Result of FASTA (omim) for
pF1KB4917
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4917, 323 aa
1>>>pF1KB4917 323 - 323 aa - 323 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0953+/-0.000369; mu= 17.8128+/- 0.023
mean_var=77.8819+/-15.616, 0's: 0 Z-trim(114.4): 251 B-trim: 958 in 1/48
Lambda= 0.145330
statistics sampled from 23857 (24153) to 23857 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.283), width: 16
Scan time: 7.980
The best scores are: opt bits E(85289)
NP_001177989 (OMIM: 609302,609304) mitochondrial g ( 323) 2094 448.5 8.9e-126
NP_078974 (OMIM: 609302,609304) mitochondrial glut ( 323) 2094 448.5 8.9e-126
XP_011518671 (OMIM: 609302,609304) PREDICTED: mito ( 323) 2094 448.5 8.9e-126
NP_001177990 (OMIM: 609302,609304) mitochondrial g ( 323) 2094 448.5 8.9e-126
XP_011518672 (OMIM: 609302,609304) PREDICTED: mito ( 323) 2094 448.5 8.9e-126
XP_011518673 (OMIM: 609302,609304) PREDICTED: mito ( 323) 2094 448.5 8.9e-126
XP_011544454 (OMIM: 609303) PREDICTED: mitochondri ( 315) 1347 291.8 1.2e-78
NP_113669 (OMIM: 609303) mitochondrial glutamate c ( 315) 1347 291.8 1.2e-78
XP_016884457 (OMIM: 609303) PREDICTED: mitochondri ( 315) 1347 291.8 1.2e-78
XP_011544453 (OMIM: 609303) PREDICTED: mitochondri ( 315) 1347 291.8 1.2e-78
XP_011544456 (OMIM: 609303) PREDICTED: mitochondri ( 315) 1347 291.8 1.2e-78
NP_001290413 (OMIM: 609303) mitochondrial glutamat ( 315) 1347 291.8 1.2e-78
XP_011544455 (OMIM: 609303) PREDICTED: mitochondri ( 315) 1347 291.8 1.2e-78
XP_011544452 (OMIM: 609303) PREDICTED: mitochondri ( 366) 1347 291.9 1.4e-78
XP_011544451 (OMIM: 609303) PREDICTED: mitochondri ( 410) 1347 291.9 1.5e-78
XP_016884461 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884460 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884463 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884464 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884458 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884462 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
XP_016884459 (OMIM: 609303) PREDICTED: mitochondri ( 272) 1143 249.0 8.3e-66
NP_997000 (OMIM: 609911) solute carrier family 25 ( 308) 415 96.4 8.1e-20
XP_016867153 (OMIM: 603471,603859,605814) PREDICTE ( 391) 390 91.3 3.6e-18
XP_016867154 (OMIM: 603471,603859,605814) PREDICTE ( 391) 390 91.3 3.6e-18
XP_016867152 (OMIM: 603471,603859,605814) PREDICTE ( 672) 390 91.5 5.4e-18
NP_055066 (OMIM: 603471,603859,605814) calcium-bin ( 675) 390 91.5 5.4e-18
NP_001153682 (OMIM: 603471,603859,605814) calcium- ( 676) 390 91.5 5.5e-18
XP_006715894 (OMIM: 603471,603859,605814) PREDICTE ( 686) 390 91.5 5.5e-18
XP_011510372 (OMIM: 603667,612949) PREDICTED: calc ( 587) 389 91.2 5.7e-18
NP_003696 (OMIM: 603667,612949) calcium-binding mi ( 678) 389 91.3 6.3e-18
XP_016864575 (OMIM: 616150) PREDICTED: solute carr ( 311) 318 76.1 1.1e-13
XP_006714609 (OMIM: 616150) PREDICTED: solute carr ( 311) 318 76.1 1.1e-13
XP_016864577 (OMIM: 616150) PREDICTED: solute carr ( 311) 318 76.1 1.1e-13
XP_016864576 (OMIM: 616150) PREDICTED: solute carr ( 311) 318 76.1 1.1e-13
XP_011514029 (OMIM: 603471,603859,605814) PREDICTE ( 456) 302 72.9 1.5e-12
XP_006714613 (OMIM: 616150) PREDICTED: solute carr ( 276) 287 69.5 8.9e-12
XP_016864579 (OMIM: 616150) PREDICTED: solute carr ( 257) 274 66.8 5.6e-11
NP_115691 (OMIM: 610816) solute carrier family 25 ( 321) 269 65.8 1.4e-10
XP_011508482 (OMIM: 610824) PREDICTED: solute carr ( 322) 260 63.9 5.1e-10
XP_011508483 (OMIM: 610824) PREDICTED: solute carr ( 322) 260 63.9 5.1e-10
NP_001273113 (OMIM: 610824) solute carrier family ( 322) 260 63.9 5.1e-10
XP_006711720 (OMIM: 610824) PREDICTED: solute carr ( 322) 260 63.9 5.1e-10
NP_077008 (OMIM: 608746) calcium-binding mitochond ( 468) 259 63.9 7.7e-10
XP_011526586 (OMIM: 608746) PREDICTED: calcium-bin ( 469) 259 63.9 7.7e-10
XP_016882777 (OMIM: 608746) PREDICTED: calcium-bin ( 484) 259 63.9 7.9e-10
XP_011526585 (OMIM: 608746) PREDICTED: calcium-bin ( 490) 259 63.9 8e-10
XP_011526584 (OMIM: 608746) PREDICTED: calcium-bin ( 503) 259 63.9 8.1e-10
XP_011526583 (OMIM: 608746) PREDICTED: calcium-bin ( 515) 259 63.9 8.3e-10
XP_011526582 (OMIM: 608746) PREDICTED: calcium-bin ( 531) 259 63.9 8.5e-10
>>NP_001177989 (OMIM: 609302,609304) mitochondrial gluta (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
NP_001 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>NP_078974 (OMIM: 609302,609304) mitochondrial glutamat (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
NP_078 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>XP_011518671 (OMIM: 609302,609304) PREDICTED: mitochon (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
XP_011 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>NP_001177990 (OMIM: 609302,609304) mitochondrial gluta (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
NP_001 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>XP_011518672 (OMIM: 609302,609304) PREDICTED: mitochon (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
XP_011 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>XP_011518673 (OMIM: 609302,609304) PREDICTED: mitochon (323 aa)
initn: 2094 init1: 2094 opt: 2094 Z-score: 2379.1 bits: 448.5 E(85289): 8.9e-126
Smith-Waterman score: 2094; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFG
250 260 270 280 290 300
310 320
pF1KB4 IAQVVYFLGIAESLLGLLQDPQA
:::::::::::::::::::::::
XP_011 IAQVVYFLGIAESLLGLLQDPQA
310 320
>>XP_011544454 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 1159 init1: 674 opt: 1347 Z-score: 1532.8 bits: 291.8 E(85289): 1.2e-78
Smith-Waterman score: 1347; 65.6% identity (84.9% similar) in 317 aa overlap (1-315:1-311)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
:. ...:. :::::::.:::.::::::::::::::::::. :. .: .: :::.::.:.:
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH-GKAMYKGMIDCLMKTARAE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
:.:::::::::::::::::::::::::::::. : .::.. .: ::::::::: :::.:
XP_011 GFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVV
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAP--RPTATQLTRDLL
: ::::::::::::::.:... ::. :: . .. . . :. ::.:: .. .::
XP_011 TCPMEMLKIQLQDAGRLAVHH-----QGSASAPSTSRSYTTGSASTHRRPSATLIAWELL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSA
:..:.::::.:::::::::.:::..:::::::::.:: :. : ::..::::::
XP_011 RTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPL
:::::.: ::.:::.:.:..:..:: :::: :::::. .::::::.::: :::::::::
XP_011 AAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPL
240 250 260 270 280 290
300 310 320
pF1KB4 FGIAQVVYFLGIAESLLGLLQDPQA
::::: :::.::.: .:
XP_011 FGIAQGVYFIGIGERILKCFD
300 310
>>NP_113669 (OMIM: 609303) mitochondrial glutamate carri (315 aa)
initn: 1159 init1: 674 opt: 1347 Z-score: 1532.8 bits: 291.8 E(85289): 1.2e-78
Smith-Waterman score: 1347; 65.6% identity (84.9% similar) in 317 aa overlap (1-315:1-311)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
:. ...:. :::::::.:::.::::::::::::::::::. :. .: .: :::.::.:.:
NP_113 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH-GKAMYKGMIDCLMKTARAE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
:.:::::::::::::::::::::::::::::. : .::.. .: ::::::::: :::.:
NP_113 GFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVV
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAP--RPTATQLTRDLL
: ::::::::::::::.:... ::. :: . .. . . :. ::.:: .. .::
NP_113 TCPMEMLKIQLQDAGRLAVHH-----QGSASAPSTSRSYTTGSASTHRRPSATLIAWELL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSA
:..:.::::.:::::::::.:::..:::::::::.:: :. : ::..::::::
NP_113 RTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPL
:::::.: ::.:::.:.:..:..:: :::: :::::. .::::::.::: :::::::::
NP_113 AAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPL
240 250 260 270 280 290
300 310 320
pF1KB4 FGIAQVVYFLGIAESLLGLLQDPQA
::::: :::.::.: .:
NP_113 FGIAQGVYFIGIGERILKCFD
300 310
>>XP_016884457 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 1159 init1: 674 opt: 1347 Z-score: 1532.8 bits: 291.8 E(85289): 1.2e-78
Smith-Waterman score: 1347; 65.6% identity (84.9% similar) in 317 aa overlap (1-315:1-311)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
:. ...:. :::::::.:::.::::::::::::::::::. :. .: .: :::.::.:.:
XP_016 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH-GKAMYKGMIDCLMKTARAE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
:.:::::::::::::::::::::::::::::. : .::.. .: ::::::::: :::.:
XP_016 GFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVV
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAP--RPTATQLTRDLL
: ::::::::::::::.:... ::. :: . .. . . :. ::.:: .. .::
XP_016 TCPMEMLKIQLQDAGRLAVHH-----QGSASAPSTSRSYTTGSASTHRRPSATLIAWELL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSA
:..:.::::.:::::::::.:::..:::::::::.:: :. : ::..::::::
XP_016 RTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPL
:::::.: ::.:::.:.:..:..:: :::: :::::. .::::::.::: :::::::::
XP_016 AAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPL
240 250 260 270 280 290
300 310 320
pF1KB4 FGIAQVVYFLGIAESLLGLLQDPQA
::::: :::.::.: .:
XP_016 FGIAQGVYFIGIGERILKCFD
300 310
>>XP_011544453 (OMIM: 609303) PREDICTED: mitochondrial g (315 aa)
initn: 1159 init1: 674 opt: 1347 Z-score: 1532.8 bits: 291.8 E(85289): 1.2e-78
Smith-Waterman score: 1347; 65.6% identity (84.9% similar) in 317 aa overlap (1-315:1-311)
10 20 30 40 50 60
pF1KB4 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSE
:. ...:. :::::::.:::.::::::::::::::::::. :. .: .: :::.::.:.:
XP_011 MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH-GKAMYKGMIDCLMKTARAE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 GYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIV
:.:::::::::::::::::::::::::::::. : .::.. .: ::::::::: :::.:
XP_011 GFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVV
60 70 80 90 100 110
130 140 150 160 170
pF1KB4 TTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAP--RPTATQLTRDLL
: ::::::::::::::.:... ::. :: . .. . . :. ::.:: .. .::
XP_011 TCPMEMLKIQLQDAGRLAVHH-----QGSASAPSTSRSYTTGSASTHRRPSATLIAWELL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSA
:..:.::::.:::::::::.:::..:::::::::.:: :. : ::..::::::
XP_011 RTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPL
:::::.: ::.:::.:.:..:..:: :::: :::::. .::::::.::: :::::::::
XP_011 AAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPL
240 250 260 270 280 290
300 310 320
pF1KB4 FGIAQVVYFLGIAESLLGLLQDPQA
::::: :::.::.: .:
XP_011 FGIAQGVYFIGIGERILKCFD
300 310
323 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:06:55 2016 done: Sat Nov 5 06:06:56 2016
Total Scan time: 7.980 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]