Result of FASTA (omim) for
pF1KB3774
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3774, 350 aa
1>>>pF1KB3774 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7420+/-0.000408; mu= 19.3053+/- 0.025
mean_var=62.0452+/-12.715, 0's: 0 Z-trim(112.3): 168 B-trim: 334 in 1/51
Lambda= 0.162825
statistics sampled from 20925 (21110) to 20925 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.248), width: 16
Scan time: 6.320
The best scores are: opt bits E(85289)
NP_008858 (OMIM: 607188) CMP-N-acetylneuraminate-b ( 350) 2465 587.7 1.2e-167
XP_005251082 (OMIM: 607187) PREDICTED: CMP-N-acety ( 340) 1178 285.4 1.2e-76
NP_003024 (OMIM: 607187) CMP-N-acetylneuraminate-b ( 340) 1178 285.4 1.2e-76
XP_011515527 (OMIM: 607187) PREDICTED: CMP-N-acety ( 340) 1178 285.4 1.2e-76
NP_775479 (OMIM: 607187) CMP-N-acetylneuraminate-b ( 340) 1178 285.4 1.2e-76
XP_016869226 (OMIM: 607187) PREDICTED: CMP-N-acety ( 340) 1178 285.4 1.2e-76
XP_016869225 (OMIM: 607187) PREDICTED: CMP-N-acety ( 340) 1178 285.4 1.2e-76
XP_006716680 (OMIM: 607187) PREDICTED: CMP-N-acety ( 340) 1178 285.4 1.2e-76
XP_005257011 (OMIM: 610137) PREDICTED: alpha-N-ace ( 346) 354 91.8 2.3e-18
XP_016873623 (OMIM: 104240) PREDICTED: CMP-N-acety ( 329) 299 78.9 1.7e-14
NP_006269 (OMIM: 104240) CMP-N-acetylneuraminate-b ( 329) 299 78.9 1.7e-14
NP_001241688 (OMIM: 104240) CMP-N-acetylneuraminat ( 332) 299 78.9 1.7e-14
NP_001241687 (OMIM: 104240) CMP-N-acetylneuraminat ( 333) 299 78.9 1.8e-14
NP_001241686 (OMIM: 104240) CMP-N-acetylneuraminat ( 333) 299 78.9 1.8e-14
XP_011541262 (OMIM: 104240) PREDICTED: CMP-N-acety ( 415) 299 79.0 2.1e-14
XP_011541261 (OMIM: 104240) PREDICTED: CMP-N-acety ( 462) 299 79.0 2.3e-14
XP_016857608 (OMIM: 606494) PREDICTED: CMP-N-acety ( 282) 292 77.2 4.8e-14
XP_016857604 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 292 77.3 5.6e-14
XP_006710891 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 292 77.3 5.6e-14
XP_016857603 (OMIM: 606494) PREDICTED: CMP-N-acety ( 341) 292 77.3 5.6e-14
NP_006270 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 375) 290 76.8 8.3e-14
XP_016857602 (OMIM: 606494) PREDICTED: CMP-N-acety ( 375) 290 76.8 8.3e-14
XP_006710888 (OMIM: 606494) PREDICTED: CMP-N-acety ( 434) 290 76.9 9.3e-14
XP_016857605 (OMIM: 606494) PREDICTED: CMP-N-acety ( 340) 287 76.1 1.3e-13
XP_011540285 (OMIM: 606494) PREDICTED: CMP-N-acety ( 340) 287 76.1 1.3e-13
NP_777629 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 359) 287 76.1 1.3e-13
XP_011540282 (OMIM: 606494) PREDICTED: CMP-N-acety ( 379) 287 76.1 1.4e-13
NP_777624 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 390) 287 76.1 1.4e-13
XP_016857600 (OMIM: 606494) PREDICTED: CMP-N-acety ( 392) 287 76.1 1.4e-13
XP_016857601 (OMIM: 606494) PREDICTED: CMP-N-acety ( 392) 287 76.1 1.4e-13
XP_016857610 (OMIM: 606494) PREDICTED: CMP-N-acety ( 268) 285 75.5 1.4e-13
XP_016857609 (OMIM: 606494) PREDICTED: CMP-N-acety ( 268) 285 75.5 1.4e-13
NP_777631 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 413) 287 76.2 1.5e-13
XP_006710890 (OMIM: 606494) PREDICTED: CMP-N-acety ( 418) 287 76.2 1.5e-13
NP_777628 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 429) 287 76.2 1.5e-13
NP_777623 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 444) 287 76.2 1.5e-13
XP_011540279 (OMIM: 606494) PREDICTED: CMP-N-acety ( 449) 287 76.2 1.6e-13
XP_011540278 (OMIM: 606494) PREDICTED: CMP-N-acety ( 472) 287 76.2 1.6e-13
XP_011540276 (OMIM: 606494) PREDICTED: CMP-N-acety ( 488) 287 76.2 1.7e-13
XP_011540289 (OMIM: 606494) PREDICTED: CMP-N-acety ( 327) 285 75.6 1.7e-13
XP_011540290 (OMIM: 606494) PREDICTED: CMP-N-acety ( 327) 285 75.6 1.7e-13
XP_011540275 (OMIM: 606494) PREDICTED: CMP-N-acety ( 502) 287 76.2 1.7e-13
XP_016857598 (OMIM: 606494) PREDICTED: CMP-N-acety ( 503) 287 76.2 1.7e-13
NP_001257389 (OMIM: 606494) CMP-N-acetylneuraminat ( 344) 285 75.6 1.8e-13
NP_777626 (OMIM: 606494) CMP-N-acetylneuraminate-b ( 277) 272 72.5 1.2e-12
NP_001257390 (OMIM: 606494) CMP-N-acetylneuraminat ( 261) 269 71.8 1.9e-12
XP_016857607 (OMIM: 606494) PREDICTED: CMP-N-acety ( 292) 269 71.8 2.1e-12
XP_016857606 (OMIM: 606494) PREDICTED: CMP-N-acety ( 331) 269 71.9 2.3e-12
XP_011540283 (OMIM: 606494) PREDICTED: CMP-N-acety ( 346) 269 71.9 2.4e-12
NP_001257391 (OMIM: 606494) CMP-N-acetylneuraminat ( 230) 267 71.3 2.4e-12
>>NP_008858 (OMIM: 607188) CMP-N-acetylneuraminate-beta- (350 aa)
initn: 2465 init1: 2465 opt: 2465 Z-score: 3130.5 bits: 587.7 E(85289): 1.2e-167
Smith-Waterman score: 2465; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAGLQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAGLQRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQPQFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQPQFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SHNTNEVLEKLFQIVPGENPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SHNTNEVLEKLFQIVPGENPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 QAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQIRFTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 QAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQIRFTY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 APVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 APVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 ADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 ADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
310 320 330 340 350
>>XP_005251082 (OMIM: 607187) PREDICTED: CMP-N-acetylneu (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
XP_005 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
XP_005 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
XP_005 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
XP_005 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
XP_005 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
XP_005 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>NP_003024 (OMIM: 607187) CMP-N-acetylneuraminate-beta- (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
NP_003 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
NP_003 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
NP_003 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
NP_003 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
NP_003 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
NP_003 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>XP_011515527 (OMIM: 607187) PREDICTED: CMP-N-acetylneu (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
XP_011 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
XP_011 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
XP_011 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
XP_011 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
XP_011 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
XP_011 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>NP_775479 (OMIM: 607187) CMP-N-acetylneuraminate-beta- (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
NP_775 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
NP_775 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
NP_775 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
NP_775 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
NP_775 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
NP_775 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>XP_016869226 (OMIM: 607187) PREDICTED: CMP-N-acetylneu (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
XP_016 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
XP_016 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
XP_016 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
XP_016 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
XP_016 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
XP_016 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>XP_016869225 (OMIM: 607187) PREDICTED: CMP-N-acetylneu (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
XP_016 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
XP_016 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
XP_016 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
XP_016 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
XP_016 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
XP_016 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>XP_006716680 (OMIM: 607187) PREDICTED: CMP-N-acetylneu (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1496.8 bits: 285.4 E(85289): 1.2e-76
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
XP_006 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
XP_006 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
XP_006 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
XP_006 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
XP_006 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
XP_006 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>XP_005257011 (OMIM: 610137) PREDICTED: alpha-N-acetylg (346 aa)
initn: 354 init1: 203 opt: 354 Z-score: 450.6 bits: 91.8 E(85289): 2.3e-18
Smith-Waterman score: 354; 30.0% identity (55.2% similar) in 357 aa overlap (8-348:10-345)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMS-LLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAGL
:.: .::. : :::. .. : .:: : : : .
XP_005 MGLPRGSFFWLL---LLLTAACSGLLFALYFSAVQRYPGPAAGARDTTSF------EAFF
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 QRLSKERLSGKSCACRRCMGDAGASDWFDSHFDG--NIS-PVWTRENMDLPPDVQRWWMM
: ... .::. :::. . : :: : :.: :: .. : .: .
XP_005 QSKASNSWTGKGQACRHLLHLAIQRH---PHFRGLFNLSIPVLLWGDLFTPALWDRLSQH
60 70 80 90 100
120 130 140 150 160
pF1KB3 LQPQFKSHNTNEVLEKLFQIVPGENPYRF----RD-PHQCRRCAVVGNSGNLRGSGYGQD
: ...:. . .... : . .. :: : .: :::::::.: : :: : .
XP_005 KAPYGWRGLSHQVIASTLSLLNGSESAKLFAPPRDTPPKCIRCAVVGNGGILNGSRQGPN
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB3 VDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPA---NVSFVLVPFKVLDLLW
.:.:....:.: : :::.:::..:. . . .. :: . :..:. :: . :: .
XP_005 IDAHDYVFRLNGAVIKGFERDVGTKTSFYGFTVNTMKNSLVSYWNLGFTSVP-QGQDLQY
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB3 IASALSTGQIRFTYAPVKS-FLRVDKEKVQIYNPAFFKYIHDRWTEHHG--RYPSTGMLV
: . ..:: :. ..: .: : . . :.: . : : .:::: :.
XP_005 I---FIPSDIR-DYVMLRSAILGVPVPEGLDKGDRFLK--SKLINTHFGDLYMPSTGALM
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB3 LFFALHVCDEVNVYGFGADSRGNWH-HYWENNRYAGEFRKTGVHDADFEAHIIDMLAKAS
:. :::.::.:..::: ... .. ::.: . : . :: ..:: . : ::.
XP_005 LLTALHTCDQVSAYGFITSNYWKFSDHYFERKMKPLIFYAN--HDLSLEAALWRDLHKAG
290 300 310 320 330
350
pF1KB3 KIEVYRGN
...:.
XP_005 ILQLYQR
340
>>XP_016873623 (OMIM: 104240) PREDICTED: CMP-N-acetylneu (329 aa)
initn: 387 init1: 219 opt: 299 Z-score: 381.1 bits: 78.9 E(85289): 1.7e-14
Smith-Waterman score: 378; 32.2% identity (66.4% similar) in 211 aa overlap (119-312:84-293)
90 100 110 120 130 140
pF1KB3 FDGNISPVWTRENMDLPPDVQRWWMMLQPQFKSHNTNEVLEKLFQIVPGENPYRFRDPHQ
. .......: ... :. . : ... .
XP_016 LFGNYSRDQPIFLRLEDYFWVKTPSAYELPYGTKGSEDLLLRVLAITSSSIPKNIQS-LR
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB3 CRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNL
::::.::::. ::.:. :. .. .. ..:.:.::..:.: ::::.:: ...:::::.
XP_016 CRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFD
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB3 PA-----NVSFVLVPFKVLDLLWIASALSTGQ-IRFTYAPVKSFL-RVDKEKVQIYNPAF
: .. .::: ::..:. :: . :: . .: . .. :. ....: :: :
XP_016 PKVENNPDTLLVLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFF
180 190 200 210 220 230
270 280 290 300 310
pF1KB3 FKYIHDRWTE---HHGRY----PSTGMLVLFFALHVCDEVNVYGFG---ADSRGNWHHYW
.. :. .. : :.::.:.. .:::.:: :.. ::: : .. . ::.
XP_016 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY
240 250 260 270 280 290
320 330 340 350
pF1KB3 ENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
:
XP_016 EQITLKSMAGSGHNVSQEALAIKRMLEMGAIKNLTSF
300 310 320
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:22:15 2016 done: Sat Nov 5 05:22:16 2016
Total Scan time: 6.320 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]