Result of FASTA (ccds) for
pF1KB4902
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4902, 744 aa
1>>>pF1KB4902 744 - 744 aa - 744 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6514+/-0.00117; mu= 17.9931+/- 0.071
mean_var=73.8193+/-14.696, 0's: 0 Z-trim(102.0): 60 B-trim: 0 in 0/49
Lambda= 0.149276
statistics sampled from 6716 (6774) to 6716 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.565), E-opt: 0.2 (0.208), width: 16
Scan time: 3.880
The best scores are: opt bits E(32554)
CCDS42354.1 NSF gene_id:4905|Hs108|chr17 ( 744) 4824 1049.1 0
CCDS6573.1 VCP gene_id:7415|Hs108|chr9 ( 806) 540 126.6 1.6e-28
CCDS56043.1 PSMC5 gene_id:5705|Hs108|chr17 ( 398) 472 111.8 2.2e-24
CCDS11645.1 PSMC5 gene_id:5705|Hs108|chr17 ( 406) 472 111.8 2.2e-24
CCDS81837.1 PSMC1 gene_id:5700|Hs108|chr14 ( 367) 463 109.8 7.8e-24
CCDS32139.1 PSMC1 gene_id:5700|Hs108|chr14 ( 440) 463 109.8 9.1e-24
CCDS9710.2 PSMC6 gene_id:5706|Hs108|chr14 ( 403) 450 107.0 5.9e-23
CCDS11859.1 AFG3L2 gene_id:10939|Hs108|chr18 ( 797) 442 105.5 3.5e-22
CCDS5731.1 PSMC2 gene_id:5701|Hs108|chr7 ( 433) 437 104.2 4.4e-22
CCDS46076.1 PSMC4 gene_id:5704|Hs108|chr19 ( 387) 433 103.4 7.2e-22
CCDS12547.1 PSMC4 gene_id:5704|Hs108|chr19 ( 418) 433 103.4 7.7e-22
CCDS3730.1 SPATA5 gene_id:166378|Hs108|chr4 ( 893) 432 103.3 1.7e-21
CCDS7935.1 PSMC3 gene_id:5702|Hs108|chr11 ( 439) 426 101.9 2.3e-21
CCDS10977.1 SPG7 gene_id:6687|Hs108|chr16 ( 795) 412 99.0 3e-20
CCDS46227.1 ATAD2B gene_id:54454|Hs108|chr2 (1458) 405 97.6 1.4e-19
CCDS6343.1 ATAD2 gene_id:29028|Hs108|chr8 (1390) 390 94.4 1.3e-18
CCDS4877.1 PEX6 gene_id:5190|Hs108|chr6 ( 980) 378 91.7 5.8e-18
CCDS64710.1 PEX1 gene_id:5189|Hs108|chr7 (1226) 337 82.9 3.2e-15
CCDS5627.1 PEX1 gene_id:5189|Hs108|chr7 (1283) 337 83.0 3.3e-15
CCDS58062.1 NVL gene_id:4931|Hs108|chr1 ( 667) 330 81.3 5.4e-15
CCDS1542.1 NVL gene_id:4931|Hs108|chr1 ( 750) 330 81.3 6e-15
CCDS58063.1 NVL gene_id:4931|Hs108|chr1 ( 765) 330 81.3 6.1e-15
CCDS1541.1 NVL gene_id:4931|Hs108|chr1 ( 856) 330 81.4 6.7e-15
CCDS81877.1 SPATA5L1 gene_id:79029|Hs108|chr15 ( 620) 307 76.3 1.6e-13
CCDS10123.1 SPATA5L1 gene_id:79029|Hs108|chr15 ( 753) 307 76.4 1.9e-13
CCDS58072.1 YME1L1 gene_id:10730|Hs108|chr10 ( 683) 279 70.3 1.1e-11
CCDS7151.1 YME1L1 gene_id:10730|Hs108|chr10 ( 716) 279 70.3 1.2e-11
CCDS7152.1 YME1L1 gene_id:10730|Hs108|chr10 ( 773) 279 70.3 1.2e-11
>>CCDS42354.1 NSF gene_id:4905|Hs108|chr17 (744 aa)
initn: 4824 init1: 4824 opt: 4824 Z-score: 5612.5 bits: 1049.1 E(32554): 0
Smith-Waterman score: 4824; 100.0% identity (100.0% similar) in 744 aa overlap (1-744:1-744)
10 20 30 40 50 60
pF1KB4 MAGRSMQAARCPTDELSLTNCAVVNEKDFQSGQHVIVRTSPNHRYTFTLKTHPSVVPGSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAGRSMQAARCPTDELSLTNCAVVNEKDFQSGQHVIVRTSPNHRYTFTLKTHPSVVPGSI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 AFSLPQRKWAGLSIGQEIEVSLYTFDKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AFSLPQRKWAGLSIGQEIEVSLYTFDKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 FIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 PPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 NIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 SADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDF
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 LASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 LEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 VVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 FSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQM
670 680 690 700 710 720
730 740
pF1KB4 DPEYRVRKFLALLREEGASPLDFD
::::::::::::::::::::::::
CCDS42 DPEYRVRKFLALLREEGASPLDFD
730 740
>>CCDS6573.1 VCP gene_id:7415|Hs108|chr9 (806 aa)
initn: 586 init1: 247 opt: 540 Z-score: 625.8 bits: 126.6 E(32554): 1.6e-28
Smith-Waterman score: 658; 34.4% identity (61.6% similar) in 425 aa overlap (242-652:227-629)
220 230 240 250 260 270
pF1KB4 DWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLAR
: . . .: : .::::::::: ::::.::
CCDS65 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR
200 210 220 230 240 250
280 290 300 310 320 330
pF1KB4 QIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEID
... .: ..:::::..: .::::.:.:: : .::. .. ::..::.:
CCDS65 AVANETGAFFF-LINGPEIMSKLAGESESNLRKAFEEAEK--------NAPAIIFIDELD
260 270 280 290 300
340 350 360 370 380 390
pF1KB4 AICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEV
:: .: . : :. .:.:::. .::..: ...:.. ::::. :: :: : ::..
CCDS65 AIAPKREKTHGE--VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDR
310 320 330 340 350 360
400 410 420 430 440 450
pF1KB4 KMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQST
...::.:: :::.::.::: :. :. :::....: ::.. ::.: .: :
CCDS65 EVDIGIPDATGRLEILQIHTKNMK----LADDVDLEQVANETHGHVGADLAALCSEAALQ
370 380 390 400 410 420
460 470 480 490 500
pF1KB4 AMNRHIK-ASTKVE-VDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNGIIK
:. ... . . : .: : .:: :: :: .: .. :. . . . . :
CCDS65 AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGG
430 440 450 460 470 480
510 520 530 540 550 560
pF1KB4 WGDPVTRVLDDGELLVQQTKNSDR------TPLVSVLLEGPPHSGKTALAAKIAEESNFP
: : : :. ::. ... :. :: .::. ::: ::: :: ::.: .
CCDS65 LED-VKRELQ--ELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN
490 500 510 520 530
570 580 590 600 610
pF1KB4 FIKICSPDKM-IGFSETAKCQAMKKIFDDAYKSQLSCVVV-DDIERLLDY----VPIGPR
::.: .:. . . :.:. ...::: : .. ::. :... . . :
CCDS65 FISIKGPELLTMWFGESEA--NVREIFDKARQAA-PCVLFFDELDSIAKARGGNIGDGGG
540 550 560 570 580 590
620 630 640 650 660 670
pF1KB4 FSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLL
.. :.. .:. . . ....:::.:.: :..
CCDS65 AADRVINQILTEMDGMSTK-KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRV
600 610 620 630 640 650
680 690 700 710 720 730
pF1KB4 EALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG
CCDS65 AILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQ
660 670 680 690 700 710
>>CCDS56043.1 PSMC5 gene_id:5705|Hs108|chr17 (398 aa)
initn: 403 init1: 206 opt: 472 Z-score: 551.3 bits: 111.8 E(32554): 2.2e-24
Smith-Waterman score: 524; 33.2% identity (65.1% similar) in 364 aa overlap (116-474:49-384)
90 100 110 120 130 140
pF1KB4 DKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNEKLF
.. : .: ...:. ::. .: ....:
CCDS56 KIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGE-VVRAMDKK--
20 30 40 50 60 70
150 160 170 180 190 200
pF1KB4 GLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKENR
.::: . : .:. .. ..:... :. : .::. . .. .:. : :.
CCDS56 KVLVK----VHP---EGKFVVDVDKNIDINDVTPNCRVAL-RNDSYTLHKILPNKVDPLV
80 90 100 110 120
210 220 230 240 250 260
pF1KB4 QSIIN---PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPP
. .. :: ..: ::::::....: .... : ::. : .: . ::.::::::
CCDS56 SLMMVEKVPDSTYEM--IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPP
130 140 150 160 170 180
270 280 290 300 310 320
pF1KB4 GCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGL
: ::::::: ... . .: .: :...:..::. .:.::. :.:. : :
CCDS56 GTGKTLLARAVAHHTDCTFIRV-SGSELVQKFIGEGARMVRELFVMAREH-----APS--
190 200 210 220 230
330 340 350 360 370 380
pF1KB4 HIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLID
::..::::.: ..: :. .:.. :. :.. .::...:: : .:: :: ::: :..:
CCDS56 -IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILD
240 250 260 270 280 290
390 400 410 420 430 440
pF1KB4 EALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAE
:::::::.. :.:. :.:..::.::.::. .: :. ......: . ::::
CCDS56 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAE
300 310 320 330 340 350
450 460 470 480 490 500
pF1KB4 LEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYA
..:. : :. .. :. . .: :. .:
CCDS56 VKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
360 370 380 390
510 520 530 540 550 560
pF1KB4 SYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES
>>CCDS11645.1 PSMC5 gene_id:5705|Hs108|chr17 (406 aa)
initn: 403 init1: 206 opt: 472 Z-score: 551.2 bits: 111.8 E(32554): 2.2e-24
Smith-Waterman score: 524; 33.2% identity (65.1% similar) in 364 aa overlap (116-474:57-392)
90 100 110 120 130 140
pF1KB4 DKAKQCIGTMTIEIDFLQKKSIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNEKLF
.. : .: ...:. ::. .: ....:
CCDS11 KIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGE-VVRAMDKK--
30 40 50 60 70 80
150 160 170 180 190 200
pF1KB4 GLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKENR
.::: . : .:. .. ..:... :. : .::. . .. .:. : :.
CCDS11 KVLVK----VHP---EGKFVVDVDKNIDINDVTPNCRVAL-RNDSYTLHKILPNKVDPLV
90 100 110 120 130
210 220 230 240 250 260
pF1KB4 QSIIN---PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPP
. .. :: ..: ::::::....: .... : ::. : .: . ::.::::::
CCDS11 SLMMVEKVPDSTYEM--IGGLDKQIKEI-KEVIELPVKHPELFEALGIAQPKGVLLYGPP
140 150 160 170 180 190
270 280 290 300 310 320
pF1KB4 GCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGL
: ::::::: ... . .: .: :...:..::. .:.::. :.:. : :
CCDS11 GTGKTLLARAVAHHTDCTFIRV-SGSELVQKFIGEGARMVRELFVMAREH-----APS--
200 210 220 230 240
330 340 350 360 370 380
pF1KB4 HIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLID
::..::::.: ..: :. .:.. :. :.. .::...:: : .:: :: ::: :..:
CCDS11 -IIFMDEIDSIGSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILD
250 260 270 280 290 300
390 400 410 420 430 440
pF1KB4 EALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAE
:::::::.. :.:. :.:..::.::.::. .: :. ......: . ::::
CCDS11 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMN----LTRGINLRKIAELMPGASGAE
310 320 330 340 350
450 460 470 480 490 500
pF1KB4 LEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQEDYA
..:. : :. .. :. . .: :. .:
CCDS11 VKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
360 370 380 390 400
510 520 530 540 550 560
pF1KB4 SYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES
>>CCDS81837.1 PSMC1 gene_id:5700|Hs108|chr14 (367 aa)
initn: 433 init1: 199 opt: 463 Z-score: 541.3 bits: 109.8 E(32554): 7.8e-24
Smith-Waterman score: 487; 36.9% identity (69.4% similar) in 255 aa overlap (220-471:114-350)
190 200 210 220 230 240
pF1KB4 NSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMG
:::::.....: ... . :: :.::
CCDS81 HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEI-KESVELPLTHPEYYEEMG
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB4 CKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADA
: ::..:::::: ::::::. .... .: .:: : :...::.:.. .:.:: :
CCDS81 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKLVRELFRVA
150 160 170 180 190 200
310 320 330 340 350 360
pF1KB4 EEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNI
::. : : :...:::::: .: .. .: .. :.. .::...:: .. ...
CCDS81 EEH-----APS---IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDV
210 220 230 240 250
370 380 390 400 410 420
pF1KB4 LVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIK
:: ::: . .: ::.::::.. :.:. ::::: . .:..:::.:: :. :: .
CCDS81 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT----LADDVTLD
260 270 280 290 300
430 440 450 460 470 480
pF1KB4 ELAVETKNFSGAELEGLVRAAQSTAM-NRHIKASTKVEVDMEKAESLQVTRGDFLASLEN
.: . ..:::..... : :. .:..:.... :..:..
CCDS81 DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE---DFKKSKENVLYKKQEGTPEGL
310 320 330 340 350 360
490 500 510 520 530 540
pF1KB4 DIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPH
CCDS81 YL
>>CCDS32139.1 PSMC1 gene_id:5700|Hs108|chr14 (440 aa)
initn: 433 init1: 199 opt: 463 Z-score: 540.1 bits: 109.8 E(32554): 9.1e-24
Smith-Waterman score: 487; 36.9% identity (69.4% similar) in 255 aa overlap (220-471:187-423)
190 200 210 220 230 240
pF1KB4 NSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMG
:::::.....: ... . :: :.::
CCDS32 HAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEI-KESVELPLTHPEYYEEMG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB4 CKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADA
: ::..:::::: ::::::. .... .: .:: : :...::.:.. .:.:: :
CCDS32 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV-GSELIQKYLGDGPKLVRELFRVA
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB4 EEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNI
::. : : :...:::::: .: .. .: .. :.. .::...:: .. ...
CCDS32 EEH-----APS---IVFIDEIDAIGTKRYDSNSGGEREIQRTML-ELLNQLDGFDSRGDV
280 290 300 310 320
370 380 390 400 410 420
pF1KB4 LVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIK
:: ::: . .: ::.::::.. :.:. ::::: . .:..:::.:: :. :: .
CCDS32 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT----LADDVTLD
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB4 ELAVETKNFSGAELEGLVRAAQSTAM-NRHIKASTKVEVDMEKAESLQVTRGDFLASLEN
.: . ..:::..... : :. .:..:.... :..:..
CCDS32 DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE---DFKKSKENVLYKKQEGTPEGL
390 400 410 420 430
490 500 510 520 530 540
pF1KB4 DIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPH
CCDS32 YL
440
>>CCDS9710.2 PSMC6 gene_id:5706|Hs108|chr14 (403 aa)
initn: 427 init1: 215 opt: 450 Z-score: 525.6 bits: 107.0 E(32554): 5.9e-23
Smith-Waterman score: 467; 37.1% identity (67.8% similar) in 264 aa overlap (220-472:149-396)
190 200 210 220 230 240
pF1KB4 NSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMG
::::.... .. :... . ::. ...:
CCDS97 LTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIREL-REVIELPLTNPELFQRVG
120 130 140 150 160 170
250 260 270 280 290 300
pF1KB4 CKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADA
:: ::::::: ::::::: ....:. :::.. :..::.::: ::..: :
CCDS97 IIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSS-IVDKYIGESARLIREMFNYA
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB4 EEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG--VHDTVVNQLLSKIDGVEQLNNI
...: ::..:::::: .: : . :. .. :.. .::...:: . :. .
CCDS97 RDHQP--------CIIFMDEIDAIGGRRFSEGTSADREIQRTLM-ELLNQMDGFDTLHRV
240 250 260 270 280
370 380 390 400 410 420
pF1KB4 LVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIK
.: ::::: .: ::::::::. :..: ::.:..::.::.::.. . : ...: .
CCDS97 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKH----GEIDYE
290 300 310 320 330 340
430 440 450 460 470
pF1KB4 ELAVETKNFSGAELEGL--------VRAAQSTAMNRH-IKASTKVEVDMEKAESLQVTRG
.. . .:.::.:... .:: .. .... .:: :: .: .: ::
CCDS97 AIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV-ADSKKLESKLDYKP
350 360 370 380 390 400
480 490 500 510 520 530
pF1KB4 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS
CCDS97 V
>>CCDS11859.1 AFG3L2 gene_id:10939|Hs108|chr18 (797 aa)
initn: 252 init1: 252 opt: 442 Z-score: 511.8 bits: 105.5 E(32554): 3.5e-22
Smith-Waterman score: 444; 26.7% identity (55.2% similar) in 513 aa overlap (203-700:293-762)
180 190 200 210 220 230
pF1KB4 EVGLVVGNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFR
:. .... . . . ..: .. .:..
CCDS11 IIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIME
270 280 290 300 310 320
240 250 260 270 280 290
pF1KB4 RAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV-VNGPEIL
:.. . :. ...: : :: .: :::: ::::::. . :. : . :.: :.:
CCDS11 --FVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANV--PFITVSGSEFL
330 340 350 360 370
300 310 320 330 340 350
pF1KB4 NKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMA-GSTGVHDTV
. .:: . : .: ::: : : .: :...:::::. ..:: :. . ....
CCDS11 EMFVGVGPARVRDLFALA-----RKNAPC---ILFIDEIDAVGRKRGRGNFGGQSEQENT
380 390 400 410 420 430
360 370 380 390 400 410
pF1KB4 VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH
.:::: ..:: . .:..... :::::..: :::::::.. .. :: :: ::: .:...:
CCDS11 LNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVH
440 450 460 470 480 490
420 430 440 450 460 470
pF1KB4 TARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKA
.. . : : ..:: : .::::.. .. : : ::.. : . . .:.:
CCDS11 LRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAA-RHLSDSIN-QKHFEQA
500 510 520 530 540
480 490 500 510 520
pF1KB4 ESLQVTRGDFLASLENDIKPAFGTNQEDYASYIMNG--IIKW----GDPVTRV--LDDGE
. : ...::. . .. ... ..: : . : .::. .: . :.
CCDS11 ----IER--VIGGLEKKTQ-VLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK
550 560 570 580 590 600
530 540 550 560 570 580
pF1KB4 LL--VQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETA
: .: . . ::. .:.....:: : : . : . ...:
CCDS11 GLGYAQYLPKEQYLYTKEQLLD----RMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSA
610 620 630 640 650
590 600 610 620 630
pF1KB4 KCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV---PIGPRFSNLVLQALLVLLKKAPPQG
: .. ... .:.: :. : :.: : . . :. . . .:.. : .
CCDS11 YAQIVQFGMNEKV-GQISF----DLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRT
660 670 680 690 700 710
640 650 660 670 680 690
pF1KB4 RKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQ
:: : .. :: . .: . . : . .:::: :..: .
CCDS11 VALL---TEKKADVEKVALLL--LEKEVLDKN--------DMVELLGPRPFAEKSTYEEF
720 730 740 750
700 710 720 730 740
pF1KB4 VKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEGASPLDFD
:.:
CCDS11 VEGTGSLDEDTSLPEGLKDWNKEREKEKEEPPGEKVAN
760 770 780 790
>>CCDS5731.1 PSMC2 gene_id:5701|Hs108|chr7 (433 aa)
initn: 421 init1: 209 opt: 437 Z-score: 510.0 bits: 104.2 E(32554): 4.4e-22
Smith-Waterman score: 446; 34.2% identity (62.9% similar) in 275 aa overlap (211-483:170-426)
190 200 210 220 230 240
pF1KB4 SQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVF
:: .. .:: :: . .:.. . ..
CCDS57 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYS--DVGGC-KEQIEKLREVVETPLL
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB4 PPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEA
:: ..: . ::.::.:::: :::: :: ... .: .:. : :...:::::.
CCDS57 HPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI-GSELVQKYVGEGAR
200 210 220 230 240 250
310 320 330 340 350
pF1KB4 NIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKI
.:.:: :. .. : :.::::::: : . .:.. :. :.. .:....
CCDS57 MVRELFEMARTKKACL--------IFFDEIDAIGGARFDDGAGGDNEVQRTML-ELINQL
260 270 280 290 300
360 370 380 390 400 410
pF1KB4 DGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQ
:: . .:: :. ::::: .: ::.:::::. :.:..::: .:: .:..::. :
CCDS57 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS---
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB4 LLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKVEVDMEKAESLQVTRG
. :. .. :: : .:::.... : :. . : .:. . .: .... . .
CCDS57 -VERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF-LEAVNKVIKSYA
370 380 390 400 410 420
480 490 500 510 520 530
pF1KB4 DFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVS
: :.
CCDS57 KFSATPRYMTYN
430
>>CCDS46076.1 PSMC4 gene_id:5704|Hs108|chr19 (387 aa)
initn: 364 init1: 170 opt: 433 Z-score: 506.1 bits: 103.4 E(32554): 7.2e-22
Smith-Waterman score: 462; 31.3% identity (62.9% similar) in 313 aa overlap (172-479:88-380)
150 160 170 180 190 200
pF1KB4 EKLFGLLVKDIEAMDPSILKGEPATGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKT
:. :. :..::..: :. ....
CCDS46 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVL--PPE
60 70 80 90 100 110
210 220 230 240 250
pF1KB4 KENRQSIINPDWNFEKM--GIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLY
.. ... : . . : :::.: . ... :.: . :. .:.: .:.:.:
CCDS46 ADSSIMMLTSDQKPDVMYADIGGMDIQKQEV-REAVELPLTHFELYKQIGIDPPRGVLMY
120 130 140 150 160 170
260 270 280 290 300 310
pF1KB4 GPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGAN
::::::::.::. ... .: .:: : :...::.::. .: .: ::. .
CCDS46 GPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVF--------RLAKE
180 190 200 210 220
320 330 340 350 360 370
pF1KB4 SGLHIIIFDEIDAICKQR-GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDL
.. ::..:::::: .: ...:. . .. .::...:: .: :. :: ::: :
CCDS46 NAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADT
230 240 250 260 270 280
380 390 400 410 420 430
pF1KB4 IDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSG
.: ::::::::. :.:. :::.. . :. :..: :: .::... ... ..::
CCDS46 LDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMN----LSEEVDLEDYVARPDKISG
290 300 310 320 330 340
440 450 460 470 480 490
pF1KB4 AELEGLVRAAQSTAM--NRHIKASTKVEVDMEKAESLQVTRGDFLASLENDIKPAFGTNQ
:..... . . :. ::.: . :.::: . . . .
CCDS46 ADINSICQESGMLAVRENRYIVLAK----DFEKAYKTVIKKDEQEHEFYK
350 360 370 380
500 510 520 530 540 550
pF1KB4 EDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKI
744 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:06:32 2016 done: Thu Nov 3 22:06:33 2016
Total Scan time: 3.880 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]