Result of FASTA (omim) for
pF1KB4886
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4886, 340 aa
1>>>pF1KB4886 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9127+/-0.000512; mu= 13.6673+/- 0.031
mean_var=151.9683+/-32.272, 0's: 0 Z-trim(112.2): 479 B-trim: 51 in 1/50
Lambda= 0.104039
statistics sampled from 20403 (21028) to 20403 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.247), width: 16
Scan time: 5.710
The best scores are: opt bits E(85289)
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 2330 362.2 9.3e-100
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 2155 335.9 7.5e-92
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2155 335.9 7.5e-92
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2155 335.9 7.5e-92
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2155 335.9 7.5e-92
NP_001269468 (OMIM: 139380,613065,616973) guanine ( 340) 2155 335.9 7.5e-92
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 2151 335.3 1.1e-91
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2151 335.3 1.1e-91
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2151 335.3 1.1e-91
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 1970 308.1 1.7e-83
NP_001284500 (OMIM: 139130,145500,617024) guanine ( 339) 1945 304.4 2.3e-82
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 1746 274.5 2.4e-73
NP_001269467 (OMIM: 139380,613065,616973) guanine ( 240) 1536 242.8 5.6e-64
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1250 200.1 6e-51
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1250 200.2 6.4e-51
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1200 192.6 1.1e-48
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1183 189.9 5.8e-48
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212) 817 134.8 1.6e-31
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521) 418 75.4 3e-13
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522) 418 75.4 3e-13
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 397 72.0 2e-12
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 397 72.0 2e-12
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 397 72.0 2e-12
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 386 70.3 5.7e-12
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 386 70.3 5.7e-12
NP_008882 (OMIM: 601787) transcription initiation ( 800) 373 68.9 4.2e-11
NP_001290177 (OMIM: 609540) WD repeat-containing p ( 212) 337 62.8 7.8e-10
XP_011520396 (OMIM: 609540) PREDICTED: WD repeat-c ( 305) 337 63.0 9.8e-10
NP_079510 (OMIM: 609540) WD repeat-containing prot ( 305) 337 63.0 9.8e-10
NP_001290176 (OMIM: 609540) WD repeat-containing p ( 305) 337 63.0 9.8e-10
NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 336 62.9 1.2e-09
NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 336 63.0 1.3e-09
XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321) 334 62.5 1.4e-09
NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369) 334 62.6 1.5e-09
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 329 61.9 2.5e-09
XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 323 60.9 4.2e-09
XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 323 60.9 4.4e-09
XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 323 61.0 4.8e-09
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 322 61.1 7.5e-09
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 322 61.1 7.5e-09
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 322 61.1 7.5e-09
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 322 61.1 7.5e-09
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 322 61.2 7.6e-09
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 322 61.2 7.6e-09
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 322 61.2 7.6e-09
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 322 61.2 7.6e-09
XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675) 322 61.2 7.6e-09
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 322 61.2 7.6e-09
XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675) 322 61.2 7.6e-09
XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 313 59.4 1.2e-08
>>NP_005264 (OMIM: 139390) guanine nucleotide-binding pr (340 aa)
initn: 2330 init1: 2330 opt: 2330 Z-score: 1911.9 bits: 362.2 E(85289): 9.3e-100
Smith-Waterman score: 2330; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::::::
NP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1770.0 bits: 335.9 E(85289): 7.5e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
NP_002 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
NP_002 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
NP_002 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
NP_002 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
NP_002 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
NP_002 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1770.0 bits: 335.9 E(85289): 7.5e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1770.0 bits: 335.9 E(85289): 7.5e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1770.0 bits: 335.9 E(85289): 7.5e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_001269468 (OMIM: 139380,613065,616973) guanine nucl (340 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 1770.0 bits: 335.9 E(85289): 7.5e-92
Smith-Waterman score: 2155; 90.3% identity (97.1% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::.:::::::::.::::::::::.:.::.::: ..:::::::::::::::::::::::
NP_001 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
NP_001 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::: :::::::::::::::::.:::::::::::::::::::. :
NP_001 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.::::::::::: : ::::::::: ::::::..:::::: ::::::::. ::::: :
NP_001 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.:::::::::::::::::::. :::::::::::::.::.:::::::::::::::.:::.
NP_001 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:.::::::::::::::::::::::::::::::::::::::
NP_001 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
310 320 330 340
>>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin (340 aa)
initn: 2151 init1: 2151 opt: 2151 Z-score: 1766.7 bits: 335.3 E(85289): 1.1e-91
Smith-Waterman score: 2151; 90.0% identity (97.9% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::.::::::.:.::.:::...: :::::::::::::::::::::
NP_067 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::.:::::::::
NP_067 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::::::::::::::::::.::.:::::::::::::::.:::. :
NP_067 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.:::::::::::.:: ::::::::::: ::::.::.::::.: :: ::::::.:::::::
NP_067 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.::::::::::::::::::::.::::::::::::::::.:::::::::::::::.::..
NP_067 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::.:::
NP_067 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2151 init1: 2151 opt: 2151 Z-score: 1766.7 bits: 335.3 E(85289): 1.1e-91
Smith-Waterman score: 2151; 90.0% identity (97.9% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::.::::::.:.::.:::...: :::::::::::::::::::::
XP_006 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::.:::::::::
XP_006 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::::::::::::::::::.::.:::::::::::::::.:::. :
XP_006 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.:::::::::::.:: ::::::::::: ::::.::.::::.: :: ::::::.:::::::
XP_006 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.::::::::::::::::::::.::::::::::::::::.:::::::::::::::.::..
XP_006 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::.:::
XP_006 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine (340 aa)
initn: 2151 init1: 2151 opt: 2151 Z-score: 1766.7 bits: 335.3 E(85289): 1.1e-91
Smith-Waterman score: 2151; 90.0% identity (97.9% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
::::::::::::::::::.::::::.:.::.:::...: :::::::::::::::::::::
XP_005 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
:::: ::::::::::::::::::::::::.::::::::::::::::::::.:::::::::
XP_005 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.:::::::::::::::::::::::::::::.::.:::::::::::::::.:::. :
XP_005 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.:::::::::::.:: ::::::::::: ::::.::.::::.: :: ::::::.:::::::
XP_005 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
:.::::::::::::::::::::.::::::::::::::::.:::::::::::::::.::..
XP_005 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
::::::::::::::::::::::::::::::::::::.:::
XP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
310 320 330 340
>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot (340 aa)
initn: 1970 init1: 1970 opt: 1970 Z-score: 1619.9 bits: 308.1 E(85289): 1.7e-83
Smith-Waterman score: 1970; 80.9% identity (94.4% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB4 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
:.:.::::::::::..:: ::::::.: ::.....::. :::.:::::::::::::::::
NP_002 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
:::.:::.::::::::::::.::::::::::::::::::::::::::::::::::::::.
NP_002 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
::::.::.:::::.::::: .::::::::::::::.:.:::::::::::::::::: . :
NP_002 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
.::.:: :::...:: :.::::::: ::::::.. ::::: ::::::::. ::::: :
NP_002 VGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
. ::::::.::::::::::::. .::..::::::::::: :::::.:::::::::.::.:
NP_002 ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM
250 260 270 280 290 300
310 320 330 340
pF1KB4 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
:..:.:.:.:::::::::::: ::::::::::::::::::
NP_002 KSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
310 320 330 340
340 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:04:07 2016 done: Sat Nov 5 06:04:08 2016
Total Scan time: 5.710 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]