 171.7 7.9e-42
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 881 163.2 2.2e-39
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 877 162.5 3.4e-39
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 877 162.5 3.4e-39
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 877 162.5 3.8e-39
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 877 162.6 4e-39
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 872 161.6 5.2e-39
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 874 162.0 5.9e-39
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 874 162.1 6e-39
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 874 162.1 6.1e-39
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 874 162.1 6.1e-39
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 874 162.1 6.3e-39
XP_016884803 (OMIM: 300160,300958) PREDICTED: ATP- ( 475) 854 158.5 4.8e-38
NP_001180345 (OMIM: 300160,300958) ATP-dependent R ( 661) 854 158.6 6.4e-38
XP_016884802 (OMIM: 300160,300958) PREDICTED: ATP- ( 476) 851 158.0 6.9e-38
NP_001180346 (OMIM: 300160,300958) ATP-dependent R ( 646) 851 158.1 8.9e-38
NP_001289481 (OMIM: 400010,415000) ATP-dependent R ( 657) 851 158.1 9e-38
NP_001116137 (OMIM: 400010,415000) ATP-dependent R ( 660) 851 158.1 9.1e-38
NP_004651 (OMIM: 400010,415000) ATP-dependent RNA ( 660) 851 158.1 9.1e-38
NP_001347 (OMIM: 300160,300958) ATP-dependent RNA ( 662) 851 158.1 9.1e-38
XP_011542194 (OMIM: 300160,300958) PREDICTED: ATP- ( 598) 838 155.8 3.9e-37
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 749 140.5 2.1e-32
NP_001311124 (OMIM: 400010,415000) ATP-dependent R ( 637) 744 139.6 3.1e-32
NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 737 138.5 1e-31
XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 737 138.5 1e-31
NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 737 138.5 1e-31
XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 737 138.5 1e-31
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 724 136.2 3.3e-31
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 724 136.2 3.3e-31
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 724 136.2 3.3e-31
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 724 136.2 3.3e-31
XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 724 136.2 3.6e-31
XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 724 136.2 4.1e-31
XP_011522534 (OMIM: 612500) PREDICTED: probable AT ( 581) 719 135.3 5.8e-31
NP_008941 (OMIM: 612500) probable ATP-dependent RN ( 599) 719 135.3 5.9e-31
NP_001278405 (OMIM: 612500) probable ATP-dependent ( 491) 690 130.3 1.6e-29
NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 632 120.4 2.7e-26
NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 629 119.8 3.1e-26
NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 600 114.8 9.1e-25
XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 600 114.8 9.1e-25
XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 600 114.8 9.1e-25
XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 600 114.8 9.1e-25
NP_001958 (OMIM: 601102) eukaryotic initiation fac ( 407) 566 108.8 3.7e-23
NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411) 560 107.8 7.7e-23
NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 556 107.1 1.2e-22
NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 549 105.9 3.1e-22
>>NP_057306 (OMIM: 608170,616871) probable ATP-dependent (622 aa)
initn: 4111 init1: 4111 opt: 4111 Z-score: 3836.8 bits: 720.1 E(85289): 5.7e-207
Smith-Waterman score: 4111; 100.0% identity (100.0% similar) in 622 aa overlap (1-622:1-622)
10 20 30 40 50 60
pF1KB5 MEESEPERKRARTDEVPAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MEESEPERKRARTDEVPAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
550 560 570 580 590 600
610 620
pF1KB5 MQTKQVSNIGRKDYLAHSSMDF
::::::::::::::::::::::
NP_057 MQTKQVSNIGRKDYLAHSSMDF
610 620
>>NP_001308759 (OMIM: 608170,616871) probable ATP-depend (496 aa)
initn: 3296 init1: 3296 opt: 3296 Z-score: 3079.0 bits: 579.5 E(85289): 9.2e-165
Smith-Waterman score: 3296; 100.0% identity (100.0% similar) in 496 aa overlap (127-622:1-496)
100 110 120 130 140 150
pF1KB5 KAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMS
::::::::::::::::::::::::::::::
NP_001 MSVKEMAKGITYDDPIKTSWTPPRYVLSMS
10 20 30
160 170 180 190 200 210
pF1KB5 EERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTIL
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 LEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 ICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTI
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB5 NVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKG
280 290 300 310 320 330
460 470 480 490 500 510
pF1KB5 VEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENY
340 350 360 370 380 390
520 530 540 550 560 570
pF1KB5 VHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDI
400 410 420 430 440 450
580 590 600 610 620
pF1KB5 GGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
460 470 480 490
>>NP_001308661 (OMIM: 608170,616871) probable ATP-depend (496 aa)
initn: 3296 init1: 3296 opt: 3296 Z-score: 3079.0 bits: 579.5 E(85289): 9.2e-165
Smith-Waterman score: 3296; 100.0% identity (100.0% similar) in 496 aa overlap (127-622:1-496)
100 110 120 130 140 150
pF1KB5 KAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMS
::::::::::::::::::::::::::::::
NP_001 MSVKEMAKGITYDDPIKTSWTPPRYVLSMS
10 20 30
160 170 180 190 200 210
pF1KB5 EERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTIL
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB5 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB5 LEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD
160 170 180 190 200 210
340 350 360 370 380 390
pF1KB5 ICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTI
220 230 240 250 260 270
400 410 420 430 440 450
pF1KB5 NVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKG
280 290 300 310 320 330
460 470 480 490 500 510
pF1KB5 VEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENY
340 350 360 370 380 390
520 530 540 550 560 570
pF1KB5 VHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDI
400 410 420 430 440 450
580 590 600 610 620
pF1KB5 GGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
460 470 480 490
>>NP_001091974 (OMIM: 608469) probable ATP-dependent RNA (731 aa)
initn: 890 init1: 313 opt: 932 Z-score: 873.8 bits: 172.1 E(85289): 6.2e-42
Smith-Waterman score: 932; 39.2% identity (66.4% similar) in 429 aa overlap (161-581:150-564)
140 150 160 170 180
pF1KB5 EMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGI-PPPIKSFKEMKFP
...:.: .: :.: . : :. .:.. .::
NP_001 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 AAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKR
.. : . . .::::: ::.: ::::::.::: :::::::.. ::.:. .:
NP_001 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 LPFSKR-EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCI-GGMSVKEQM
:. .: .:: :.. :.::::.:.. . . : . . :. :: :: :.
NP_001 -PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST-------CIYGGAPKGPQI
240 250 260 270 280
310 320 330 340 350 360
pF1KB5 ETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG
. ...::.. .::::::.:.:.. ..: : ::.:::::::.::::: .:: : . ..
NP_001 RDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRP
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 QRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKE---EAKMVY
.::::..::: ::.....:.. : . :::: .:. ...: :. : . :..
NP_001 DRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQ
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 LLE-CLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGK
:.: . . ..::.: : : . . . : :. ::: :.: :: ... :: ::
NP_001 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB5 KDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDE
.:.::::::.::: .. :::::.:. :.::::::::.:: : : : ::.. . .
NP_001 APILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLK
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 SVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQ
.. .: .: ::.: . : .... :. :: .:
NP_001 QA-RELIKVLEEANQAINP--KLMQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDE
530 540 550 560 570 580
610 620
pF1KB5 TKQVSNIGRKDYLAHSSMDF
NP_001 CDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAA
590 600 610 620 630 640
>>NP_006377 (OMIM: 608469) probable ATP-dependent RNA he (729 aa)
initn: 890 init1: 313 opt: 930 Z-score: 872.0 bits: 171.7 E(85289): 7.9e-42
Smith-Waterman score: 930; 40.1% identity (67.1% similar) in 414 aa overlap (161-566:150-551)
140 150 160 170 180
pF1KB5 EMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGI-PPPIKSFKEMKFP
...:.: .: :.: . : :. .:.. .::
NP_006 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 AAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKR
.. : . . .::::: ::.: ::::::.::: :::::::.. ::.:. .:
NP_006 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 LPFSKR-EGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCI-GGMSVKEQM
:. .: .:: :.. :.::::.:.. . . : . . :. :: :: :.
NP_006 -PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST-------CIYGGAPKGPQI
240 250 260 270 280
310 320 330 340 350 360
pF1KB5 ETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKG
. ...::.. .::::::.:.:.. ..: : ::.:::::::.::::: .:: : . ..
NP_006 RDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRP
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 QRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKE---EAKMVY
.::::..::: ::.....:.. : . :::: .:. ...: :. : . :..
NP_006 DRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQ
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 LLE-CLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGK
:.: . . ..::.: : : . . . : :. ::: :.: :: ... :: ::
NP_006 LMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB5 KDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDE
.:.::::::.::: .. :::::.:. :.::::::::.:: : : : ::.. . .
NP_006 APILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLK
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 SVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQ
.. .: .: ::.: . : :. :
NP_006 QA-RELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSRYRTTSSANNPNLMYQDECDRR
530 540 550 560 570 580
>>NP_001160006 (OMIM: 605281) probable ATP-dependent RNA (575 aa)
initn: 781 init1: 350 opt: 881 Z-score: 827.9 bits: 163.2 E(85289): 2.2e-39
Smith-Waterman score: 881; 34.5% identity (60.2% similar) in 533 aa overlap (64-584:24-543)
40 50 60 70 80 90
pF1KB5 VPYVPLRQRRQLLLQKLLQRRRKGAAEEEQQDSGSEPRGDED-DIPLGPQSNVSLLDQHQ
.. : :::.: : : . .:. ...
NP_001 MGSRNLFLTNSPESSNDCEDNPTRNRGFSKRGDNDLDPDECMQRTGGLFGSRR
10 20 30 40 50
100 110 120 130 140 150
pF1KB5 HLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYV
. . : ... :. .: ::: : .. .:: : ::.
NP_001 PVLSGTGNGDTSQSRSGSGSERDSWKSEAEGGE--SSDTQGPKVTYIPP-----PPPEDE
60 70 80 90 100
160 170 180 190 200
pF1KB5 LSMSEERHERVR-KKYH-ILVE--GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQ
:. . . . :: :::: : :: : .:.: .. .. .. : : . ::.:
NP_001 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB5 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLP-FSKREGPYGLIICPSR
.:: ::.:::... : :::::: .: ::.. ... :.. . : .:. :.:
NP_001 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTR
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB5 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL
::. : : . . . . .: .. :: .. .... : .: ... ::::::::.
NP_001 ELVNQI------YLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDI
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB5 LQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSY----FKGQRQTLLFSATMPKKIQ
. :. ..: .::.:::::::.:::: ... ..: : :::::.::::.:..::
NP_001 IGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQ
290 300 310 320 330 340
390 400 410 420 430 440
pF1KB5 NFAKSALVKP-VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPP-VLIFAEK
.: : . . . ::..:.: :: : : : . .: :.: :.. ...:.:
NP_001 RLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVET
350 360 370 380 390 400
450 460 470 480 490 500
pF1KB5 KADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAI
: .: : .: . . ...::: ..:.:: .:. :: :: :::::.::..:::. .
NP_001 KKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENV
410 420 430 440 450 460
510 520 530 540 550 560
pF1KB5 QHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPP
:::::.:.: :..:::::::::: :::: : .:.. :. . . : .: .:.: ::
NP_001 QHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPA
470 480 490 500 510 520
570 580 590 600 610 620
pF1KB5 VLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMD
:. . . :. :: .:
NP_001 WLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDDESWD
530 540 550 560 570
>>XP_011534230 (OMIM: 606286) PREDICTED: probable ATP-de (529 aa)
initn: 774 init1: 339 opt: 877 Z-score: 824.7 bits: 162.5 E(85289): 3.4e-39
Smith-Waterman score: 877; 37.0% identity (66.2% similar) in 438 aa overlap (141-563:74-498)
120 130 140 150 160
pF1KB5 KEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLS-MSEERHERVRKK-YH
::: .. . : ::. . . ::. ..
XP_011 VVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFN
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB5 ILVEG--DG----IPPPIKSFKE--MKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRD
: . :: :: : .: . . .: .....:: :...::::: :. : .:.: :
XP_011 ITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGID
110 120 130 140 150 160
230 240 250 260 270
pF1KB5 MIGIAFTGSGKTLVFTLP-VIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEY
.::.: ::.:::: . .: : . :. . ..:. : :.. :.:::: :..:
XP_011 LIGVAQTGTGKTLCYLMPGFIHLVLQPSLK---GQRNRPGMLVLTPTRELALQVEG---E
170 180 190 200 210
280 290 300 310 320 330
pF1KB5 YCRLLQEDSSPLLRCALCI-GGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDIC
:. : :: ..:. :: . ::.: ...:: ...:::::: :: ....:.:
XP_011 CCKY----SYKGLR-SVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNI
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV
::.:::::.:.::::: .: :. . .:::.. ::: :.... .:.: : .:. . :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB5 GRAGAASLDVI-QEVEYVKEEAKMVYLLECLQK--TPPPVLIFAEKKADVDAIHEYLLLK
: .... . :.. . :: : .. ::. . :..:. .:: .: . :.:
XP_011 GTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILG
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB5 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN
.. . ..:: ..:..: ::.: :. :: .:.:::.::.::: . :: :.:.:..::.
XP_011 NISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEE
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB5 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLD
::::::::::.: ::.. : ... : : .: .: .:.:..: :
XP_011 YVHRIGRTGRAGRTGVSITTLTRN-DWRVASELINILERANQSIPEELVSMAERFKAHQQ
460 470 480 490 500 510
580 590 600 610 620
pF1KB5 IGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
XP_011 KREMERKMERPQGRPKKFH
520
>>XP_011534229 (OMIM: 606286) PREDICTED: probable ATP-de (529 aa)
initn: 774 init1: 339 opt: 877 Z-score: 824.7 bits: 162.5 E(85289): 3.4e-39
Smith-Waterman score: 877; 37.0% identity (66.2% similar) in 438 aa overlap (141-563:74-498)
120 130 140 150 160
pF1KB5 KEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLS-MSEERHERVRKK-YH
::: .. . : ::. . . ::. ..
XP_011 VVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFN
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB5 ILVEG--DG----IPPPIKSFKE--MKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRD
: . :: :: : .: . . .: .....:: :...::::: :. : .:.: :
XP_011 ITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGID
110 120 130 140 150 160
230 240 250 260 270
pF1KB5 MIGIAFTGSGKTLVFTLP-VIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEY
.::.: ::.:::: . .: : . :. . ..:. : :.. :.:::: :..:
XP_011 LIGVAQTGTGKTLCYLMPGFIHLVLQPSLK---GQRNRPGMLVLTPTRELALQVEG---E
170 180 190 200 210
280 290 300 310 320 330
pF1KB5 YCRLLQEDSSPLLRCALCI-GGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDIC
:. : :: ..:. :: . ::.: ...:: ...:::::: :: ....:.:
XP_011 CCKY----SYKGLR-SVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNI
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 RYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV
::.:::::.:.::::: .: :. . .:::.. ::: :.... .:.: : .:. . :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB5 GRAGAASLDVI-QEVEYVKEEAKMVYLLECLQK--TPPPVLIFAEKKADVDAIHEYLLLK
: .... . :.. . :: : .. ::. . :..:. .:: .: . :.:
XP_011 GTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILG
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB5 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN
.. . ..:: ..:..: ::.: :. :: .:.:::.::.::: . :: :.:.:..::.
XP_011 NISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEE
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB5 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLD
::::::::::.: ::.. : ... : : .: .: .:.:..: :
XP_011 YVHRIGRTGRAGRTGVSITTLTRN-DWRVASELINILERANQSIPEELVSMAERFKAHQQ
460 470 480 490 500 510
580 590 600 610 620
pF1KB5 IGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
XP_011 KREMERKMERPQGRPKKFH
520
>>XP_011534228 (OMIM: 606286) PREDICTED: probable ATP-de (604 aa)
initn: 774 init1: 339 opt: 877 Z-score: 823.9 bits: 162.5 E(85289): 3.8e-39
Smith-Waterman score: 877; 37.0% identity (66.2% similar) in 438 aa overlap (141-563:149-573)
120 130 140 150 160
pF1KB5 KEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLS-MSEERHERVRKK-YH
::: .. . : ::. . . ::. ..
XP_011 AMQTKAKAVIDNFVKKLEENYNSECGIDLPPIKKNFYKESTATSAMSKVEADSWRKENFN
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 ILVEG--DG----IPPPIKSFKE--MKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRD
: . :: :: : .: . . .: .....:: :...::::: :. : .:.: :
XP_011 ITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGID
180 190 200 210 220 230
230 240 250 260 270
pF1KB5 MIGIAFTGSGKTLVFTLP-VIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEY
.::.: ::.:::: . .: : . :. . ..:. : :.. :.:::: :..:
XP_011 LIGVAQTGTGKTLCYLMPGFIHLVLQPSLK---GQRNRPGMLVLTPTRELALQVEG---E
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB5 YCRLLQEDSSPLLRCALCI-GGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDIC
:. : :: ..:. :: . ::.: ...:: ...:::::: :: ....:.:
XP_011 CCKY----SYKGLR-SVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNI
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 RYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV
::.:::::.:.::::: .: :. . .:::.. ::: :.... .:.: : .:. . :
XP_011 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
350 360 370 380 390 400
400 410 420 430 440 450
pF1KB5 GRAGAASLDVI-QEVEYVKEEAKMVYLLECLQK--TPPPVLIFAEKKADVDAIHEYLLLK
: .... . :.. . :: : .. ::. . :..:. .:: .: . :.:
XP_011 GTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILG
410 420 430 440 450 460
460 470 480 490 500 510
pF1KB5 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN
.. . ..:: ..:..: ::.: :. :: .:.:::.::.::: . :: :.:.:..::.
XP_011 NISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEE
470 480 490 500 510 520
520 530 540 550 560 570
pF1KB5 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLD
::::::::::.: ::.. : ... : : .: .: .:.:..: :
XP_011 YVHRIGRTGRAGRTGVSITTLTRN-DWRVASELINILERANQSIPEELVSMAERFKAHQQ
530 540 550 560 570 580
580 590 600 610 620
pF1KB5 IGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
XP_011 KREMERKMERPQGRPKKFH
590 600
>>NP_061135 (OMIM: 606286) probable ATP-dependent RNA he (648 aa)
initn: 774 init1: 339 opt: 877 Z-score: 823.4 bits: 162.6 E(85289): 4e-39
Smith-Waterman score: 877; 37.0% identity (66.2% similar) in 438 aa overlap (141-563:193-617)
120 130 140 150 160
pF1KB5 KEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLS-MSEERHERVRKK-YH
::: .. . : ::. . . ::. ..
NP_061 VVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFN
170 180 190 200 210 220
170 180 190 200 210 220
pF1KB5 ILVEG--DG----IPPPIKSFKE--MKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRD
: . :: :: : .: . . .: .....:: :...::::: :. : .:.: :
NP_061 ITWDDLKDGEKRPIPNPTCTFDDAFQCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGID
230 240 250 260 270 280
230 240 250 260 270
pF1KB5 MIGIAFTGSGKTLVFTLP-VIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEY
.::.: ::.:::: . .: : . :. . ..:. : :.. :.:::: :..:
NP_061 LIGVAQTGTGKTLCYLMPGFIHLVLQPSLK---GQRNRPGMLVLTPTRELALQVEG---E
290 300 310 320 330
280 290 300 310 320 330
pF1KB5 YCRLLQEDSSPLLRCALCI-GGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDIC
:. : :: ..:. :: . ::.: ...:: ...:::::: :: ....:.:
NP_061 CCKY----SYKGLR-SVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNI
340 350 360 370 380 390
340 350 360 370 380 390
pF1KB5 RYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV
::.:::::.:.::::: .: :. . .:::.. ::: :.... .:.: : .:. . :
NP_061 TYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYV
400 410 420 430 440 450
400 410 420 430 440 450
pF1KB5 GRAGAASLDVI-QEVEYVKEEAKMVYLLECLQK--TPPPVLIFAEKKADVDAIHEYLLLK
: .... . :.. . :: : .. ::. . :..:. .:: .: . :.:
NP_061 GTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILG
460 470 480 490 500 510
460 470 480 490 500 510
pF1KB5 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN
.. . ..:: ..:..: ::.: :. :: .:.:::.::.::: . :: :.:.:..::.
NP_061 NISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEE
520 530 540 550 560 570
520 530 540 550 560 570
pF1KB5 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLD
::::::::::.: ::.. : ... : : .: .: .:.:..: :
NP_061 YVHRIGRTGRAGRTGVSITTLTRN-DWRVASELINILERANQSIPEELVSMAERFKAHQQ
580 590 600 610 620
580 590 600 610 620
pF1KB5 IGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
NP_061 KREMERKMERPQGRPKKFH
630 640
622 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:32:58 2016 done: Sat Nov 5 19:33:00 2016
Total Scan time: 11.940 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]