Result of FASTA (ccds) for
pF1KB3774
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3774, 350 aa
1>>>pF1KB3774 350 - 350 aa - 350 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2033+/-0.000903; mu= 16.5456+/- 0.055
mean_var=60.9475+/-12.192, 0's: 0 Z-trim(105.7): 48 B-trim: 0 in 0/50
Lambda= 0.164284
statistics sampled from 8511 (8559) to 8511 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.631), E-opt: 0.2 (0.263), width: 16
Scan time: 2.530
The best scores are: opt bits E(32554)
CCDS10890.1 ST3GAL2 gene_id:6483|Hs108|chr16 ( 350) 2465 592.8 1.5e-169
CCDS6373.1 ST3GAL1 gene_id:6482|Hs108|chr8 ( 340) 1178 287.7 9.5e-78
CCDS8474.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 329) 299 79.4 4.8e-15
CCDS58194.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 332) 299 79.4 4.8e-15
CCDS58193.1 ST3GAL4 gene_id:6484|Hs108|chr11 ( 333) 299 79.4 4.8e-15
CCDS492.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 375) 290 77.3 2.4e-14
CCDS497.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 359) 287 76.5 3.7e-14
CCDS494.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 390) 287 76.6 4e-14
CCDS498.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 413) 287 76.6 4.2e-14
CCDS496.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 429) 287 76.6 4.3e-14
CCDS493.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 444) 287 76.6 4.5e-14
CCDS57989.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 344) 285 76.1 5e-14
CCDS495.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 277) 272 72.9 3.5e-13
CCDS57990.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 261) 269 72.2 5.4e-13
CCDS57988.1 ST3GAL3 gene_id:6487|Hs108|chr1 ( 345) 265 71.3 1.3e-12
CCDS11747.1 ST6GALNAC2 gene_id:10610|Hs108|chr17 ( 374) 252 68.3 1.2e-11
CCDS2933.1 ST3GAL6 gene_id:10402|Hs108|chr3 ( 331) 245 66.6 3.4e-11
CCDS74968.1 ST3GAL6 gene_id:10402|Hs108|chr3 ( 384) 245 66.6 3.9e-11
>>CCDS10890.1 ST3GAL2 gene_id:6483|Hs108|chr16 (350 aa)
initn: 2465 init1: 2465 opt: 2465 Z-score: 3157.6 bits: 592.8 E(32554): 1.5e-169
Smith-Waterman score: 2465; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAGLQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAGLQRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 SKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQPQFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQPQFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SHNTNEVLEKLFQIVPGENPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SHNTNEVLEKLFQIVPGENPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 QAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQIRFTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQIRFTY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 APVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 APVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVNVYGFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB3 ADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
310 320 330 340 350
>>CCDS6373.1 ST3GAL1 gene_id:6482|Hs108|chr8 (340 aa)
initn: 1170 init1: 958 opt: 1178 Z-score: 1509.3 bits: 287.7 E(32554): 9.5e-78
Smith-Waterman score: 1209; 49.0% identity (76.2% similar) in 349 aa overlap (2-349:6-339)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSLLFTYSHHSMATLPYLDSGALDGTHRVKLVPGYAG
: .:.: :. :..:. :....::: .:: . . .:. .. .
CCDS63 MVTLRKRTLKV--LTFLVLFIFLTSFFLNYSHTMVATTWFPKQMVLELSE---------N
10 20 30 40
60 70 80 90 100 110
pF1KB3 LQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ
:.:: :.: :.: .:.:. : ::: .:. ...:. : .: : :. :::. ::
CCDS63 LKRLIKHR----PCTCTHCIGQRKLSAWFDERFNQTMQPLLTAQNALLEDDTYRWWLRLQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PQFKSHNTNEVLEKLFQIVPGE-NPYRFRDPHQCRRCAVVGNSGNLRGSGYGQDVDGHNF
. : .: :.....::..:::. .:. . :::::::::::::: :.:: ..:.:.:
CCDS63 REKKPNNLNDTIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEIDSHDF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 IMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVSFVLVPFKVLDLLWIASALSTGQ
..:::.:::.::: :::..::::..:::: ..: :::..:::::..:: :..::..::
CCDS63 VLRMNKAPTAGFEADVGTKTTHHLVYPESFRELGDNVSMILVPFKTIDLEWVVSAITTGT
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 IRFTYAPVKSFLRVDKEKVQIYNPAFFKYIHDRWTEHHGRYPSTGMLVLFFALHVCDEVN
: :: :: . .:: ..:. ::.:::.::. : : . ::::::::.: ..:..::::::.
CCDS63 ISHTYIPVPAKIRVKQDKILIYHPAFIKYVFDNWLQGHGRYPSTGILSVIFSMHVCDEVD
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 VYGFGADSRGNWHHYWENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
.:::::::.:::::::::: :: ::::::::::::... ::. .::....:
CCDS63 LYGFGADSKGNWHHYWENNPSAGAFRKTGVHDADFESNVTATLASINKIRIFKGR
290 300 310 320 330 340
>>CCDS8474.1 ST3GAL4 gene_id:6484|Hs108|chr11 (329 aa)
initn: 387 init1: 219 opt: 299 Z-score: 383.6 bits: 79.4 E(32554): 4.8e-15
Smith-Waterman score: 378; 32.2% identity (66.4% similar) in 211 aa overlap (119-312:84-293)
90 100 110 120 130 140
pF1KB3 FDGNISPVWTRENMDLPPDVQRWWMMLQPQFKSHNTNEVLEKLFQIVPGENPYRFRDPHQ
. .......: ... :. . : ... .
CCDS84 LFGNYSRDQPIFLRLEDYFWVKTPSAYELPYGTKGSEDLLLRVLAITSSSIPKNIQS-LR
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB3 CRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNL
::::.::::. ::.:. :. .. .. ..:.:.::..:.: ::::.:: ...:::::.
CCDS84 CRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFD
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB3 PA-----NVSFVLVPFKVLDLLWIASALSTGQ-IRFTYAPVKSFL-RVDKEKVQIYNPAF
: .. .::: ::..:. :: . :: . .: . .. :. ....: :: :
CCDS84 PKVENNPDTLLVLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFF
180 190 200 210 220 230
270 280 290 300 310
pF1KB3 FKYIHDRWTE---HHGRY----PSTGMLVLFFALHVCDEVNVYGFG---ADSRGNWHHYW
.. :. .. : :.::.:.. .:::.:: :.. ::: : .. . ::.
CCDS84 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY
240 250 260 270 280 290
320 330 340 350
pF1KB3 ENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
:
CCDS84 EQITLKSMAGSGHNVSQEALAIKRMLEMGAIKNLTSF
300 310 320
>>CCDS58194.1 ST3GAL4 gene_id:6484|Hs108|chr11 (332 aa)
initn: 387 init1: 219 opt: 299 Z-score: 383.5 bits: 79.4 E(32554): 4.8e-15
Smith-Waterman score: 378; 32.2% identity (66.4% similar) in 211 aa overlap (119-312:87-296)
90 100 110 120 130 140
pF1KB3 FDGNISPVWTRENMDLPPDVQRWWMMLQPQFKSHNTNEVLEKLFQIVPGENPYRFRDPHQ
. .......: ... :. . : ... .
CCDS58 LFGNYSRDQPIFLRLEDYFWVKTPSAYELPYGTKGSEDLLLRVLAITSSSIPKNIQS-LR
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB3 CRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNL
::::.::::. ::.:. :. .. .. ..:.:.::..:.: ::::.:: ...:::::.
CCDS58 CRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFD
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB3 PA-----NVSFVLVPFKVLDLLWIASALSTGQ-IRFTYAPVKSFL-RVDKEKVQIYNPAF
: .. .::: ::..:. :: . :: . .: . .. :. ....: :: :
CCDS58 PKVENNPDTLLVLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFF
180 190 200 210 220 230
270 280 290 300 310
pF1KB3 FKYIHDRWTE---HHGRY----PSTGMLVLFFALHVCDEVNVYGFG---ADSRGNWHHYW
.. :. .. : :.::.:.. .:::.:: :.. ::: : .. . ::.
CCDS58 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY
240 250 260 270 280 290
320 330 340 350
pF1KB3 ENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
:
CCDS58 EQITLKSMAGSGHNVSQEALAIKRMLEMGAIKNLTSF
300 310 320 330
>>CCDS58193.1 ST3GAL4 gene_id:6484|Hs108|chr11 (333 aa)
initn: 387 init1: 219 opt: 299 Z-score: 383.5 bits: 79.4 E(32554): 4.8e-15
Smith-Waterman score: 378; 32.2% identity (66.4% similar) in 211 aa overlap (119-312:88-297)
90 100 110 120 130 140
pF1KB3 FDGNISPVWTRENMDLPPDVQRWWMMLQPQFKSHNTNEVLEKLFQIVPGENPYRFRDPHQ
. .......: ... :. . : ... .
CCDS58 LFGNYSRDQPIFLRLEDYFWVKTPSAYELPYGTKGSEDLLLRVLAITSSSIPKNIQS-LR
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB3 CRRCAVVGNSGNLRGSGYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNL
::::.::::. ::.:. :. .. .. ..:.:.::..:.: ::::.:: ...:::::.
CCDS58 CRRCVVVGNGHRLRNSSLGDAINKYDVVIRLNNAPVAGYEGDVGSKTTMRLFYPESAHFD
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB3 PA-----NVSFVLVPFKVLDLLWIASALSTGQ-IRFTYAPVKSFL-RVDKEKVQIYNPAF
: .. .::: ::..:. :: . :: . .: . .. :. ....: :: :
CCDS58 PKVENNPDTLLVLVAFKAMDFHWIETILSDKKRVRKGFWKQPPLIWDVNPKQIRILNPFF
180 190 200 210 220 230
270 280 290 300 310
pF1KB3 FKYIHDRWTE---HHGRY----PSTGMLVLFFALHVCDEVNVYGFG---ADSRGNWHHYW
.. :. .. : :.::.:.. .:::.:: :.. ::: : .. . ::.
CCDS58 MEIAADKLLSLPMQQPRKIKQKPTTGLLAITLALHLCDLVHIAGFGYPDAYNKKQTIHYY
240 250 260 270 280 290
320 330 340 350
pF1KB3 ENNRYAGEFRKTGVHDADFEAHIIDMLAKASKIEVYRGN
:
CCDS58 EQITLKSMAGSGHNVSQEALAIKRMLEMGAIKNLTSF
300 310 320 330
>>CCDS492.1 ST3GAL3 gene_id:6487|Hs108|chr1 (375 aa)
initn: 364 init1: 213 opt: 290 Z-score: 371.2 bits: 77.3 E(32554): 2.4e-14
Smith-Waterman score: 392; 28.5% identity (57.3% similar) in 361 aa overlap (9-344:17-368)
10 20 30 40 50
pF1KB3 MKCSLRVWFLSVAFLLVFIMSL-LFTYSHHSMATLPYLDS-GALDGTHRVKL
:: ..:: .: :. . . : ... .:: : :.. .:
CCDS49 MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEEDSNSVVLSFDSAGQTLGSEYDRL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 VPGYAGLQRLSKERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQR
:. : :.. .: .. . ..... . . : . : : ... . : :
CCDS49 --GF--LLNLDS-KLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFR
70 80 90 100 110
120 130 140 150 160
pF1KB3 WWMMLQ---PQFKSHNTNEVLEKLFQIVPGENPYRFR---DPHQCRRCAVVGNSGNLRGS
: .. : : .. ..... ..... . ::. : .:::: .:::.: : ..
CCDS49 KWARIREFVPPFGIKGQDNLIKAILSVT---KEYRLTPALDSLRCRRCIIVGNGGVLANK
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB3 GYGQDVDGHNFIMRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVS----FVLVPFK
. :. .: .....:.:.::. :::.::::.:: .. :::.: . : . :::. ::
CCDS49 SLGSRIDDYDIVVRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFK
180 190 200 210 220 230
230 240 250 260
pF1KB3 VLDLLWIASALSTGQIRFTYAPVKSF-LRVDKE--KVQIYNPAF-----FKYI---HDRW
:. :. . .. . . :: :: :: ...: :: : : : .
CCDS49 WQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNG
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB3 TEHHGRYPSTGMLVLFFALHVCDEVNVYGFGAD-SRGNWH-HYWENNRYAGEFRKTGVHD
.: :. : ... .::: :::: : ::: : : : ::.:. :.:. .... .:.
CCDS49 LMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAA-IKESWTHN
300 310 320 330 340 350
330 340 350
pF1KB3 ADFEAHIIDMLAKASKIEVYRGN
. : ... :.:: :
CCDS49 IQREKEFLRKLVKARVITDLSSGI
360 370
>>CCDS497.1 ST3GAL3 gene_id:6487|Hs108|chr1 (359 aa)
initn: 364 init1: 213 opt: 287 Z-score: 367.6 bits: 76.5 E(32554): 3.7e-14
Smith-Waterman score: 389; 31.3% identity (58.9% similar) in 275 aa overlap (93-344:82-352)
70 80 90 100 110
pF1KB3 ERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ---PQF
: : ... . : : : .. : :
CCDS49 SKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 KSHNTNEVLEKLFQIVPGENPYRFR---DPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFI
.. ..... ..... . ::. : .:::: .:::.: : ... :. .: ....
CCDS49 GIKGQDNLIKAILSVT---KEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIV
120 130 140 150 160
180 190 200 210 220 230
pF1KB3 MRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVS----FVLVPFKVLDLLWIASALS
.:.:.::. :::.::::.:: .. :::.: . : . :::. :: :. :. .
CCDS49 VRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVY
170 180 190 200 210 220
240 250 260 270 280
pF1KB3 TGQIRFTYAPVKSF-LRVDKE--KVQIYNPAF-----FKYI---HDRWTEHHGRYPSTGM
.. . . :: :: :: ...: :: : : : . .: :. :
CCDS49 KERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGS
230 240 250 260 270 280
290 300 310 320 330
pF1KB3 LVLFFALHVCDEVNVYGFGAD-SRGNWH-HYWENNRYAGEFRKTGVHDADFEAHIIDMLA
... .::: :::: : ::: : : : ::.:. :.:. .... .:. . : ... :.
CCDS49 VAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAA-IKESWTHNIQREKEFLRKLV
290 300 310 320 330 340
340 350
pF1KB3 KASKIEVYRGN
:: :
CCDS49 KARVITDLSSGI
350
>>CCDS494.1 ST3GAL3 gene_id:6487|Hs108|chr1 (390 aa)
initn: 364 init1: 213 opt: 287 Z-score: 367.1 bits: 76.6 E(32554): 4e-14
Smith-Waterman score: 389; 31.3% identity (58.9% similar) in 275 aa overlap (93-344:113-383)
70 80 90 100 110
pF1KB3 ERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ---PQF
: : ... . : : : .. : :
CCDS49 SKLPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB3 KSHNTNEVLEKLFQIVPGENPYRFR---DPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFI
.. ..... ..... . ::. : .:::: .:::.: : ... :. .: ....
CCDS49 GIKGQDNLIKAILSVT---KEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIV
150 160 170 180 190
180 190 200 210 220 230
pF1KB3 MRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVS----FVLVPFKVLDLLWIASALS
.:.:.::. :::.::::.:: .. :::.: . : . :::. :: :. :. .
CCDS49 VRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVY
200 210 220 230 240 250
240 250 260 270 280
pF1KB3 TGQIRFTYAPVKSF-LRVDKE--KVQIYNPAF-----FKYI---HDRWTEHHGRYPSTGM
.. . . :: :: :: ...: :: : : : . .: :. :
CCDS49 KERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGS
260 270 280 290 300 310
290 300 310 320 330
pF1KB3 LVLFFALHVCDEVNVYGFGAD-SRGNWH-HYWENNRYAGEFRKTGVHDADFEAHIIDMLA
... .::: :::: : ::: : : : ::.:. :.:. .... .:. . : ... :.
CCDS49 VAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAA-IKESWTHNIQREKEFLRKLV
320 330 340 350 360 370
340 350
pF1KB3 KASKIEVYRGN
:: :
CCDS49 KARVITDLSSGI
380 390
>>CCDS498.1 ST3GAL3 gene_id:6487|Hs108|chr1 (413 aa)
initn: 364 init1: 213 opt: 287 Z-score: 366.7 bits: 76.6 E(32554): 4.2e-14
Smith-Waterman score: 389; 31.3% identity (58.9% similar) in 275 aa overlap (93-344:136-406)
70 80 90 100 110
pF1KB3 ERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ---PQF
: : ... . : : : .. : :
CCDS49 LPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPF
110 120 130 140 150 160
120 130 140 150 160 170
pF1KB3 KSHNTNEVLEKLFQIVPGENPYRFR---DPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFI
.. ..... ..... . ::. : .:::: .:::.: : ... :. .: ....
CCDS49 GIKGQDNLIKAILSVT---KEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIV
170 180 190 200 210 220
180 190 200 210 220 230
pF1KB3 MRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVS----FVLVPFKVLDLLWIASALS
.:.:.::. :::.::::.:: .. :::.: . : . :::. :: :. :. .
CCDS49 VRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVY
230 240 250 260 270 280
240 250 260 270 280
pF1KB3 TGQIRFTYAPVKSF-LRVDKE--KVQIYNPAF-----FKYI---HDRWTEHHGRYPSTGM
.. . . :: :: :: ...: :: : : : . .: :. :
CCDS49 KERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGS
290 300 310 320 330 340
290 300 310 320 330
pF1KB3 LVLFFALHVCDEVNVYGFGAD-SRGNWH-HYWENNRYAGEFRKTGVHDADFEAHIIDMLA
... .::: :::: : ::: : : : ::.:. :.:. .... .:. . : ... :.
CCDS49 VAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAA-IKESWTHNIQREKEFLRKLV
350 360 370 380 390 400
340 350
pF1KB3 KASKIEVYRGN
:: :
CCDS49 KARVITDLSSGI
410
>>CCDS496.1 ST3GAL3 gene_id:6487|Hs108|chr1 (429 aa)
initn: 364 init1: 213 opt: 287 Z-score: 366.4 bits: 76.6 E(32554): 4.3e-14
Smith-Waterman score: 389; 31.3% identity (58.9% similar) in 275 aa overlap (93-344:152-422)
70 80 90 100 110
pF1KB3 ERLSGKSCACRRCMGDAGASDWFDSHFDGNISPVWTRENMDLPPDVQRWWMMLQ---PQF
: : ... . : : : .. : :
CCDS49 LPRPAELATKYANFSEGACKPGYASALMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPF
130 140 150 160 170 180
120 130 140 150 160 170
pF1KB3 KSHNTNEVLEKLFQIVPGENPYRFR---DPHQCRRCAVVGNSGNLRGSGYGQDVDGHNFI
.. ..... ..... . ::. : .:::: .:::.: : ... :. .: ....
CCDS49 GIKGQDNLIKAILSVT---KEYRLTPALDSLRCRRCIIVGNGGVLANKSLGSRIDDYDIV
190 200 210 220 230
180 190 200 210 220 230
pF1KB3 MRMNQAPTVGFEQDVGSRTTHHFMYPESAKNLPANVS----FVLVPFKVLDLLWIASALS
.:.:.::. :::.::::.:: .. :::.: . : . :::. :: :. :. .
CCDS49 VRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVY
240 250 260 270 280 290
240 250 260 270 280
pF1KB3 TGQIRFTYAPVKSF-LRVDKE--KVQIYNPAF-----FKYI---HDRWTEHHGRYPSTGM
.. . . :: :: :: ...: :: : : : . .: :. :
CCDS49 KERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGS
300 310 320 330 340 350
290 300 310 320 330
pF1KB3 LVLFFALHVCDEVNVYGFGAD-SRGNWH-HYWENNRYAGEFRKTGVHDADFEAHIIDMLA
... .::: :::: : ::: : : : ::.:. :.:. .... .:. . : ... :.
CCDS49 VAVTMALHGCDEVAVAGFGYDMSTPNAPLHYYETVRMAA-IKESWTHNIQREKEFLRKLV
360 370 380 390 400 410
340 350
pF1KB3 KASKIEVYRGN
:: :
CCDS49 KARVITDLSSGI
420
350 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:22:14 2016 done: Sat Nov 5 05:22:15 2016
Total Scan time: 2.530 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]