Result of FASTA (omim) for
pF1KB4619
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4619, 384 aa
1>>>pF1KB4619 384 - 384 aa - 384 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3438+/-0.000302; mu= 13.1655+/- 0.019
mean_var=106.8231+/-20.985, 0's: 0 Z-trim(120.1): 176 B-trim: 19 in 1/53
Lambda= 0.124091
statistics sampled from 34647 (34839) to 34647 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.408), width: 16
Scan time: 8.650
The best scores are: opt bits E(85289)
NP_722548 (OMIM: 120920,612922) membrane cofactor ( 384) 2725 498.0 1.5e-140
XP_011507865 (OMIM: 120920,612922) PREDICTED: memb ( 385) 2578 471.7 1.3e-132
NP_758861 (OMIM: 120920,612922) membrane cofactor ( 377) 2577 471.5 1.4e-132
XP_016856797 (OMIM: 120920,612922) PREDICTED: memb ( 378) 2430 445.2 1.2e-124
XP_016856798 (OMIM: 120920,612922) PREDICTED: memb ( 363) 2178 400.1 4.4e-111
XP_011507866 (OMIM: 120920,612922) PREDICTED: memb ( 370) 2178 400.1 4.4e-111
NP_002380 (OMIM: 120920,612922) membrane cofactor ( 392) 2140 393.3 5.2e-109
NP_758869 (OMIM: 120920,612922) membrane cofactor ( 399) 2140 393.3 5.2e-109
NP_758860 (OMIM: 120920,612922) membrane cofactor ( 349) 2103 386.6 4.6e-107
NP_758862 (OMIM: 120920,612922) membrane cofactor ( 362) 2103 386.7 4.8e-107
NP_758863 (OMIM: 120920,612922) membrane cofactor ( 369) 2103 386.7 4.9e-107
XP_016856799 (OMIM: 120920,612922) PREDICTED: memb ( 348) 2078 382.2 1e-105
NP_758871 (OMIM: 120920,612922) membrane cofactor ( 355) 2078 382.2 1e-105
XP_005273309 (OMIM: 120830) PREDICTED: C4b-binding ( 597) 638 124.5 6.4e-28
NP_000706 (OMIM: 120830) C4b-binding protein alpha ( 597) 638 124.5 6.4e-28
XP_005273308 (OMIM: 120830) PREDICTED: C4b-binding ( 597) 638 124.5 6.4e-28
NP_000564 (OMIM: 120620,607486,611162) complement (2039) 507 101.5 1.9e-20
XP_006711229 (OMIM: 120620,607486,611162) PREDICTE (2459) 507 101.5 2.2e-20
NP_000642 (OMIM: 120620,607486,611162) complement (2489) 507 101.5 2.2e-20
XP_011507507 (OMIM: 120620,607486,611162) PREDICTE (2554) 507 101.5 2.3e-20
NP_000565 (OMIM: 125240,613793) complement decay-a ( 381) 402 82.1 2.3e-15
NP_001287833 (OMIM: 125240,613793) complement deca ( 384) 402 82.1 2.3e-15
XP_016855956 (OMIM: 125240,613793) PREDICTED: comp ( 412) 402 82.2 2.5e-15
NP_001287832 (OMIM: 125240,613793) complement deca ( 439) 402 82.2 2.6e-15
NP_001108224 (OMIM: 125240,613793) complement deca ( 440) 402 82.2 2.6e-15
NP_001287831 (OMIM: 125240,613793) complement deca ( 444) 402 82.2 2.6e-15
NP_783641 (OMIM: 605886) complement component rece ( 569) 380 78.3 4.9e-14
XP_011533056 (OMIM: 608397) PREDICTED: CUB and sus (2238) 371 77.1 4.4e-13
XP_011533055 (OMIM: 608397) PREDICTED: CUB and sus (2595) 371 77.2 4.9e-13
XP_016869220 (OMIM: 608397) PREDICTED: CUB and sus (3327) 371 77.3 6e-13
NP_000441 (OMIM: 131210,145500) E-selectin precurs ( 610) 360 74.8 6.2e-13
XP_011533054 (OMIM: 608397) PREDICTED: CUB and sus (3549) 371 77.3 6.3e-13
NP_150094 (OMIM: 608397) CUB and sushi domain-cont (3564) 371 77.3 6.4e-13
XP_016855679 (OMIM: 608398) PREDICTED: CUB and sus (3362) 361 75.5 2.1e-12
XP_016855678 (OMIM: 608398) PREDICTED: CUB and sus (3506) 361 75.5 2.2e-12
XP_016855683 (OMIM: 608398) PREDICTED: CUB and sus (3566) 361 75.5 2.2e-12
XP_016855677 (OMIM: 608398) PREDICTED: CUB and sus (3567) 361 75.5 2.2e-12
XP_016855676 (OMIM: 608398) PREDICTED: CUB and sus (3606) 361 75.5 2.2e-12
XP_016855674 (OMIM: 608398) PREDICTED: CUB and sus (3607) 361 75.5 2.2e-12
XP_016855675 (OMIM: 608398) PREDICTED: CUB and sus (3607) 361 75.5 2.2e-12
NP_001268885 (OMIM: 608398) CUB and sushi domain-c (3631) 361 75.5 2.2e-12
NP_001868 (OMIM: 120650,240500,610927,614699) comp (1033) 347 72.6 4.7e-12
XP_005245497 (OMIM: 147050,173610) PREDICTED: P-se ( 768) 342 71.6 6.9e-12
XP_005245496 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 342 71.6 7.1e-12
XP_005245495 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 342 71.6 7.1e-12
XP_005245493 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 342 71.6 7.4e-12
NP_002996 (OMIM: 147050,173610) P-selectin precurs ( 830) 342 71.6 7.4e-12
XP_005245492 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 342 71.6 7.4e-12
XP_011507508 (OMIM: 120650,240500,610927,614699) P ( 969) 339 71.2 1.2e-11
NP_001006659 (OMIM: 120650,240500,610927,614699) c (1092) 339 71.2 1.3e-11
>>NP_722548 (OMIM: 120920,612922) membrane cofactor prot (384 aa)
initn: 2725 init1: 2725 opt: 2725 Z-score: 2644.3 bits: 498.0 E(85289): 1.5e-140
Smith-Waterman score: 2725; 100.0% identity (100.0% similar) in 384 aa overlap (1-384:1-384)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_722 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
310 320 330 340 350 360
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
::::::::::::::::::::::::
NP_722 GKADGGAEYATYQTKSTTPAEQRG
370 380
>>XP_011507865 (OMIM: 120920,612922) PREDICTED: membrane (385 aa)
initn: 2115 init1: 2115 opt: 2578 Z-score: 2502.0 bits: 471.7 E(85289): 1.3e-132
Smith-Waterman score: 2578; 95.3% identity (96.4% similar) in 385 aa overlap (1-384:1-385)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
:::::::::::::::::::::::::::::::::::::::::::::: :.:: :: : :
XP_011 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 -GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKK
. : : :.:. :::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSTSSTTKSPASSASGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKK
310 320 330 340 350 360
360 370 380
pF1KB4 KGKADGGAEYATYQTKSTTPAEQRG
:::::::::::::::::::::::::
XP_011 KGKADGGAEYATYQTKSTTPAEQRG
370 380
>>NP_758861 (OMIM: 120920,612922) membrane cofactor prot (377 aa)
initn: 2577 init1: 2577 opt: 2577 Z-score: 2501.2 bits: 471.5 E(85289): 1.4e-132
Smith-Waterman score: 2577; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
310 320 330 340 350 360
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
:
NP_758 GTYLTDETHREVKFTSL
370
>>XP_016856797 (OMIM: 120920,612922) PREDICTED: membrane (378 aa)
initn: 2115 init1: 2115 opt: 2430 Z-score: 2358.9 bits: 445.2 E(85289): 1.2e-124
Smith-Waterman score: 2430; 95.0% identity (96.1% similar) in 362 aa overlap (1-361:1-362)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
:::::::::::::::::::::::::::::::::::::::::::::: :.:: :: : :
XP_016 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHS
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 -GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKK
. : : :.:. :::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSTSSTTKSPASSASGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKK
310 320 330 340 350 360
360 370 380
pF1KB4 KGKADGGAEYATYQTKSTTPAEQRG
::
XP_016 KGTYLTDETHREVKFTSL
370
>>XP_016856798 (OMIM: 120920,612922) PREDICTED: membrane (363 aa)
initn: 2167 init1: 2167 opt: 2178 Z-score: 2115.4 bits: 400.1 E(85289): 4.4e-111
Smith-Waterman score: 2430; 96.1% identity (96.1% similar) in 361 aa overlap (1-361:1-347)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
: :::::::::::::::::::::::::::::::::::::::::::::
XP_016 G--------------YPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
310 320 330 340
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
:
XP_016 GTYLTDETHREVKFTSL
350 360
>>XP_011507866 (OMIM: 120920,612922) PREDICTED: membrane (370 aa)
initn: 2167 init1: 2167 opt: 2178 Z-score: 2115.2 bits: 400.1 E(85289): 4.4e-111
Smith-Waterman score: 2578; 96.4% identity (96.4% similar) in 384 aa overlap (1-384:1-370)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
: :::::::::::::::::::::::::::::::::::::::::::::
XP_011 G--------------YPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
310 320 330 340
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
::::::::::::::::::::::::
XP_011 GKADGGAEYATYQTKSTTPAEQRG
350 360 370
>>NP_002380 (OMIM: 120920,612922) membrane cofactor prot (392 aa)
initn: 2179 init1: 2115 opt: 2140 Z-score: 2078.1 bits: 393.3 E(85289): 5.2e-109
Smith-Waterman score: 2537; 96.0% identity (96.0% similar) in 376 aa overlap (1-361:1-376)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKV--------------
::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHS
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 -STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAV
310 320 330 340 350 360
350 360 370 380
pF1KB4 ICVVPYRYLQRRKKKGKADGGAEYATYQTKSTTPAEQRG
::::::::::::::::
NP_002 ICVVPYRYLQRRKKKGTYLTDETHREVKFTSL
370 380 390
>>NP_758869 (OMIM: 120920,612922) membrane cofactor prot (399 aa)
initn: 2179 init1: 2115 opt: 2140 Z-score: 2078.0 bits: 393.3 E(85289): 5.2e-109
Smith-Waterman score: 2685; 96.2% identity (96.2% similar) in 399 aa overlap (1-384:1-399)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKV--------------
::::::::::::::::::::::::::::::::::::::::::::::
NP_758 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHS
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 -STSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 VSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAV
310 320 330 340 350 360
350 360 370 380
pF1KB4 ICVVPYRYLQRRKKKGKADGGAEYATYQTKSTTPAEQRG
:::::::::::::::::::::::::::::::::::::::
NP_758 ICVVPYRYLQRRKKKGKADGGAEYATYQTKSTTPAEQRG
370 380 390
>>NP_758860 (OMIM: 120920,612922) membrane cofactor prot (349 aa)
initn: 2336 init1: 2078 opt: 2103 Z-score: 2043.0 bits: 386.6 E(85289): 4.6e-107
Smith-Waterman score: 2310; 95.6% identity (95.6% similar) in 339 aa overlap (1-339:1-324)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
:::::::::::::::::::::::::::::::::::::::::::::
NP_758 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLK---------------
250 260 270 280
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
:::::::::::::::::::::::::::::::::::::::
NP_758 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIGKQMVELNMPLTRLNQPLQQS
290 300 310 320 330 340
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
NP_758 REAE
>>NP_758862 (OMIM: 120920,612922) membrane cofactor prot (362 aa)
initn: 2482 init1: 2078 opt: 2103 Z-score: 2042.8 bits: 386.7 E(85289): 4.8e-107
Smith-Waterman score: 2456; 95.8% identity (95.8% similar) in 361 aa overlap (1-361:1-346)
10 20 30 40 50 60
pF1KB4 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MEPPGRRECPFPSWRFPGLLLAAMVLLLYSFSDACEEPPTFEAMELIGKPKPYYEIGERV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 DYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 YQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 FEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSAS
:::::::::::::::::::::::::::::::::::::::::::::
NP_758 GFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLK---------------
250 260 270 280
310 320 330 340 350 360
pF1KB4 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 GPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKK
290 300 310 320 330 340
370 380
pF1KB4 GKADGGAEYATYQTKSTTPAEQRG
:
NP_758 GTYLTDETHREVKFTSL
350 360
384 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:05:59 2016 done: Fri Nov 4 03:06:00 2016
Total Scan time: 8.650 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]