Result of FASTA (omim) for
pF1KB4800
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4800, 422 aa
1>>>pF1KB4800 422 - 422 aa - 422 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0019+/-0.000405; mu= 2.7478+/- 0.025
mean_var=324.7415+/-66.431, 0's: 0 Z-trim(122.2): 1872 B-trim: 162 in 1/56
Lambda= 0.071171
statistics sampled from 37814 (39939) to 37814 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.468), width: 16
Scan time: 10.710
The best scores are: opt bits E(85289)
XP_011539548 (OMIM: 600871,607847,613107) PREDICTE ( 422) 2974 318.9 1.6e-86
NP_001120688 (OMIM: 600871,607847,613107) zinc fin ( 422) 2974 318.9 1.6e-86
NP_005254 (OMIM: 600871,607847,613107) zinc finger ( 422) 2974 318.9 1.6e-86
XP_005270806 (OMIM: 600871,607847,613107) PREDICTE ( 422) 2974 318.9 1.6e-86
NP_001120687 (OMIM: 600871,607847,613107) zinc fin ( 422) 2974 318.9 1.6e-86
XP_011539547 (OMIM: 600871,607847,613107) PREDICTE ( 422) 2974 318.9 1.6e-86
XP_011517372 (OMIM: 187900,604383) PREDICTED: zinc ( 330) 1126 129.0 1.8e-29
NP_004179 (OMIM: 187900,604383) zinc finger protei ( 330) 1126 129.0 1.8e-29
XP_011517370 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 787 94.2 5.5e-19
XP_011517371 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 787 94.2 5.5e-19
XP_006717360 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 787 94.2 5.5e-19
XP_016870664 (OMIM: 187900,604383) PREDICTED: zinc ( 352) 787 94.2 5.5e-19
XP_016870665 (OMIM: 187900,604383) PREDICTED: zinc ( 284) 773 92.7 1.3e-18
NP_001128503 (OMIM: 187900,604383) zinc finger pro ( 284) 773 92.7 1.3e-18
XP_005255615 (OMIM: 603436) PREDICTED: zinc finger ( 554) 636 78.9 3.4e-14
NP_001265087 (OMIM: 603436) zinc finger protein 20 ( 554) 636 78.9 3.4e-14
NP_001035893 (OMIM: 603436) zinc finger protein 20 ( 554) 636 78.9 3.4e-14
NP_003447 (OMIM: 603436) zinc finger protein 205 [ ( 554) 636 78.9 3.4e-14
NP_060478 (OMIM: 607414) fez family zinc finger pr ( 459) 617 76.9 1.2e-13
XP_016882723 (OMIM: 603899) PREDICTED: zinc finger ( 518) 617 77.0 1.3e-13
NP_001243102 (OMIM: 603899) zinc finger protein 85 ( 531) 617 77.0 1.3e-13
XP_011526566 (OMIM: 603899) PREDICTED: zinc finger ( 536) 617 77.0 1.3e-13
NP_003420 (OMIM: 603899) zinc finger protein 85 is ( 595) 617 77.0 1.4e-13
NP_001243100 (OMIM: 603899) zinc finger protein 85 ( 625) 617 77.1 1.4e-13
XP_011526565 (OMIM: 603899) PREDICTED: zinc finger ( 640) 617 77.1 1.5e-13
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391) 607 75.8 2.2e-13
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391) 607 75.8 2.2e-13
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391) 607 75.8 2.2e-13
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391) 607 75.8 2.2e-13
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 607 76.0 2.8e-13
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 607 76.0 2.8e-13
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 607 76.0 2.8e-13
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 607 76.0 2.8e-13
NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542) 606 75.9 2.9e-13
NP_001153736 (OMIM: 613301,616030) fez family zinc ( 425) 603 75.4 3e-13
XP_011514504 (OMIM: 613301,616030) PREDICTED: fez ( 425) 603 75.4 3e-13
NP_001265592 (OMIM: 604768) zinc finger protein 25 ( 574) 605 75.8 3.2e-13
XP_011526750 (OMIM: 604768) PREDICTED: zinc finger ( 574) 605 75.8 3.2e-13
NP_001265607 (OMIM: 604768) zinc finger protein 25 ( 574) 605 75.8 3.2e-13
XP_016883008 (OMIM: 604768) PREDICTED: zinc finger ( 586) 605 75.8 3.2e-13
NP_001265593 (OMIM: 604768) zinc finger protein 25 ( 586) 605 75.8 3.2e-13
XP_016883007 (OMIM: 604768) PREDICTED: zinc finger ( 586) 605 75.8 3.2e-13
XP_005250394 (OMIM: 613301,616030) PREDICTED: fez ( 475) 603 75.5 3.3e-13
NP_001019784 (OMIM: 613301,616030) fez family zinc ( 475) 603 75.5 3.3e-13
XP_016883006 (OMIM: 604768) PREDICTED: zinc finger ( 607) 605 75.8 3.3e-13
XP_011526746 (OMIM: 604768) PREDICTED: zinc finger ( 618) 605 75.8 3.3e-13
XP_016883005 (OMIM: 604768) PREDICTED: zinc finger ( 618) 605 75.8 3.3e-13
XP_016883004 (OMIM: 604768) PREDICTED: zinc finger ( 618) 605 75.8 3.3e-13
NP_001265606 (OMIM: 604768) zinc finger protein 25 ( 618) 605 75.8 3.3e-13
NP_001265590 (OMIM: 604768) zinc finger protein 25 ( 618) 605 75.8 3.3e-13
>>XP_011539548 (OMIM: 600871,607847,613107) PREDICTED: z (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
XP_011 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
XP_011 LK
>>NP_001120688 (OMIM: 600871,607847,613107) zinc finger (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
NP_001 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
NP_001 LK
>>NP_005254 (OMIM: 600871,607847,613107) zinc finger pro (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
NP_005 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
NP_005 LK
>>XP_005270806 (OMIM: 600871,607847,613107) PREDICTED: z (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
XP_005 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
XP_005 LK
>>NP_001120687 (OMIM: 600871,607847,613107) zinc finger (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
NP_001 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
NP_001 LK
>>XP_011539547 (OMIM: 600871,607847,613107) PREDICTED: z (422 aa)
initn: 2974 init1: 2974 opt: 2974 Z-score: 1674.5 bits: 318.9 E(85289): 1.6e-86
Smith-Waterman score: 2974; 99.5% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB4 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPNRADSTSNAGGAEAEPRDRLSPESQ
:::::::::::::::::::::::::::::::::::.:::::::::::.::::::::::::
XP_011 MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVPAPSRADSTSNAGGAKAEPRDRLSPESQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPFPLPFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAAGGAGAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKGAGVKVE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHAVSLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHG
370 380 390 400 410 420
pF1KB4 LK
::
XP_011 LK
>>XP_011517372 (OMIM: 187900,604383) PREDICTED: zinc fin (330 aa)
initn: 1241 init1: 1126 opt: 1126 Z-score: 650.3 bits: 129.0 E(85289): 1.8e-29
Smith-Waterman score: 1148; 50.0% identity (61.0% similar) in 428 aa overlap (1-422:1-330)
10 20 30 40 50
pF1KB4 MPRSFLVKSKKAHSYHQPR--SPGPDYSLRLENVP---APNRADSTSNAGGAEAEPRDRL
:::::::::::::.::::: : . : :: ::. . :. . :
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 SPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPF
. : .: . . : .: :: . :. . :: :... ::
XP_011 KREPELEQDQNLARMAPAP-EGPIVLSR---------PQDGDSP---------LSDSPPF
70 80 90 100
120 130 140 150 160 170
pF1KB4 PLPFKP-YSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAA
.:: .::. :: . : ::: . ..: : : : ..::: .
XP_011 ---YKPSFSWDTLA-TTYGH---SYRQAPSTMQSA----FLE------HSVSLYGSPLV-
110 120 130 140
180 190 200 210 220 230
pF1KB4 GGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKG
:.. :.: ::. : : :. :
XP_011 -------PSTE---------PAL----DFS-----LRYSP-------------GMDA---
150 160
240 250 260 270 280 290
pF1KB4 AGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFG
:.:.::.:::::::::::::::::::::::::..::::::
XP_011 --------------------YHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGKTFG
170 180 190 200
300 310 320 330 340 350
pF1KB4 HAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSD
:::::::: ::::::::.:..:::.:::::::::::::::::::::::.::::::::::
XP_011 HAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSD
210 220 230 240 250 260
360 370 380 390 400 410
pF1KB4 MKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRH
:::::.::::::::::::::::::::::::::::::::::::.:.:: ::::::::::::
XP_011 MKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRH
270 280 290 300 310 320
420
pF1KB4 RETQHGLK
::.::.::
XP_011 RESQHNLK
330
>>NP_004179 (OMIM: 187900,604383) zinc finger protein Gf (330 aa)
initn: 1241 init1: 1126 opt: 1126 Z-score: 650.3 bits: 129.0 E(85289): 1.8e-29
Smith-Waterman score: 1148; 50.0% identity (61.0% similar) in 428 aa overlap (1-422:1-330)
10 20 30 40 50
pF1KB4 MPRSFLVKSKKAHSYHQPR--SPGPDYSLRLENVP---APNRADSTSNAGGAEAEPRDRL
:::::::::::::.::::: : . : :: ::. . :. . :
NP_004 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 SPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPF
. : .: . . : .: :: . :. . :: :... ::
NP_004 KREPELEQDQNLARMAPAP-EGPIVLSR---------PQDGDSP---------LSDSPPF
70 80 90 100
120 130 140 150 160 170
pF1KB4 PLPFKP-YSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAA
.:: .::. :: . : ::: . ..: : : : ..::: .
NP_004 ---YKPSFSWDTLA-TTYGH---SYRQAPSTMQSA----FLE------HSVSLYGSPLV-
110 120 130 140
180 190 200 210 220 230
pF1KB4 GGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKG
:.. :.: ::. : : :. :
NP_004 -------PSTE---------PAL----DFS-----LRYSP-------------GMDA---
150 160
240 250 260 270 280 290
pF1KB4 AGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFG
:.:.::.:::::::::::::::::::::::::..::::::
NP_004 --------------------YHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGKTFG
170 180 190 200
300 310 320 330 340 350
pF1KB4 HAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSD
:::::::: ::::::::.:..:::.:::::::::::::::::::::::.::::::::::
NP_004 HAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSD
210 220 230 240 250 260
360 370 380 390 400 410
pF1KB4 MKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRH
:::::.::::::::::::::::::::::::::::::::::::.:.:: ::::::::::::
NP_004 MKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRH
270 280 290 300 310 320
420
pF1KB4 RETQHGLK
::.::.::
NP_004 RESQHNLK
330
>>XP_011517370 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 891 init1: 776 opt: 787 Z-score: 461.8 bits: 94.2 E(85289): 5.5e-19
Smith-Waterman score: 1094; 47.6% identity (58.0% similar) in 450 aa overlap (1-422:1-352)
10 20 30 40 50
pF1KB4 MPRSFLVKSKKAHSYHQPR--SPGPDYSLRLENVP---APNRADSTSNAGGAEAEPRDRL
:::::::::::::.::::: : . : :: ::. . :. . :
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 SPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPF
. : .: . . : .: :: . :. . :: :... ::
XP_011 KREPELEQDQNLARMAPAP-EGPIVLSR---------PQDGDSP---------LSDSPPF
70 80 90 100
120 130 140 150 160 170
pF1KB4 PLPFKP-YSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAA
.:: .::. :: . : ::: . ..: : : : ..::: .
XP_011 ---YKPSFSWDTLA-TTYGH---SYRQAPSTMQSA----FLE------HSVSLYGSPLV-
110 120 130 140
180 190 200 210 220 230
pF1KB4 GGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKG
:.. :.: ::. : : :. :
XP_011 -------PSTE---------PAL----DFS-----LRYSP-------------GMDA---
150 160
240 250 260 270 280 290
pF1KB4 AGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFG
:.:.::.:::::::::::::::::::::::::..::::::
XP_011 --------------------YHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGKTFG
170 180 190 200
300 310 320 330
pF1KB4 HAVSLEQHKAVHSQ----------------------ERSFDCKICGKSFKRSSTLSTHLL
:::::::: :::: ::::.:..:::.::::::::::::
XP_011 HAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQERSFECRMCGKAFKRSSTLSTHLL
210 220 230 240 250 260
340 350 360 370 380 390
pF1KB4 IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
:::::::::::.:::::::::::::::.::::::::::::::::::::::::::::::::
XP_011 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
270 280 290 300 310 320
400 410 420
pF1KB4 FKPFGCDLCGKGFQRKVDLRRHRETQHGLK
::::.:.:: ::::::::::::::.::.::
XP_011 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
330 340 350
>>XP_011517371 (OMIM: 187900,604383) PREDICTED: zinc fin (352 aa)
initn: 891 init1: 776 opt: 787 Z-score: 461.8 bits: 94.2 E(85289): 5.5e-19
Smith-Waterman score: 1094; 47.6% identity (58.0% similar) in 450 aa overlap (1-422:1-352)
10 20 30 40 50
pF1KB4 MPRSFLVKSKKAHSYHQPR--SPGPDYSLRLENVP---APNRADSTSNAGGAEAEPRDRL
:::::::::::::.::::: : . : :: ::. . :. . :
XP_011 MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 SPESQLTEAPDRASASPDSCEGSVCERSSEFEDFWRPPSPSASPASEKSMCPSLDEAQPF
. : .: . . : .: :: . :. . :: :... ::
XP_011 KREPELEQDQNLARMAPAP-EGPIVLSR---------PQDGDSP---------LSDSPPF
70 80 90 100
120 130 140 150 160 170
pF1KB4 PLPFKP-YSWSGLAGSDLRHLVQSYRPCGALERGAGLGLFCEPAPEPGHPAALYGPKRAA
.:: .::. :: . : ::: . ..: : : : ..::: .
XP_011 ---YKPSFSWDTLA-TTYGH---SYRQAPSTMQSA----FLE------HSVSLYGSPLV-
110 120 130 140
180 190 200 210 220 230
pF1KB4 GGAGAGAPGSCSAGAGATAGPGLGLYGDFGSAAAGLYERPTAAAGLLYPERGHGLHADKG
:.. :.: ::. : : :. :
XP_011 -------PSTE---------PAL----DFS-----LRYSP-------------GMDA---
150 160
240 250 260 270 280 290
pF1KB4 AGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFG
:.:.::.:::::::::::::::::::::::::..::::::
XP_011 --------------------YHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGKTFG
170 180 190 200
300 310 320 330
pF1KB4 HAVSLEQHKAVHSQ----------------------ERSFDCKICGKSFKRSSTLSTHLL
:::::::: :::: ::::.:..:::.::::::::::::
XP_011 HAVSLEQHTHVHSQGIPAGSSPEPAPDPPGPHFLRQERSFECRMCGKAFKRSSTLSTHLL
210 220 230 240 250 260
340 350 360 370 380 390
pF1KB4 IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
:::::::::::.:::::::::::::::.::::::::::::::::::::::::::::::::
XP_011 IHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG
270 280 290 300 310 320
400 410 420
pF1KB4 FKPFGCDLCGKGFQRKVDLRRHRETQHGLK
::::.:.:: ::::::::::::::.::.::
XP_011 FKPFSCELCTKGFQRKVDLRRHRESQHNLK
330 340 350
422 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:13:52 2016 done: Fri Nov 4 03:13:54 2016
Total Scan time: 10.710 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]