Result of FASTA (omim) for
pF1KB3539
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3539, 344 aa
1>>>pF1KB3539 344 - 344 aa - 344 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5258+/-0.000398; mu= 14.9423+/- 0.025
mean_var=70.9711+/-14.478, 0's: 0 Z-trim(111.7): 90 B-trim: 0 in 0/52
Lambda= 0.152242
statistics sampled from 20310 (20400) to 20310 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.239), width: 16
Scan time: 7.580
The best scores are: opt bits E(85289)
XP_006713861 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
XP_006713862 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
XP_006713863 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
XP_005247912 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
XP_011511562 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
XP_006713864 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344) 2340 523.3 2.9e-148
NP_997708 (OMIM: 604015) beta-1,4-galactosyltransf ( 344) 2340 523.3 2.9e-148
NP_003769 (OMIM: 604015) beta-1,4-galactosyltransf ( 344) 2340 523.3 2.9e-148
XP_016862890 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 303) 1519 343.0 5e-94
NP_001186802 (OMIM: 604014) beta-1,4-galactosyltra ( 393) 1018 233.0 8.3e-61
NP_001186803 (OMIM: 604014) beta-1,4-galactosyltra ( 393) 1018 233.0 8.3e-61
NP_003770 (OMIM: 604014) beta-1,4-galactosyltransf ( 393) 1018 233.0 8.3e-61
XP_005245623 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 393) 1018 233.0 8.3e-61
XP_016858205 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372) 953 218.7 1.6e-56
NP_001005417 (OMIM: 604013) beta-1,4-galactosyltra ( 372) 953 218.7 1.6e-56
XP_016858206 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372) 953 218.7 1.6e-56
NP_003771 (OMIM: 604013) beta-1,4-galactosyltransf ( 372) 953 218.7 1.6e-56
NP_085076 (OMIM: 604013) beta-1,4-galactosyltransf ( 401) 953 218.7 1.7e-56
NP_001488 (OMIM: 137060,607091) beta-1,4-galactosy ( 398) 937 215.2 1.9e-55
XP_011508395 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310) 915 210.3 4.4e-54
XP_016858203 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310) 915 210.3 4.4e-54
NP_004767 (OMIM: 604016) beta-1,4-galactosyltransf ( 388) 723 168.2 2.6e-41
XP_006722642 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338) 717 166.9 5.9e-41
XP_016881578 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338) 717 166.9 5.9e-41
NP_001317499 (OMIM: 604017) beta-1,4-galactosyltra ( 343) 717 166.9 5.9e-41
XP_005258444 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 370) 717 166.9 6.3e-41
NP_004766 (OMIM: 604017) beta-1,4-galactosyltransf ( 382) 717 166.9 6.5e-41
XP_006722641 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 344) 696 162.2 1.5e-39
XP_016881580 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 269) 651 152.3 1.1e-36
XP_016881579 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 274) 651 152.3 1.1e-36
XP_016858204 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 227) 599 140.8 2.7e-33
XP_016881581 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 202) 563 132.9 5.8e-31
XP_005251497 (OMIM: 137060,607091) PREDICTED: beta ( 357) 561 132.6 1.3e-30
NP_009186 (OMIM: 130070,604327) beta-1,4-galactosy ( 327) 396 96.3 9.5e-20
XP_016864488 (OMIM: 130070,604327) PREDICTED: beta ( 213) 328 81.3 2.1e-15
XP_006714879 (OMIM: 130070,604327) PREDICTED: beta ( 167) 221 57.8 2e-08
>>XP_006713861 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_006713862 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_006713863 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_005247912 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_011511562 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_006713864 (OMIM: 604015) PREDICTED: beta-1,4-galact (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_006 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>NP_997708 (OMIM: 604015) beta-1,4-galactosyltransferas (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
NP_997 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>NP_003769 (OMIM: 604015) beta-1,4-galactosyltransferas (344 aa)
initn: 2340 init1: 2340 opt: 2340 Z-score: 2782.7 bits: 523.3 E(85289): 2.9e-148
Smith-Waterman score: 2340; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
250 260 270 280 290 300
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
NP_003 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
310 320 330 340
>>XP_016862890 (OMIM: 604015) PREDICTED: beta-1,4-galact (303 aa)
initn: 1519 init1: 1519 opt: 1519 Z-score: 1809.0 bits: 343.0 E(85289): 5e-94
Smith-Waterman score: 1953; 88.1% identity (88.1% similar) in 344 aa overlap (1-344:1-303)
10 20 30 40 50 60
pF1KB3 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKAKEFMANFHKTLILGKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSR
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYR---------------
190 200 210 220
250 260 270 280 290 300
pF1KB3 EQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
::::::::::::::::::::::::::::::::::
XP_016 --------------------------VELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAE
230 240 250
310 320 330 340
pF1KB3 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
::::::::::::::::::::::::::::::::::::::::::::
XP_016 RMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFWFGA
260 270 280 290 300
>>NP_001186802 (OMIM: 604014) beta-1,4-galactosyltransfe (393 aa)
initn: 914 init1: 486 opt: 1018 Z-score: 1212.6 bits: 233.0 E(85289): 8.3e-61
Smith-Waterman score: 1018; 56.7% identity (75.4% similar) in 268 aa overlap (74-339:74-341)
50 60 70 80 90 100
pF1KB3 AKEFMANFHKTLILGKGKTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQA
: :: :: : : .. :.: .: :.
NP_001 PTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPLLVGPVSVSFSPVPSLAEIVE
50 60 70 80 90 100
110 120 130 140 150 160
pF1KB3 ENPKVSRG-RYRPQECKALQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQ
.::.: : :::: :. .:.::.:::: ::.:: :: ::::::::::: ::::::::
NP_001 RNPRVEPGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQ
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB3 AEGKKFNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYKCEEH-PKHLVVGRNS
: . :::::::::: :::..:.:::...:::::.:::: ::: :. . :.:..:. :.
NP_001 AGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNK
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB3 TGYRLRYSGYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEV
:: : : :::::.::. .:..:.::: :.::::::::::. ::.: :::::: :
NP_001 FGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSV
230 240 250 260 270 280
290 300 310 320 330 340
pF1KB3 GKYTMVFHTRDKGNEVNAERMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVDFW
:.: :: : ::::: : .:. :: ... : ::..: .:.:.. : .::: :::.:
NP_001 GHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQDGMNSLTYQLLARELGPLYTNITADIG
290 300 310 320 330 340
pF1KB3 FGA
NP_001 TDPRGPRAPSGPRYPPGSSQAFRQEMLQRRPPARPGPLSTANHTALRGSH
350 360 370 380 390
344 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:17:03 2016 done: Sat Nov 5 12:17:04 2016
Total Scan time: 7.580 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]