Result of FASTA (omim) for
pF1KB3732
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3732, 461 aa
1>>>pF1KB3732 461 - 461 aa - 461 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8601+/-0.000384; mu= 15.9255+/- 0.024
mean_var=94.9747+/-19.089, 0's: 0 Z-trim(114.8): 412 B-trim: 0 in 0/52
Lambda= 0.131604
statistics sampled from 24440 (24855) to 24440 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.291), width: 16
Scan time: 8.250
The best scores are: opt bits E(85289)
XP_011532354 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_005265481 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862601 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532349 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862597 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862599 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
NP_000452 (OMIM: 145650,188570,190160,274300) thyr ( 461) 3173 612.9 5.7e-175
NP_001121648 (OMIM: 145650,188570,190160,274300) t ( 461) 3173 612.9 5.7e-175
NP_001121649 (OMIM: 145650,188570,190160,274300) t ( 461) 3173 612.9 5.7e-175
NP_001239563 (OMIM: 145650,188570,190160,274300) t ( 461) 3173 612.9 5.7e-175
XP_005265478 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862598 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532352 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862600 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532348 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532350 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_006713381 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532351 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_005265480 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_006713380 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_011532353 (OMIM: 145650,188570,190160,274300) P ( 461) 3173 612.9 5.7e-175
XP_016862604 (OMIM: 145650,188570,190160,274300) P ( 430) 2935 567.7 2.2e-161
XP_016862603 (OMIM: 145650,188570,190160,274300) P ( 430) 2935 567.7 2.2e-161
XP_011532355 (OMIM: 145650,188570,190160,274300) P ( 430) 2935 567.7 2.2e-161
XP_016862602 (OMIM: 145650,188570,190160,274300) P ( 430) 2935 567.7 2.2e-161
NP_955366 (OMIM: 190120,614450) thyroid hormone re ( 410) 2178 423.9 3.9e-118
NP_001177847 (OMIM: 190120,614450) thyroid hormone ( 451) 1923 375.6 1.6e-103
NP_003241 (OMIM: 190120,614450) thyroid hormone re ( 490) 1918 374.6 3.2e-103
NP_001177848 (OMIM: 190120,614450) thyroid hormone ( 490) 1918 374.6 3.2e-103
NP_001238863 (OMIM: 602423) oxysterols receptor LX ( 453) 755 153.8 8.9e-37
NP_001238864 (OMIM: 602423) oxysterols receptor LX ( 453) 755 153.8 8.9e-37
NP_001123574 (OMIM: 602423) oxysterols receptor LX ( 402) 747 152.2 2.3e-36
XP_005252766 (OMIM: 602423) PREDICTED: oxysterols ( 402) 747 152.2 2.3e-36
XP_016872547 (OMIM: 602423) PREDICTED: oxysterols ( 402) 747 152.2 2.3e-36
XP_006718179 (OMIM: 602423) PREDICTED: oxysterols ( 402) 747 152.2 2.3e-36
XP_005252767 (OMIM: 602423) PREDICTED: oxysterols ( 402) 747 152.2 2.3e-36
XP_006718178 (OMIM: 602423) PREDICTED: oxysterols ( 402) 747 152.2 2.3e-36
XP_005252764 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
XP_011518107 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
XP_005252762 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
XP_006718176 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
NP_005684 (OMIM: 602423) oxysterols receptor LXR-a ( 447) 747 152.3 2.5e-36
XP_005252763 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
XP_006718175 (OMIM: 602423) PREDICTED: oxysterols ( 447) 747 152.3 2.5e-36
NP_148934 (OMIM: 603065) nuclear receptor subfamil ( 397) 616 127.4 7.1e-29
XP_016872545 (OMIM: 602423) PREDICTED: oxysterols ( 332) 614 126.9 8.1e-29
XP_016872546 (OMIM: 602423) PREDICTED: oxysterols ( 323) 606 125.4 2.3e-28
XP_011537342 (OMIM: 603826,617049) PREDICTED: bile ( 476) 578 120.2 1.2e-26
NP_001193906 (OMIM: 603826,617049) bile acid recep ( 476) 578 120.2 1.2e-26
NP_001193908 (OMIM: 603826,617049) bile acid recep ( 476) 578 120.2 1.2e-26
>>XP_011532354 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_011 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>XP_005265481 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_005 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>XP_016862601 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_016 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>XP_011532349 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_011 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>XP_016862597 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_016 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>XP_016862599 (OMIM: 145650,188570,190160,274300) PREDI (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
XP_016 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>NP_000452 (OMIM: 145650,188570,190160,274300) thyroid (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
NP_000 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>NP_001121648 (OMIM: 145650,188570,190160,274300) thyro (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
NP_001 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>NP_001121649 (OMIM: 145650,188570,190160,274300) thyro (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
NP_001 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
>>NP_001239563 (OMIM: 145650,188570,190160,274300) thyro (461 aa)
initn: 3173 init1: 3173 opt: 3173 Z-score: 3262.3 bits: 612.9 E(85289): 5.7e-175
Smith-Waterman score: 3173; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB3 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
370 380 390 400 410 420
430 440 450 460
pF1KB3 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
:::::::::::::::::::::::::::::::::::::::::
NP_001 LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
430 440 450 460
461 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 13:51:33 2016 done: Thu Nov 3 13:51:34 2016
Total Scan time: 8.250 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]