Result of FASTA (ccds) for
pF1KB3845
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3845, 350 aa
1>>>pF1KB3845 350 - 350 aa - 350 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4368+/-0.000851; mu= 16.4321+/- 0.051
mean_var=78.9720+/-15.372, 0's: 0 Z-trim(107.3): 45 B-trim: 0 in 0/51
Lambda= 0.144324
statistics sampled from 9429 (9473) to 9429 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.291), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS14027.2 SEPT3 gene_id:55964|Hs108|chr22 ( 350) 2321 492.7 1.9e-139
CCDS14026.2 SEPT3 gene_id:55964|Hs108|chr22 ( 358) 2236 475.0 4.1e-134
CCDS74166.1 SEPT9 gene_id:10801|Hs108|chr17 ( 362) 1506 323.0 2.3e-88
CCDS45793.1 SEPT9 gene_id:10801|Hs108|chr17 ( 422) 1504 322.7 3.5e-88
CCDS45794.1 SEPT9 gene_id:10801|Hs108|chr17 ( 474) 1504 322.7 3.9e-88
CCDS77122.1 SEPT9 gene_id:10801|Hs108|chr17 ( 567) 1504 322.8 4.4e-88
CCDS45791.1 SEPT9 gene_id:10801|Hs108|chr17 ( 568) 1504 322.8 4.4e-88
CCDS45792.1 SEPT9 gene_id:10801|Hs108|chr17 ( 579) 1504 322.8 4.5e-88
CCDS45790.1 SEPT9 gene_id:10801|Hs108|chr17 ( 586) 1504 322.8 4.6e-88
CCDS45795.1 SEPT9 gene_id:10801|Hs108|chr17 ( 335) 1499 321.6 6e-88
CCDS10522.1 SEPT12 gene_id:124404|Hs108|chr16 ( 358) 1316 283.5 1.9e-76
CCDS11609.1 SEPT4 gene_id:5414|Hs108|chr17 ( 459) 1060 230.3 2.5e-60
CCDS56041.1 SEPT4 gene_id:5414|Hs108|chr17 ( 470) 1060 230.3 2.6e-60
CCDS11610.1 SEPT4 gene_id:5414|Hs108|chr17 ( 478) 1060 230.3 2.6e-60
CCDS58582.1 SEPT4 gene_id:5414|Hs108|chr17 ( 493) 1060 230.3 2.7e-60
CCDS13764.1 SEPT5 gene_id:5413|Hs108|chr22 ( 369) 1018 221.4 9.2e-58
CCDS2548.1 SEPT2 gene_id:4735|Hs108|chr2 ( 361) 979 213.3 2.5e-55
CCDS74682.1 SEPT2 gene_id:4735|Hs108|chr2 ( 396) 979 213.3 2.7e-55
CCDS58581.1 SEPT4 gene_id:5414|Hs108|chr17 ( 331) 955 208.3 7.5e-54
CCDS10678.3 SEPT1 gene_id:1731|Hs108|chr16 ( 414) 945 206.3 3.8e-53
CCDS75582.1 SEPT7 gene_id:989|Hs108|chr7 ( 401) 927 202.5 5e-52
CCDS77931.1 SEPT11 gene_id:55752|Hs108|chr4 ( 439) 876 191.9 8.4e-49
CCDS34018.1 SEPT11 gene_id:55752|Hs108|chr4 ( 429) 875 191.7 9.5e-49
CCDS43360.1 SEPT8 gene_id:23176|Hs108|chr5 ( 429) 863 189.2 5.4e-48
CCDS43359.1 SEPT8 gene_id:23176|Hs108|chr5 ( 442) 863 189.2 5.5e-48
CCDS43358.1 SEPT8 gene_id:23176|Hs108|chr5 ( 483) 863 189.3 5.9e-48
CCDS56224.1 SEPT5 gene_id:5413|Hs108|chr22 ( 346) 843 185.0 8.1e-47
CCDS42726.1 SEPT10 gene_id:151011|Hs108|chr2 ( 431) 843 185.1 9.6e-47
CCDS82496.1 SEPT10 gene_id:151011|Hs108|chr2 ( 450) 842 184.9 1.2e-46
CCDS46383.1 SEPT10 gene_id:151011|Hs108|chr2 ( 454) 842 184.9 1.2e-46
CCDS82497.1 SEPT10 gene_id:151011|Hs108|chr2 ( 544) 842 184.9 1.3e-46
CCDS14585.1 SEPT6 gene_id:23157|Hs108|chrX ( 427) 835 183.4 3e-46
CCDS14583.1 SEPT6 gene_id:23157|Hs108|chrX ( 429) 835 183.4 3.1e-46
CCDS14584.1 SEPT6 gene_id:23157|Hs108|chrX ( 434) 835 183.4 3.1e-46
CCDS63195.1 SEPT2 gene_id:4735|Hs108|chr2 ( 371) 829 182.1 6.5e-46
CCDS5519.2 SEPT14 gene_id:346288|Hs108|chr7 ( 432) 827 181.7 9.7e-46
CCDS47262.1 SEPT8 gene_id:23176|Hs108|chr5 ( 369) 718 159.0 5.8e-39
CCDS75298.1 SEPT8 gene_id:23176|Hs108|chr5 ( 440) 697 154.7 1.4e-37
CCDS53987.1 SEPT12 gene_id:124404|Hs108|chr16 ( 312) 649 144.6 1.1e-34
CCDS45743.1 SEPT4 gene_id:5414|Hs108|chr17 ( 274) 566 127.2 1.6e-29
>>CCDS14027.2 SEPT3 gene_id:55964|Hs108|chr22 (350 aa)
initn: 2321 init1: 2321 opt: 2321 Z-score: 2617.1 bits: 492.7 E(32554): 1.9e-139
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB3 MSKGLPETRTDAAMSELVPEPRPKPAVPMKPMSINSNLLGYIGIDTIIEQMRKKTMKTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSKGLPETRTDAAMSELVPEPRPKPAVPMKPMSINSNLLGYIGIDTIIEQMRKKTMKTGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALL
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 RDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPVSVDTEESHDSNP
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPVSVDTEESHDSNP
310 320 330 340 350
>>CCDS14026.2 SEPT3 gene_id:55964|Hs108|chr22 (358 aa)
initn: 2236 init1: 2236 opt: 2236 Z-score: 2521.3 bits: 475.0 E(32554): 4.1e-134
Smith-Waterman score: 2236; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KB3 MSKGLPETRTDAAMSELVPEPRPKPAVPMKPMSINSNLLGYIGIDTIIEQMRKKTMKTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSKGLPETRTDAAMSELVPEPRPKPAVPMKPMSINSNLLGYIGIDTIIEQMRKKTMKTGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 DFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 TGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 FDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALL
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 RDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPVSVDTEESHDSNP
:::::::::::::::::::::::::::::::::::::
CCDS14 RDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPGEGLLGTVLPPVPATPCPTAE
310 320 330 340 350
>>CCDS74166.1 SEPT9 gene_id:10801|Hs108|chr17 (362 aa)
initn: 1509 init1: 1119 opt: 1506 Z-score: 1699.8 bits: 323.0 E(32554): 2.3e-88
Smith-Waterman score: 1506; 65.6% identity (83.7% similar) in 349 aa overlap (8-350:16-360)
10 20 30 40
pF1KB3 MSKGLPETRTDAAMS---ELVPEPRPKPAVPMKPMSINSNL---LGYIGIDT
: :.:: : ... :: .. . : : : . .::.:::.
CCDS74 MAGAGCTGTWSWLWGTATEAAPSCVGDMADTPRDA-GLKQAPASRNEKAPVDFGYVGIDS
10 20 30 40 50
50 60 70 80 90 100
pF1KB3 IIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIK
:.::::.:.:: ::.::::::::::::::::.::::::..:::. . . ::.::::.:::
CCDS74 ILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB3 AIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRI
.: : ::: ::.:::::::::::::.:::::::.:: :.::.::::.:.::::: :::::
CCDS74 SITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRI
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB3 PDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRK
:::::::::::: :::::::::.::::.:::::::.::::::::.::::. .::::.
CCDS74 PDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB3 ELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGI
.: :::. ::::::::: ::. :.:.: : .::::::::.::::::::.::::: ::
CCDS74 DLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFAVVGSDHEYQVNGKRILGRKTKWGT
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB3 IEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPVSVDTEESH
::::: .::::: :::..::::.:..:..: .::.:.::.::::. : .. ::..
CCDS74 IEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRLNE--GSSAMANGMEEKE
300 310 320 330 340 350
350
pF1KB3 DSNP
:
CCDS74 PEAPEM
360
>>CCDS45793.1 SEPT9 gene_id:10801|Hs108|chr17 (422 aa)
initn: 1531 init1: 1119 opt: 1504 Z-score: 1696.6 bits: 322.7 E(32554): 3.5e-88
Smith-Waterman score: 1504; 64.0% identity (83.5% similar) in 358 aa overlap (1-350:67-420)
10 20
pF1KB3 MSKGLPETR--TDAAMS---ELVPEPRPKP
.... :... :.:: : ... ::
CCDS45 APSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDA-
40 50 60 70 80 90
30 40 50 60 70 80
pF1KB3 AVPMKPMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLF
.. . : : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::
CCDS45 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLF
100 110 120 130 140 150
90 100 110 120 130 140
pF1KB3 KSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPI
::..:::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.::
CCDS45 KSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPI
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB3 EKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNI
:.::.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::
CCDS45 MKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI
220 230 240 250 260 270
210 220 230 240 250 260
pF1KB3 IPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFA
.::::::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .:::
CCDS45 VPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFA
280 290 300 310 320 330
270 280 290 300 310 320
pF1KB3 VVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE
:::::.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:
CCDS45 VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFE
340 350 360 370 380 390
330 340 350
pF1KB3 TYRAKRLNDNGGLPPVSVDTEESHDSNP
.::.::::. : .. ::.. :
CCDS45 AYRVKRLNE--GSSAMANGMEEKEPEAPEM
400 410 420
>>CCDS45794.1 SEPT9 gene_id:10801|Hs108|chr17 (474 aa)
initn: 1509 init1: 1119 opt: 1504 Z-score: 1695.9 bits: 322.7 E(32554): 3.9e-88
Smith-Waterman score: 1504; 64.9% identity (83.0% similar) in 353 aa overlap (4-350:124-472)
10 20 30
pF1KB3 MSKGLPETRTDAAMS---ELVPEPRPKPAVPMK
: . :.:: : ... :: .. .
CCDS45 HRLPCRGLVSGFTGLRGQEEDDLAFCLATIGSDRQATEAAPSCVGDMADTPRDA-GLKQA
100 110 120 130 140 150
40 50 60 70 80
pF1KB3 PMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVS
: : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::::..:
CCDS45 PASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKIS
160 170 180 190 200 210
90 100 110 120 130 140
pF1KB3 RKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYIN
::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.:: :.::
CCDS45 RKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFIN
220 230 240 250 260 270
150 160 170 180 190 200
pF1KB3 EQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIA
.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::.::::
CCDS45 DQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNIVPVIA
280 290 300 310 320 330
210 220 230 240 250 260
pF1KB3 KADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSD
::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .::::::::
CCDS45 KADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFAVVGSD
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB3 KEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYETYRAK
.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:.::.:
CCDS45 HEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFEAYRVK
400 410 420 430 440 450
330 340 350
pF1KB3 RLNDNGGLPPVSVDTEESHDSNP
:::. : .. ::.. :
CCDS45 RLNE--GSSAMANGMEEKEPEAPEM
460 470
>>CCDS77122.1 SEPT9 gene_id:10801|Hs108|chr17 (567 aa)
initn: 1509 init1: 1119 opt: 1504 Z-score: 1694.8 bits: 322.8 E(32554): 4.4e-88
Smith-Waterman score: 1504; 64.0% identity (83.5% similar) in 358 aa overlap (1-350:212-565)
10 20
pF1KB3 MSKGLPETR--TDAAMS---ELVPEPRPKP
.... :... :.:: : ... ::
CCDS77 APSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDA-
190 200 210 220 230 240
30 40 50 60 70 80
pF1KB3 AVPMKPMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLF
.. . : : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::
CCDS77 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLF
250 260 270 280 290 300
90 100 110 120 130 140
pF1KB3 KSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPI
::..:::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.::
CCDS77 KSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPI
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB3 EKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNI
:.::.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::
CCDS77 MKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI
370 380 390 400 410 420
210 220 230 240 250 260
pF1KB3 IPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFA
.::::::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .:::
CCDS77 VPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFA
430 440 450 460 470
270 280 290 300 310 320
pF1KB3 VVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE
:::::.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:
CCDS77 VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFE
480 490 500 510 520 530
330 340 350
pF1KB3 TYRAKRLNDNGGLPPVSVDTEESHDSNP
.::.::::. : .. ::.. :
CCDS77 AYRVKRLNE--GSSAMANGMEEKEPEAPEM
540 550 560
>>CCDS45791.1 SEPT9 gene_id:10801|Hs108|chr17 (568 aa)
initn: 1509 init1: 1119 opt: 1504 Z-score: 1694.8 bits: 322.8 E(32554): 4.4e-88
Smith-Waterman score: 1504; 64.0% identity (83.5% similar) in 358 aa overlap (1-350:213-566)
10 20
pF1KB3 MSKGLPETR--TDAAMS---ELVPEPRPKP
.... :... :.:: : ... ::
CCDS45 APSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDA-
190 200 210 220 230 240
30 40 50 60 70 80
pF1KB3 AVPMKPMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLF
.. . : : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::
CCDS45 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLF
250 260 270 280 290 300
90 100 110 120 130 140
pF1KB3 KSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPI
::..:::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.::
CCDS45 KSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPI
310 320 330 340 350 360
150 160 170 180 190 200
pF1KB3 EKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNI
:.::.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::
CCDS45 MKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI
370 380 390 400 410 420
210 220 230 240 250 260
pF1KB3 IPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFA
.::::::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .:::
CCDS45 VPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFA
430 440 450 460 470 480
270 280 290 300 310 320
pF1KB3 VVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE
:::::.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:
CCDS45 VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFE
490 500 510 520 530 540
330 340 350
pF1KB3 TYRAKRLNDNGGLPPVSVDTEESHDSNP
.::.::::. : .. ::.. :
CCDS45 AYRVKRLNE--GSSAMANGMEEKEPEAPEM
550 560
>>CCDS45792.1 SEPT9 gene_id:10801|Hs108|chr17 (579 aa)
initn: 1509 init1: 1119 opt: 1504 Z-score: 1694.6 bits: 322.8 E(32554): 4.5e-88
Smith-Waterman score: 1504; 64.0% identity (83.5% similar) in 358 aa overlap (1-350:224-577)
10 20
pF1KB3 MSKGLPETR--TDAAMS---ELVPEPRPKP
.... :... :.:: : ... ::
CCDS45 APSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDA-
200 210 220 230 240 250
30 40 50 60 70 80
pF1KB3 AVPMKPMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLF
.. . : : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::
CCDS45 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLF
260 270 280 290 300 310
90 100 110 120 130 140
pF1KB3 KSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPI
::..:::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.::
CCDS45 KSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPI
320 330 340 350 360 370
150 160 170 180 190 200
pF1KB3 EKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNI
:.::.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::
CCDS45 MKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI
380 390 400 410 420 430
210 220 230 240 250 260
pF1KB3 IPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFA
.::::::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .:::
CCDS45 VPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFA
440 450 460 470 480 490
270 280 290 300 310 320
pF1KB3 VVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE
:::::.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:
CCDS45 VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFE
500 510 520 530 540 550
330 340 350
pF1KB3 TYRAKRLNDNGGLPPVSVDTEESHDSNP
.::.::::. : .. ::.. :
CCDS45 AYRVKRLNE--GSSAMANGMEEKEPEAPEM
560 570
>>CCDS45790.1 SEPT9 gene_id:10801|Hs108|chr17 (586 aa)
initn: 1509 init1: 1119 opt: 1504 Z-score: 1694.6 bits: 322.8 E(32554): 4.6e-88
Smith-Waterman score: 1504; 64.0% identity (83.5% similar) in 358 aa overlap (1-350:231-584)
10 20
pF1KB3 MSKGLPETR--TDAAMS---ELVPEPRPKP
.... :... :.:: : ... ::
CCDS45 APSPAQTLENSEPAPVSQLQSRLEPKPQPPVAEATPRSQEATEAAPSCVGDMADTPRDA-
210 220 230 240 250
30 40 50 60 70 80
pF1KB3 AVPMKPMSINSNL---LGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLF
.. . : : : . .::.:::.:.::::.:.:: ::.::::::::::::::::.::::
CCDS45 GLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLF
260 270 280 290 300 310
90 100 110 120 130 140
pF1KB3 KSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPI
::..:::. . . ::.::::.:::.: : ::: ::.:::::::::::::.:::::::.::
CCDS45 KSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPI
320 330 340 350 360 370
150 160 170 180 190 200
pF1KB3 EKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNI
:.::.::::.:.::::: ::::::::::::::::: :::::::::.::::.:::::::
CCDS45 MKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI
380 390 400 410 420 430
210 220 230 240 250 260
pF1KB3 IPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFA
.::::::::.::::. .::::. .: :::. ::::::::: ::. :.:.: : .:::
CCDS45 VPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFR-EMIPFA
440 450 460 470 480 490
270 280 290 300 310 320
pF1KB3 VVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE
:::::.::::::::.::::: :: ::::: .::::: :::..::::.:..:..: .::.:
CCDS45 VVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQNIKDITSSIHFE
500 510 520 530 540 550
330 340 350
pF1KB3 TYRAKRLNDNGGLPPVSVDTEESHDSNP
.::.::::. : .. ::.. :
CCDS45 AYRVKRLNE--GSSAMANGMEEKEPEAPEM
560 570 580
>>CCDS45795.1 SEPT9 gene_id:10801|Hs108|chr17 (335 aa)
initn: 1509 init1: 1119 opt: 1499 Z-score: 1692.4 bits: 321.6 E(32554): 6e-88
Smith-Waterman score: 1499; 67.5% identity (85.2% similar) in 332 aa overlap (23-350:5-333)
10 20 30 40 50
pF1KB3 MSKGLPETRTDAAMSELVPEPRPKPA-VPMKPMSINSNL---LGYIGIDTIIEQMRKKTM
:. : . . : : : . .::.:::.:.::::.:.:
CCDS45 MADTPRDAGLKQAPASRNEKAPVDFGYVGIDSILEQMRRKAM
10 20 30 40
60 70 80 90 100 110
pF1KB3 KTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGG
: ::.::::::::::::::::.::::::..:::. . . ::.::::.:::.: : ::: :
CCDS45 KQGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKG
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 VKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLY
:.:::::::::::::.:::::::.:: :.::.::::.:.::::: :::::::::::::::
CCDS45 VRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLY
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 FISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFY
:: :::::::::.::::.:::::::.::::::::.::::. .::::. .: :::. :
CCDS45 FIPATGHSLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 PQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCE
:::::::: ::. :.:.: : .::::::::.::::::::.::::: :: ::::: .:::
CCDS45 PQKEFDEDSEDRLVNEKFR-EMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCE
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 FALLRDFVIRTHLQDLKEVTHNIHYETYRAKRLNDNGGLPPVSVDTEESHDSNP
:: :::..::::.:..:..: .::.:.::.::::. : .. ::.. :
CCDS45 FAYLRDLLIRTHMQNIKDITSSIHFEAYRVKRLNE--GSSAMANGMEEKEPEAPEM
290 300 310 320 330
350 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:40:43 2016 done: Fri Nov 4 02:40:43 2016
Total Scan time: 2.330 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]