Result of FASTA (omim) for
pF1KB5023
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5023, 329 aa
1>>>pF1KB5023 329 - 329 aa - 329 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6518+/-0.000452; mu= 19.9288+/- 0.028
mean_var=68.3349+/-14.130, 0's: 0 Z-trim(109.3): 70 B-trim: 0 in 0/51
Lambda= 0.155150
statistics sampled from 17411 (17481) to 17411 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.568), E-opt: 0.2 (0.205), width: 16
Scan time: 6.550
The best scores are: opt bits E(85289)
NP_001123514 (OMIM: 123691) quinone oxidoreductase ( 329) 2113 482.3 6e-136
XP_011539049 (OMIM: 123691) PREDICTED: quinone oxi ( 329) 2113 482.3 6e-136
NP_001880 (OMIM: 123691) quinone oxidoreductase is ( 329) 2113 482.3 6e-136
NP_001123515 (OMIM: 123691) quinone oxidoreductase ( 295) 1381 318.4 1.2e-86
XP_016855856 (OMIM: 123691) PREDICTED: quinone oxi ( 295) 1381 318.4 1.2e-86
XP_005270548 (OMIM: 123691) PREDICTED: quinone oxi ( 192) 1190 275.5 6.3e-74
XP_016855857 (OMIM: 123691) PREDICTED: quinone oxi ( 192) 1190 275.5 6.3e-74
NP_001128231 (OMIM: 123691) quinone oxidoreductase ( 192) 1190 275.5 6.3e-74
NP_006364 (OMIM: 604631) synaptic vesicle membrane ( 393) 525 126.9 6.8e-29
NP_004872 (OMIM: 605171) quinone oxidoreductase PI ( 332) 381 94.6 3e-19
NP_671713 (OMIM: 605171) quinone oxidoreductase PI ( 332) 381 94.6 3e-19
NP_001193731 (OMIM: 605171) quinone oxidoreductase ( 248) 313 79.3 9.4e-15
XP_006712213 (OMIM: 605171) PREDICTED: quinone oxi ( 248) 313 79.3 9.4e-15
NP_057095 (OMIM: 608205) trans-2-enoyl-CoA reducta ( 373) 275 71.0 4.6e-12
XP_011539842 (OMIM: 608205) PREDICTED: trans-2-eno ( 431) 268 69.4 1.5e-11
XP_005245942 (OMIM: 608205) PREDICTED: trans-2-eno ( 401) 262 68.1 3.6e-11
XP_011539843 (OMIM: 608205) PREDICTED: trans-2-eno ( 364) 261 67.8 4e-11
XP_011539841 (OMIM: 608205) PREDICTED: trans-2-eno ( 459) 255 66.6 1.2e-10
XP_016856902 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 251 65.5 1.6e-10
XP_005245944 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 251 65.5 1.6e-10
XP_016856903 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 251 65.5 1.6e-10
XP_016856904 (OMIM: 608205) PREDICTED: trans-2-eno ( 297) 251 65.5 1.6e-10
NP_001019903 (OMIM: 608205) trans-2-enoyl-CoA redu ( 297) 251 65.5 1.6e-10
XP_016856905 (OMIM: 608205) PREDICTED: trans-2-eno ( 260) 250 65.2 1.7e-10
XP_011539856 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_016856900 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_016856901 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539847 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539848 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539855 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539849 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539845 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539852 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
XP_011539851 (OMIM: 608205) PREDICTED: trans-2-eno ( 355) 244 64.0 5.4e-10
NP_004095 (OMIM: 600212) fatty acid synthase [Homo (2511) 251 66.3 7.5e-10
XP_011521840 (OMIM: 600212) PREDICTED: fatty acid (2511) 251 66.3 7.5e-10
XP_011516696 (OMIM: 601274) PREDICTED: prostagland ( 254) 238 62.5 1.1e-09
XP_016869974 (OMIM: 601274) PREDICTED: prostagland ( 254) 238 62.5 1.1e-09
NP_001139581 (OMIM: 601274) prostaglandin reductas ( 301) 238 62.6 1.2e-09
NP_036344 (OMIM: 601274) prostaglandin reductase 1 ( 329) 238 62.6 1.3e-09
NP_001139580 (OMIM: 601274) prostaglandin reductas ( 329) 238 62.6 1.3e-09
NP_665857 (OMIM: 603920) quinone oxidoreductase-li ( 349) 236 62.2 1.9e-09
XP_016866865 (OMIM: 610502,616732) PREDICTED: reti ( 288) 211 56.5 7.8e-08
NP_001305675 (OMIM: 610502,616732) reticulon-4-int ( 296) 211 56.5 8e-08
XP_011534494 (OMIM: 610502,616732) PREDICTED: reti ( 316) 211 56.6 8.3e-08
XP_005264707 (OMIM: 605171) PREDICTED: quinone oxi ( 243) 203 54.7 2.4e-07
XP_011516697 (OMIM: 601274) PREDICTED: prostagland ( 206) 197 53.3 5.4e-07
NP_000658 (OMIM: 103700) alcohol dehydrogenase 1A ( 375) 170 47.5 5.5e-05
NP_000661 (OMIM: 103740) alcohol dehydrogenase 4 i ( 380) 151 43.2 0.0011
NP_001293100 (OMIM: 103740) alcohol dehydrogenase ( 399) 151 43.2 0.0011
>>NP_001123514 (OMIM: 123691) quinone oxidoreductase iso (329 aa)
initn: 2113 init1: 2113 opt: 2113 Z-score: 2561.7 bits: 482.3 E(85289): 6e-136
Smith-Waterman score: 2113; 99.7% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
NP_001 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
250 260 270 280 290 300
310 320
pF1KB5 SQYPLEKVAEAHENIIHGSGATGKMILLL
:::::::::::::::::::::::::::::
NP_001 SQYPLEKVAEAHENIIHGSGATGKMILLL
310 320
>>XP_011539049 (OMIM: 123691) PREDICTED: quinone oxidore (329 aa)
initn: 2113 init1: 2113 opt: 2113 Z-score: 2561.7 bits: 482.3 E(85289): 6e-136
Smith-Waterman score: 2113; 99.7% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_011 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
250 260 270 280 290 300
310 320
pF1KB5 SQYPLEKVAEAHENIIHGSGATGKMILLL
:::::::::::::::::::::::::::::
XP_011 SQYPLEKVAEAHENIIHGSGATGKMILLL
310 320
>>NP_001880 (OMIM: 123691) quinone oxidoreductase isofor (329 aa)
initn: 2113 init1: 2113 opt: 2113 Z-score: 2561.7 bits: 482.3 E(85289): 6e-136
Smith-Waterman score: 2113; 99.7% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
NP_001 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
250 260 270 280 290 300
310 320
pF1KB5 SQYPLEKVAEAHENIIHGSGATGKMILLL
:::::::::::::::::::::::::::::
NP_001 SQYPLEKVAEAHENIIHGSGATGKMILLL
310 320
>>NP_001123515 (OMIM: 123691) quinone oxidoreductase iso (295 aa)
initn: 1367 init1: 1367 opt: 1381 Z-score: 1676.8 bits: 318.4 E(85289): 1.2e-86
Smith-Waterman score: 1826; 89.4% identity (89.7% similar) in 329 aa overlap (1-329:1-295)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
NP_001 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
::::::::::::::::::::::::::::::
NP_001 GTEEGQKIVLQNGAHEVFNHREVNYIDKIK------------------------------
190 200 210
250 260 270 280 290 300
pF1KB5 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----VVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
220 230 240 250 260
310 320
pF1KB5 SQYPLEKVAEAHENIIHGSGATGKMILLL
:::::::::::::::::::::::::::::
NP_001 SQYPLEKVAEAHENIIHGSGATGKMILLL
270 280 290
>>XP_016855856 (OMIM: 123691) PREDICTED: quinone oxidore (295 aa)
initn: 1367 init1: 1367 opt: 1381 Z-score: 1676.8 bits: 318.4 E(85289): 1.2e-86
Smith-Waterman score: 1826; 89.4% identity (89.7% similar) in 329 aa overlap (1-329:1-295)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_016 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
::::::::::::::::::::::::::::::
XP_016 GTEEGQKIVLQNGAHEVFNHREVNYIDKIK------------------------------
190 200 210
250 260 270 280 290 300
pF1KB5 GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ----VVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
220 230 240 250 260
310 320
pF1KB5 SQYPLEKVAEAHENIIHGSGATGKMILLL
:::::::::::::::::::::::::::::
XP_016 SQYPLEKVAEAHENIIHGSGATGKMILLL
270 280 290
>>XP_005270548 (OMIM: 123691) PREDICTED: quinone oxidore (192 aa)
initn: 1190 init1: 1190 opt: 1190 Z-score: 1448.2 bits: 275.5 E(85289): 6.3e-74
Smith-Waterman score: 1190; 98.4% identity (99.5% similar) in 190 aa overlap (140-329:3-192)
110 120 130 140 150 160
pF1KB5 ADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA
:. :::::::::::::::::::::::::::
XP_005 MHLLSSACVKAGESVLVHGASGGVGLAACQIA
10 20 30
170 180 190 200 210 220
pF1KB5 RAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
100 110 120 130 140 150
290 300 310 320
pF1KB5 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
::::::::::::::::::::::::::::::::::::::::
XP_005 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
160 170 180 190
>>XP_016855857 (OMIM: 123691) PREDICTED: quinone oxidore (192 aa)
initn: 1190 init1: 1190 opt: 1190 Z-score: 1448.2 bits: 275.5 E(85289): 6.3e-74
Smith-Waterman score: 1190; 98.4% identity (99.5% similar) in 190 aa overlap (140-329:3-192)
110 120 130 140 150 160
pF1KB5 ADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA
:. :::::::::::::::::::::::::::
XP_016 MHLLSSACVKAGESVLVHGASGGVGLAACQIA
10 20 30
170 180 190 200 210 220
pF1KB5 RAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
100 110 120 130 140 150
290 300 310 320
pF1KB5 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
::::::::::::::::::::::::::::::::::::::::
XP_016 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
160 170 180 190
>>NP_001128231 (OMIM: 123691) quinone oxidoreductase iso (192 aa)
initn: 1190 init1: 1190 opt: 1190 Z-score: 1448.2 bits: 275.5 E(85289): 6.3e-74
Smith-Waterman score: 1190; 98.4% identity (99.5% similar) in 190 aa overlap (140-329:3-192)
110 120 130 140 150 160
pF1KB5 ADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIA
:. :::::::::::::::::::::::::::
NP_001 MHLLSSACVKAGESVLVHGASGGVGLAACQIA
10 20 30
170 180 190 200 210 220
pF1KB5 RAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN
40 50 60 70 80 90
230 240 250 260 270 280
pF1KB5 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG
100 110 120 130 140 150
290 300 310 320
pF1KB5 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
::::::::::::::::::::::::::::::::::::::::
NP_001 MEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
160 170 180 190
>>NP_006364 (OMIM: 604631) synaptic vesicle membrane pro (393 aa)
initn: 444 init1: 207 opt: 525 Z-score: 639.7 bits: 126.9 E(85289): 6.8e-29
Smith-Waterman score: 552; 32.1% identity (65.6% similar) in 349 aa overlap (2-328:42-386)
10 20 30
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVP
:.. :.: . . ::: . .::.: :.:
NP_006 TGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAP
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB5 -IPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKG
: :. ....:::.: .. . :.: :.: : :: ::: . :::. :::...: : :
NP_006 PAPGPGQLTLRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAG
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB5 DRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGE
:::.. . :: . : . . . .. .:: . :...::. . :.::: .:. . .. :.
NP_006 DRVMVLNR-SGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGH
140 150 160 170 180 190
160 170 180 190 200
pF1KB5 SVLVHGASGGVGLAACQIARAY-GLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKI
::::: :.::::.:: :. :. .. :.:::.. . .. . .::. . .... ..:.:.:
NP_006 SVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASK-HEALKENGVTHPIDYHTTDYVDEI
200 210 220 230 240
210 220 230 240 250 260
pF1KB5 KKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMA------KE
:: .. ::.::... :.. . .: .::. :.:.. : . . :. :: ..
NP_006 KK-ISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQ
250 260 270 280 290 300
270 280 290 300
pF1KB5 SSIIGVTLFSSTK--------------EEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVA
:. .. :..... : . .: : : .. : .:: : : .:.::::
NP_006 FSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVA
310 320 330 340 350 360
310 320
pF1KB5 EAHENIIHGSGATGKMILLL
.: ... . . .::..:.
NP_006 DAMKQM-QEKKNVGKVLLVPGPEKEN
370 380 390
>>NP_004872 (OMIM: 605171) quinone oxidoreductase PIG3 i (332 aa)
initn: 333 init1: 264 opt: 381 Z-score: 466.5 bits: 94.6 E(85289): 3e-19
Smith-Waterman score: 413; 28.2% identity (59.2% similar) in 333 aa overlap (8-329:1-330)
10 20 30 40 50 60
pF1KB5 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
: ::. . :::: : .. ..: : : . .::.:: : ..: .. . :.: :.
NP_004 MLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYD
10 20 30 40 50
70 80 90 100 110
pF1KB5 RKPLLPYTPGSDVAGVIEAVGDNASA-FKKGDRVFTSSTISGGYAEYALAADHTVYKLPE
: : ...: . .: . .. .: :: .. . .:: :.:. . . .. .::
NP_004 PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAM-ALLPGGGQAQYVTVPEGLLMPIPE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKVLGT
: . :.::: ..::.. : . :.::. ::.:.. .::: :: :..: : : :
NP_004 GLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSH
::... ... . :: ::... .. . :.. :...:.. ... :... :.
NP_004 AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLAL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 GGRVIVVGSRGTIEIN-P--RDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGW--
:: .. : : .:: : . :..:.: : : .. :. . :. . .
NP_004 DGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFST
240 250 260 270 280 290
300 310 320
pF1KB5 -----LKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL
: ::. ::. .. :::. .... ::..: :
NP_004 EGPQRLLPVLDRIYPVTEIQEAHK-YMEANKNIGKIVLELPQ
300 310 320 330
329 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:17:09 2016 done: Sat Nov 5 06:17:10 2016
Total Scan time: 6.550 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]