Result of FASTA (omim) for
pF1KB4054
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4054, 138 aa
1>>>pF1KB4054 138 - 138 aa - 138 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3554+/-0.00027; mu= 3.9632+/- 0.017
mean_var=134.9604+/-26.616, 0's: 0 Z-trim(123.7): 32 B-trim: 0 in 0/58
Lambda= 0.110400
statistics sampled from 43946 (43978) to 43946 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.831), E-opt: 0.2 (0.516), width: 16
Scan time: 5.360
The best scores are: opt bits E(85289)
NP_006529 (OMIM: 603827) bcl-2-like protein 11 iso ( 138) 965 163.3 1.1e-40
XP_005263610 (OMIM: 603827) PREDICTED: bcl-2-like ( 232) 965 163.4 1.7e-40
XP_005263618 (OMIM: 603827) PREDICTED: bcl-2-like ( 146) 757 130.2 1.1e-30
XP_005263609 (OMIM: 603827) PREDICTED: bcl-2-like ( 240) 757 130.3 1.7e-30
NP_619529 (OMIM: 603827) bcl-2-like protein 11 iso ( 109) 748 128.7 2.4e-30
NP_619527 (OMIM: 603827) bcl-2-like protein 11 iso ( 198) 678 117.7 8.7e-27
XP_005263608 (OMIM: 603827) PREDICTED: bcl-2-like ( 292) 678 117.8 1.2e-26
NP_001191042 (OMIM: 603827) bcl-2-like protein 11 ( 98) 519 92.2 2.1e-19
NP_001191041 (OMIM: 603827) bcl-2-like protein 11 ( 80) 509 90.5 5.3e-19
NP_001191040 (OMIM: 603827) bcl-2-like protein 11 ( 75) 508 90.3 5.6e-19
NP_996885 (OMIM: 603827) bcl-2-like protein 11 iso ( 112) 508 90.5 7.8e-19
XP_016858590 (OMIM: 603827) PREDICTED: bcl-2-like ( 169) 508 90.6 1.1e-18
XP_011508766 (OMIM: 603827) PREDICTED: bcl-2-like ( 206) 508 90.6 1.3e-18
XP_005263614 (OMIM: 603827) PREDICTED: bcl-2-like ( 206) 470 84.6 8.4e-17
XP_005263613 (OMIM: 603827) PREDICTED: bcl-2-like ( 206) 470 84.6 8.4e-17
XP_005263607 (OMIM: 603827) PREDICTED: bcl-2-like ( 300) 470 84.7 1.1e-16
NP_001191035 (OMIM: 603827) bcl-2-like protein 11 ( 108) 460 82.8 1.5e-16
NP_001191037 (OMIM: 603827) bcl-2-like protein 11 ( 172) 462 83.2 1.8e-16
NP_619528 (OMIM: 603827) bcl-2-like protein 11 iso ( 169) 461 83.1 1.9e-16
XP_005263616 (OMIM: 603827) PREDICTED: bcl-2-like ( 202) 460 83.0 2.5e-16
NP_619533 (OMIM: 603827) bcl-2-like protein 11 iso ( 45) 287 55.0 1.5e-08
NP_619532 (OMIM: 603827) bcl-2-like protein 11 iso ( 135) 293 56.3 1.8e-08
NP_619530 (OMIM: 603827) bcl-2-like protein 11 iso ( 135) 293 56.3 1.8e-08
NP_001191038 (OMIM: 603827) bcl-2-like protein 11 ( 140) 293 56.3 1.9e-08
NP_619531 (OMIM: 603827) bcl-2-like protein 11 iso ( 75) 287 55.1 2.2e-08
NP_996886 (OMIM: 603827) bcl-2-like protein 11 iso ( 79) 287 55.2 2.3e-08
NP_001191039 (OMIM: 603827) bcl-2-like protein 11 ( 82) 287 55.2 2.4e-08
NP_001191036 (OMIM: 603827) bcl-2-like protein 11 ( 85) 287 55.2 2.4e-08
XP_005263611 (OMIM: 603827) PREDICTED: bcl-2-like ( 229) 293 56.4 2.8e-08
XP_016858591 (OMIM: 603827) PREDICTED: bcl-2-like ( 116) 287 55.3 3.2e-08
XP_011508763 (OMIM: 603827) PREDICTED: bcl-2-like ( 266) 293 56.4 3.2e-08
XP_005263612 (OMIM: 603827) PREDICTED: bcl-2-like ( 210) 287 55.4 5.1e-08
>>NP_006529 (OMIM: 603827) bcl-2-like protein 11 isoform (138 aa)
initn: 965 init1: 965 opt: 965 Z-score: 851.2 bits: 163.3 E(85289): 1.1e-40
Smith-Waterman score: 965; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
70 80 90 100 110 120
130
pF1KB4 MVILRLLRYIVRLVWRMH
::::::::::::::::::
NP_006 MVILRLLRYIVRLVWRMH
130
>>XP_005263610 (OMIM: 603827) PREDICTED: bcl-2-like prot (232 aa)
initn: 965 init1: 965 opt: 965 Z-score: 847.9 bits: 163.4 E(85289): 1.7e-40
Smith-Waterman score: 965; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:95-232)
10 20 30
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRP
::::::::::::::::::::::::::::::
XP_005 RRRARAGRRGAWSLARTLRSEGKARTKKDQMAKQPSDVSSECDREGRQLQPAERPPQLRP
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB4 GAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQ
130 140 150 160 170 180
100 110 120 130
pF1KB4 ELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIVRLVWRMH
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIVRLVWRMH
190 200 210 220 230
>>XP_005263618 (OMIM: 603827) PREDICTED: bcl-2-like prot (146 aa)
initn: 790 init1: 755 opt: 757 Z-score: 671.8 bits: 130.2 E(85289): 1.1e-30
Smith-Waterman score: 757; 84.7% identity (89.3% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
:::::::::::::::::::::::::::::::::::::::::::::::.. . : :
XP_005 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVMMFSLPAFLLTPS
70 80 90 100 110 120
130
pF1KB4 MVILRLLRYIVRLVWRMH
: ... :
XP_005 PSTLYFFKKTVTSCNYMLILEMITVA
130 140
>>XP_005263609 (OMIM: 603827) PREDICTED: bcl-2-like prot (240 aa)
initn: 804 init1: 755 opt: 757 Z-score: 668.7 bits: 130.3 E(85289): 1.7e-30
Smith-Waterman score: 757; 84.7% identity (89.3% similar) in 131 aa overlap (1-131:95-225)
10 20 30
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRP
::::::::::::::::::::::::::::::
XP_005 RRRARAGRRGAWSLARTLRSEGKARTKKDQMAKQPSDVSSECDREGRQLQPAERPPQLRP
70 80 90 100 110 120
40 50 60 70 80 90
pF1KB4 GAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQ
130 140 150 160 170 180
100 110 120 130
pF1KB4 ELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIVRLVWRMH
:::::::::::::::::.. . : : : ... :
XP_005 ELRRIGDEFNAYYARRVMMFSLPAFLLTPSPSTLYFFKKTVTSCNYMLILEMITVA
190 200 210 220 230 240
>>NP_619529 (OMIM: 603827) bcl-2-like protein 11 isoform (109 aa)
initn: 783 init1: 748 opt: 748 Z-score: 665.9 bits: 128.7 E(85289): 2.4e-30
Smith-Waterman score: 748; 99.1% identity (100.0% similar) in 107 aa overlap (1-107:1-107)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
::::::::::::::::::::::::::::::::::::::::::::::.
NP_619 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRLEK
70 80 90 100
130
pF1KB4 MVILRLLRYIVRLVWRMH
>>NP_619527 (OMIM: 603827) bcl-2-like protein 11 isoform (198 aa)
initn: 951 init1: 678 opt: 678 Z-score: 601.9 bits: 117.7 E(85289): 8.7e-27
Smith-Waterman score: 678; 100.0% identity (100.0% similar) in 97 aa overlap (42-138:102-198)
20 30 40 50 60 70
pF1KB4 CDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAM
::::::::::::::::::::::::::::::
NP_619 PFATRSPLFIFMRRSSLLSRSSSGYFSFDTDRSPAPMSCDKSTQTPSPPCQAFNHYLSAM
80 90 100 110 120 130
80 90 100 110 120 130
pF1KB4 ASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 ASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIV
140 150 160 170 180 190
pF1KB4 RLVWRMH
:::::::
NP_619 RLVWRMH
>--
initn: 299 init1: 287 opt: 293 Z-score: 270.5 bits: 56.4 E(85289): 2.5e-08
Smith-Waterman score: 293; 71.6% identity (76.1% similar) in 67 aa overlap (1-60:1-67)
10 20 30 40 50
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPM-----SCDK-ST
::::::::::::::::::::::::::::::::::::::::: . :: . :
NP_619 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQGNPEGNHGGEGDSCPHGSP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 QTP-SPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQ
: : .::
NP_619 QGPLAPPASPGPFATRSPLFIFMRRSSLLSRSSSGYFSFDTDRSPAPMSCDKSTQTPSPP
70 80 90 100 110 120
>>XP_005263608 (OMIM: 603827) PREDICTED: bcl-2-like prot (292 aa)
initn: 951 init1: 678 opt: 678 Z-score: 599.4 bits: 117.8 E(85289): 1.2e-26
Smith-Waterman score: 678; 100.0% identity (100.0% similar) in 97 aa overlap (42-138:196-292)
20 30 40 50 60 70
pF1KB4 CDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAM
::::::::::::::::::::::::::::::
XP_005 PFATRSPLFIFMRRSSLLSRSSSGYFSFDTDRSPAPMSCDKSTQTPSPPCQAFNHYLSAM
170 180 190 200 210 220
80 90 100 110 120 130
pF1KB4 ASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIV
230 240 250 260 270 280
pF1KB4 RLVWRMH
:::::::
XP_005 RLVWRMH
290
>--
initn: 295 init1: 287 opt: 293 Z-score: 268.0 bits: 56.5 E(85289): 3.4e-08
Smith-Waterman score: 293; 71.6% identity (76.1% similar) in 67 aa overlap (1-60:95-161)
10 20 30
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRP
::::::::::::::::::::::::::::::
XP_005 RRRARAGRRGAWSLARTLRSEGKARTKKDQMAKQPSDVSSECDREGRQLQPAERPPQLRP
70 80 90 100 110 120
40 50 60 70 80
pF1KB4 GAPTSLQTEPQDRSPAPM-----SCDK-STQTP-SPPCQAFNHYLSAMASMRQAEPADMR
::::::::::: . :: . : : : .::
XP_005 GAPTSLQTEPQGNPEGNHGGEGDSCPHGSPQGPLAPPASPGPFATRSPLFIFMRRSSLLS
130 140 150 160 170 180
90 100 110 120 130
pF1KB4 PEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPRMVILRLLRYIVRLVWRMH
XP_005 RSSSGYFSFDTDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMASMRQAEPADMRPEIWIAQ
190 200 210 220 230 240
>>NP_001191042 (OMIM: 603827) bcl-2-like protein 11 isof (98 aa)
initn: 508 init1: 508 opt: 519 Z-score: 469.5 bits: 92.2 E(85289): 2.1e-19
Smith-Waterman score: 519; 80.2% identity (87.5% similar) in 96 aa overlap (1-90:1-96)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110
pF1KB4 CQAFNHYLSAM-----ASMRQAEPADMR-PEIWIAQELRRIGDEFNAYYARRVFLNNYQA
::::::::::: .:.: : ... : :.:.
NP_001 CQAFNHYLSAMDDSAGSSLRIALHREVQWPLKWLAKSS
70 80 90
120 130
pF1KB4 AEDHPRMVILRLLRYIVRLVWRMH
>>NP_001191041 (OMIM: 603827) bcl-2-like protein 11 isof (80 aa)
initn: 508 init1: 508 opt: 509 Z-score: 462.1 bits: 90.5 E(85289): 5.3e-19
Smith-Waterman score: 509; 93.6% identity (96.2% similar) in 78 aa overlap (1-78:1-76)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
::::::::::: .:. :
NP_001 CQAFNHYLSAM--VREIEEVVV
70 80
>>NP_001191040 (OMIM: 603827) bcl-2-like protein 11 isof (75 aa)
initn: 508 init1: 508 opt: 508 Z-score: 461.7 bits: 90.3 E(85289): 5.6e-19
Smith-Waterman score: 508; 100.0% identity (100.0% similar) in 71 aa overlap (1-71:1-71)
10 20 30 40 50 60
pF1KB4 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 CQAFNHYLSAMASMRQAEPADMRPEIWIAQELRRIGDEFNAYYARRVFLNNYQAAEDHPR
:::::::::::
NP_001 CQAFNHYLSAMGIFE
70
138 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:49:51 2016 done: Fri Nov 4 02:49:52 2016
Total Scan time: 5.360 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]