Result of FASTA (ccds) for
pF1KB4014
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4014, 469 aa
1>>>pF1KB4014 469 - 469 aa - 469 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2007+/-0.00115; mu= -7.8865+/- 0.068
mean_var=457.8477+/-101.144, 0's: 0 Z-trim(114.4): 649 B-trim: 818 in 1/53
Lambda= 0.059940
statistics sampled from 14224 (14995) to 14224 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.461), width: 16
Scan time: 3.810
The best scores are: opt bits E(32554)
CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8 ( 469) 3229 293.6 2.9e-79
CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8 ( 480) 3222 293.1 4.4e-79
CCDS54333.1 KLF11 gene_id:8462|Hs108|chr2 ( 495) 904 92.6 9.9e-19
CCDS1668.1 KLF11 gene_id:8462|Hs108|chr2 ( 512) 904 92.6 1e-18
>>CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8 (469 aa)
initn: 3229 init1: 3229 opt: 3229 Z-score: 1536.6 bits: 293.6 E(32554): 2.9e-79
Smith-Waterman score: 3229; 100.0% identity (100.0% similar) in 469 aa overlap (1-469:1-469)
10 20 30 40 50 60
pF1KB4 MEERMEMISERPKESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKKYVENRPVTPVSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MEERMEMISERPKESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKKYVENRPVTPVSDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SEEENLLPGTPDFHTIPAFCLTPPYSPSDFEPSQVSNLMAPAPSTVHFKSLSDTAKPHIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SEEENLLPGTPDFHTIPAFCLTPPYSPSDFEPSQVSNLMAPAPSTVHFKSLSDTAKPHIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 APFKEEEKSPVSAPKLPKAQATSVIRHTADAQLCNHQTCPMKAASILNYQNNSFRRRTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 APFKEEEKSPVSAPKLPKAQATSVIRHTADAQLCNHQTCPMKAASILNYQNNSFRRRTHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 NVEAARKNIPCAAVSPNRSKCERNTVADVDEKASAALYDFSVPSSETVICRSQPAPVSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NVEAARKNIPCAAVSPNRSKCERNTVADVDEKASAALYDFSVPSSETVICRSQPAPVSPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 QKSVLVSPPAVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKSVLVSPPAVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VPKGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VPKGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHIC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 SHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFAC
370 380 390 400 410 420
430 440 450 460
pF1KB4 PMCDRRFMRSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PMCDRRFMRSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
430 440 450 460
>>CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8 (480 aa)
initn: 3222 init1: 3222 opt: 3222 Z-score: 1533.2 bits: 293.1 E(32554): 4.4e-79
Smith-Waterman score: 3222; 100.0% identity (100.0% similar) in 468 aa overlap (2-469:13-480)
10 20 30 40
pF1KB4 MEERMEMISERPKESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKKYV
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MLNFGASLQQTAEERMEMISERPKESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKKYV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 ENRPVTPVSDLSEEENLLPGTPDFHTIPAFCLTPPYSPSDFEPSQVSNLMAPAPSTVHFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 ENRPVTPVSDLSEEENLLPGTPDFHTIPAFCLTPPYSPSDFEPSQVSNLMAPAPSTVHFK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB4 SLSDTAKPHIAAPFKEEEKSPVSAPKLPKAQATSVIRHTADAQLCNHQTCPMKAASILNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SLSDTAKPHIAAPFKEEEKSPVSAPKLPKAQATSVIRHTADAQLCNHQTCPMKAASILNY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB4 QNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCERNTVADVDEKASAALYDFSVPSSETVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 QNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCERNTVADVDEKASAALYDFSVPSSETVI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB4 CRSQPAPVSPQQKSVLVSPPAVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 CRSQPAPVSPQQKSVLVSPPAVSAGGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 VCPPVVFMGTQVPKGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPAPGFSPSAAKVTPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 VCPPVVFMGTQVPKGAVMFVVPQPVVQSSKPPVVSPNGTRLSPIAPAPGFSPSAAKVTPQ
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB4 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB4 RTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
430 440 450 460 470 480
>>CCDS54333.1 KLF11 gene_id:8462|Hs108|chr2 (495 aa)
initn: 942 init1: 740 opt: 904 Z-score: 449.7 bits: 92.6 E(32554): 9.9e-19
Smith-Waterman score: 1046; 40.3% identity (61.9% similar) in 494 aa overlap (6-465:5-484)
10 20 30 40 50
pF1KB4 MEERMEMISERPK-ESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKK--YVENRPVTPV
: : :: . .: : . :..:.::::::. :: :: . .: .. ::.:::
CCDS54 MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMS-SWGQRSQKGDLLRIRPLTPV
10 20 30 40 50
60 70 80 90 100
pF1KB4 SD---LSEEENLLPGTP----DFHTIPAFCLTPPYSPSDFEPSQ---VSNLMAPAPSTVH
:: .. .. .:: :::.. ..:.::: ::. ::: :: .. . . .
CCDS54 SDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTRTPVSPQVTDSKACTA
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB4 FKSLSDTAKPHIAAPFKEEEK----SPVSAPKLP-KAQATSVIRHTADAQLCNHQTCPMK
:...: : :. :: :. : .:..:::::::... :
CCDS54 TDVLQSSAVVARALSGGAERGLLGLEPV--PSSPCRAKGTSVIRHTGESPAACFPTIQTP
120 130 140 150 160 170
170 180 190 200 210
pF1KB4 AASILNYQNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCE----RNTVADVDEKASAALY
. . ... . :... .. . .: : .:. .. . .:.. : .
CCDS54 DCRLSDSREGEEQLLGHFET-LQDTHLTDSLLSTNLVSCQPCLHKSGGLLLTDKGQQAGW
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB4 DFSVPSSETVICRSQPAPVSPQQKSVLVSPPAVSAGGVPPMPVICQMVP-------LPA-
.: . : .: . .. . : .:.. :: ::.:::.: :::
CCDS54 PGAVQT-----C----SPKNYENDLPRKTTPLISVS-VPAPPVLCQMIPVTGQSSMLPAF
240 250 260 270 280
280 290 300 310 320
pF1KB4 -NNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQPVVQSSKP---PVVSPN
. : .: : : : ::.: ::.::::.:.:: .. : :.. .
CCDS54 LKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMAAG
290 300 310 320 330 340
330 340 350 360 370 380
pF1KB4 GTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK
.:.: :.:::: : :. . .::.: :: :...:: ::: :::::::::::: :::::::
CCDS54 NTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEK
350 360 370 380 390 400
390 400 410 420 430 440
pF1KB4 PFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAKKL
::.::: ::...::::::::::::::::::::.::.::::::::::::::::::...::.
CCDS54 PFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKI
410 420 430 440 450 460
450 460
pF1KB4 PNWQMEVSKLNDIALPPTPAPTQ
:.:: ::.::: :: .:
CCDS54 PGWQAEVGKLNRIASAESPGSPLVSMPASA
470 480 490
>>CCDS1668.1 KLF11 gene_id:8462|Hs108|chr2 (512 aa)
initn: 942 init1: 740 opt: 904 Z-score: 449.6 bits: 92.6 E(32554): 1e-18
Smith-Waterman score: 1046; 40.3% identity (61.9% similar) in 494 aa overlap (6-465:22-501)
10 20 30 40
pF1KB4 MEERMEMISERPK-ESMYSWNKTAEKSDFEAVEALMSMSCSWKS
: : :: . .: : . :..:.::::::. :: :: .
CCDS16 MHTPDFAGPDDARAVDIMDICESILERKRHDSERSTCSILEQTDMEAVEALVCMS-SWGQ
10 20 30 40 50
50 60 70 80 90
pF1KB4 DFKK--YVENRPVTPVSD---LSEEENLLPGTP----DFHTIPAFCLTPPYSPSDFEPSQ
.: .. ::.::::: .. .. .:: :::.. ..:.::: ::. :::
CCDS16 RSQKGDLLRIRPLTPVSDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPST
60 70 80 90 100 110
100 110 120 130 140
pF1KB4 ---VSNLMAPAPSTVHFKSLSDTAKPHIAAPFKEEEK----SPVSAPKLP-KAQATSVIR
:: .. . . . :...: : :. :: :. : .:..:::::
CCDS16 RTPVSPQVTDSKACTATDVLQSSAVVARALSGGAERGLLGLEPV--PSSPCRAKGTSVIR
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB4 HTADAQLCNHQTCPMKAASILNYQNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCE----
::... : . . ... . :... .. . .: : .:.
CCDS16 HTGESPAACFPTIQTPDCRLSDSREGEEQLLGHFET-LQDTHLTDSLLSTNLVSCQPCLH
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB4 RNTVADVDEKASAALYDFSVPSSETVICRSQPAPVSPQQKSVLVSPPAVSAGGVPPMPVI
.. . .:.. : . .: . : .: . .. . : .:.. :: ::.
CCDS16 KSGGLLLTDKGQQAGWPGAVQT-----C----SPKNYENDLPRKTTPLISVS-VPAPPVL
240 250 260 270 280
270 280 290 300 310
pF1KB4 CQMVP-------LPA--NNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQP
:::.: ::: . : .: : : : ::.: ::.::::.:.::
CCDS16 CQMIPVTGQSSMLPAFLKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQG
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB4 VVQSSKP---PVVSPNGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYF
.. : :.. ..:.: :.:::: : :. . .::.: :: :...:: ::: ::::
CCDS16 ALPPPAPCAANVMAAGNTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYF
350 360 370 380 390 400
380 390 400 410 420 430
pF1KB4 KSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRS
:::::::: :::::::::.::: ::...::::::::::::::::::::.::.::::::::
CCDS16 KSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRS
410 420 430 440 450 460
440 450 460
pF1KB4 DHLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
::::::::::...::.:.:: ::.::: :: .:
CCDS16 DHLTKHARRHMTTKKIPGWQAEVGKLNRIASAESPGSPLVSMPASA
470 480 490 500 510
469 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:12:38 2016 done: Thu Nov 3 14:12:38 2016
Total Scan time: 3.810 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]