Result of FASTA (omim) for
pF1KB3482
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3482, 733 aa
1>>>pF1KB3482 733 - 733 aa - 733 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7753+/-0.000399; mu= 0.3329+/- 0.025
mean_var=199.3515+/-39.984, 0's: 0 Z-trim(118.8): 21 B-trim: 17 in 1/55
Lambda= 0.090837
statistics sampled from 32005 (32026) to 32005 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.375), width: 16
Scan time: 9.470
The best scores are: opt bits E(85289)
NP_005522 (OMIM: 147586) gamma-interferon-inducibl ( 729) 4720 631.3 4e-180
XP_016856639 (OMIM: 147586) PREDICTED: gamma-inter ( 520) 3254 439.2 2e-122
XP_005245184 (OMIM: 147586) PREDICTED: gamma-inter ( 789) 3254 439.2 2.9e-122
XP_016856638 (OMIM: 147586) PREDICTED: gamma-inter ( 677) 2868 388.6 4.3e-107
XP_006711353 (OMIM: 147586) PREDICTED: gamma-inter ( 677) 2868 388.6 4.3e-107
NP_001193496 (OMIM: 147586) gamma-interferon-induc ( 729) 2777 376.7 1.8e-103
NP_945146 (OMIM: 612677) pyrin and HIN domain-cont ( 483) 1981 272.3 3.2e-72
NP_945148 (OMIM: 612677) pyrin and HIN domain-cont ( 452) 1966 270.4 1.2e-71
NP_689714 (OMIM: 612677) pyrin and HIN domain-cont ( 492) 1530 213.2 2e-54
XP_011507544 (OMIM: 612677) PREDICTED: pyrin and H ( 492) 1530 213.2 2e-54
NP_945147 (OMIM: 612677) pyrin and HIN domain-cont ( 461) 1515 211.3 7.3e-54
XP_011507545 (OMIM: 612677) PREDICTED: pyrin and H ( 457) 1510 210.6 1.1e-53
XP_016855952 (OMIM: 612677) PREDICTED: pyrin and H ( 462) 1510 210.6 1.2e-53
NP_002423 (OMIM: 159553) myeloid cell nuclear diff ( 407) 1285 181.1 7.8e-45
XP_005244987 (OMIM: 612677) PREDICTED: pyrin and H ( 245) 537 83.0 1.6e-15
XP_016858337 (OMIM: 604578) PREDICTED: interferon- ( 343) 529 82.0 4.5e-15
NP_004824 (OMIM: 604578) interferon-inducible prot ( 343) 529 82.0 4.5e-15
XP_005245673 (OMIM: 604578) PREDICTED: interferon- ( 238) 516 80.2 1.1e-14
>>NP_005522 (OMIM: 147586) gamma-interferon-inducible pr (729 aa)
initn: 4720 init1: 4720 opt: 4720 Z-score: 3354.7 bits: 631.3 E(85289): 4e-180
Smith-Waterman score: 4720; 99.7% identity (99.7% similar) in 729 aa overlap (5-733:1-729)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
NP_005 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB3 PAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB3 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB3 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB3 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
660 670 680 690 700 710
730
pF1KB3 PDSSMETSPDFFF
:::::::::::::
NP_005 PDSSMETSPDFFF
720
>>XP_016856639 (OMIM: 147586) PREDICTED: gamma-interfero (520 aa)
initn: 3254 init1: 3254 opt: 3254 Z-score: 2318.8 bits: 439.2 E(85289): 2e-122
Smith-Waterman score: 3254; 99.6% identity (99.6% similar) in 503 aa overlap (1-503:1-503)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
XP_016 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 PAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
:::::::::::::::::::::::
XP_016 PAESHPHTPQMPPSTPSSSFLTTESFCCSESSGSKADSST
490 500 510 520
>>XP_005245184 (OMIM: 147586) PREDICTED: gamma-interfero (789 aa)
initn: 3254 init1: 3254 opt: 3254 Z-score: 2315.9 bits: 439.2 E(85289): 2.9e-122
Smith-Waterman score: 4460; 92.4% identity (92.4% similar) in 765 aa overlap (1-709:1-765)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
XP_005 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
430 440 450 460 470 480
490 500
pF1KB3 PAESHPHTPQMPPSTPSSSFLTT-------------------------------------
:::::::::::::::::::::::
XP_005 PAESHPHTPQMPPSTPSSSFLTTKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIGPAES
490 500 510 520 530 540
510 520 530 540
pF1KB3 -------------------LKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQ
:::::::::::::::::::::::::::::::::::::::::
XP_005 HPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQ
550 560 570 580 590 600
550 560 570 580 590 600
pF1KB3 KKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNAD
610 620 630 640 650 660
610 620 630 640 650 660
pF1KB3 RNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEV
670 680 690 700 710 720
670 680 690 700 710 720
pF1KB3 VVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILNPDSS
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILNPDSS
730 740 750 760 770 780
730
pF1KB3 METSPDFFF
XP_005 METSPDFFF
>>XP_016856638 (OMIM: 147586) PREDICTED: gamma-interfero (677 aa)
initn: 2868 init1: 2868 opt: 2868 Z-score: 2043.6 bits: 388.6 E(85289): 4.3e-107
Smith-Waterman score: 4235; 92.1% identity (92.1% similar) in 733 aa overlap (1-733:1-677)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
XP_016 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
:::::::::::::::::::::::::::
XP_016 ASTTFPESHLRTPQMPPTTPSSSFFTK---------------------------------
430 440
490 500 510 520 530 540
pF1KB3 PAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
:::::::::::::::::::::::::::::::::::::
XP_016 -----------------------LKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
450 460 470 480
550 560 570 580 590 600
pF1KB3 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
490 500 510 520 530 540
610 620 630 640 650 660
pF1KB3 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
550 560 570 580 590 600
670 680 690 700 710 720
pF1KB3 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
610 620 630 640 650 660
730
pF1KB3 PDSSMETSPDFFF
:::::::::::::
XP_016 PDSSMETSPDFFF
670
>>XP_006711353 (OMIM: 147586) PREDICTED: gamma-interfero (677 aa)
initn: 2868 init1: 2868 opt: 2868 Z-score: 2043.6 bits: 388.6 E(85289): 4.3e-107
Smith-Waterman score: 4235; 92.1% identity (92.1% similar) in 733 aa overlap (1-733:1-677)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
XP_006 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
:::::::::::::::::::::::::::
XP_006 ASTTFPESHLRTPQMPPTTPSSSFFTK---------------------------------
430 440
490 500 510 520 530 540
pF1KB3 PAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
:::::::::::::::::::::::::::::::::::::
XP_006 -----------------------LKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYE
450 460 470 480
550 560 570 580 590 600
pF1KB3 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PKEQKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVAD
490 500 510 520 530 540
610 620 630 640 650 660
pF1KB3 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTG
550 560 570 580 590 600
670 680 690 700 710 720
pF1KB3 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILN
610 620 630 640 650 660
730
pF1KB3 PDSSMETSPDFFF
:::::::::::::
XP_006 PDSSMETSPDFFF
670
>>NP_001193496 (OMIM: 147586) gamma-interferon-inducible (729 aa)
initn: 2598 init1: 2598 opt: 2777 Z-score: 1978.6 bits: 376.7 E(85289): 1.8e-103
Smith-Waterman score: 4115; 85.5% identity (85.5% similar) in 785 aa overlap (5-733:1-729)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRKKEVDATSPAPSTSSTVK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 TEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAP
:::::::::::
NP_001 TEGAEATPGAQ-------------------------------------------------
120
190 200 210 220 230 240
pF1KB3 PNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -------NPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQ
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB3 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIIN
190 200 210 220 230 240
310 320 330 340 350 360
pF1KB3 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPC
250 260 270 280 290 300
370 380 390 400 410 420
pF1KB3 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPSE
:::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :::
NP_001 EEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSE
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB3 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIG
370 380 390 400 410 420
490 500
pF1KB3 PAESHPHTPQMPPSTPSSSFLTT-------------------------------------
:::::::::::::::::::::::
NP_001 PAESHPHTPQMPPSTPSSSFLTTKSEDTISKMNDFMRMQILKEGSHFPGPFMTSIGPAES
430 440 450 460 470 480
510 520 530 540
pF1KB3 -------------------LKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQ
:::::::::::::::::::::::::::::::::::::::::
NP_001 HPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 KKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNAD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 RNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQDNTGKMEV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 VVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILNPDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNKKDILNPDSS
670 680 690 700 710 720
730
pF1KB3 METSPDFFF
:::::::::
NP_001 METSPDFFF
>>NP_945146 (OMIM: 612677) pyrin and HIN domain-containi (483 aa)
initn: 1495 init1: 1495 opt: 1981 Z-score: 1417.7 bits: 272.3 E(85289): 3.2e-72
Smith-Waterman score: 1981; 65.2% identity (83.7% similar) in 486 aa overlap (5-489:1-483)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
:...::.::::::::::::::::.:::::::::::: ::.::::::::::::::::
NP_945 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRK-KEVDATSPAPSTSSTV
:::::::::..:..:::: :::::::.::::::: :.: : ::: ..:: . :. .
NP_945 PGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 KTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSA
..::: : : ::::: ..:..: : ::.:.:::.: :::. :::::::: :.:: ::
NP_945 TAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 PPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVAT
:::.::::. : .:. ..: .:.... :.:. ::..:: :.::. : :.. ::::::::
NP_945 PPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVAT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 QTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKII
::::::::::: .::.:: :.:::::.: . .::::::: :.::::::.::::::. ::
NP_945 QTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDII
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 NRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIP
:::. ::.:::::.:: ::::.:::: : ::.::::::::: :.: ::: :.:::::
NP_945 RRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 CEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPS
::.::::.::::::::...::::.:::::::::.:.:: :..: .:: ::::::: :.::
NP_945 CEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 EASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSI
:::::.:::::.:::::::::::: ::::.: . ... ..: : .: ..:
NP_945 EASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRIT---SPTVAPPLSSD
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 GPAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVY
.. :: .:
NP_945 TSTNRHPAVP
480
>>NP_945148 (OMIM: 612677) pyrin and HIN domain-containi (452 aa)
initn: 1987 init1: 1484 opt: 1966 Z-score: 1407.5 bits: 270.4 E(85289): 1.2e-71
Smith-Waterman score: 1966; 69.0% identity (86.6% similar) in 448 aa overlap (5-451:1-448)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
:...::.::::::::::::::::.:::::::::::: ::.::::::::::::::::
NP_945 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRK-KEVDATSPAPSTSSTV
:::::::::..:..:::: :::::::.::::::: :.: : ::: ..:: . :. .
NP_945 PGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 KTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSA
..::: : : ::::: ..:..: : ::.:.:::.: :::. :::::::: :.:: ::
NP_945 TAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 PPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVAT
:::.::::. : .:. ..: .:.... :.:. ::..:: :.::. : :.. ::::::::
NP_945 PPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVAT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 QTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKII
::::::::::: .::.:: :.:::::.: . .::::::: :.::::::.::::::. ::
NP_945 QTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDII
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 NRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIP
:::. ::.:::::.:: ::::.:::: : ::.::::::::: :.: ::: :.:::::
NP_945 RRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIP
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 CEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQSQLPNPS
::.::::.::::::::...::::.:::::::::.:.:: :..: .:: ::::::: :.::
NP_945 CEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPS
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 EASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSHFPGPFMTSI
:::::.:::::.:::::::::::: ::: ..:
NP_945 EASTTLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK
420 430 440 450
480 490 500 510 520 530
pF1KB3 GPAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVY
>>NP_689714 (OMIM: 612677) pyrin and HIN domain-containi (492 aa)
initn: 1950 init1: 1495 opt: 1530 Z-score: 1098.1 bits: 213.2 E(85289): 2e-54
Smith-Waterman score: 1953; 64.0% identity (82.2% similar) in 495 aa overlap (5-489:1-492)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
:...::.::::::::::::::::.:::::::::::: ::.::::::::::::::::
NP_689 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKV---------KGPALSRKRK-KEVDATS
:::::::::..:..:::: :::::::.::::: :: :.: : ::: ..
NP_689 PGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPAT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 PAPSTSSTVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRS
:: . :. . ..::: : : ::::: ..:..: : ::.:.:::.: :::. :::::::
NP_689 PACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 PSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKK
: :.:: :::::.::::. : .:. ..: .:.... :.:. ::..:: :.::. : :..
NP_689 PPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 IMFHATVATQTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQ
::::::::::::::::::: .::.:: :.:::::.: . .::::::: :.::::::.:
NP_689 RMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 TFEVPNKIINRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVV
:::::. :: :::. ::.:::::.:: ::::.:::: : ::.::::::::: :.: ::
NP_689 TFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVV
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 GTGQCHNIPCEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQ
: :.:::::::.::::.::::::::...::::.:::::::::.:.:: :..: .:: :::
NP_689 GKGECHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQ
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 EQSQLPNPSEASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSH
:::: :.:::::::.:::::.:::::::::::: ::::.: . ... ..: :
NP_689 EQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRIT---SP
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 FPGPFMTSIGPAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMV
.: ..: .. :: .:
NP_689 TVAPPLSSDTSTNRHPAVP
480 490
>>XP_011507544 (OMIM: 612677) PREDICTED: pyrin and HIN d (492 aa)
initn: 1950 init1: 1495 opt: 1530 Z-score: 1098.1 bits: 213.2 E(85289): 2e-54
Smith-Waterman score: 1953; 64.0% identity (82.2% similar) in 495 aa overlap (5-489:1-492)
10 20 30 40 50 60
pF1KB3 MSVKMGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKF
:...::.::::::::::::::::.:::::::::::: ::.::::::::::::::::
XP_011 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKF
10 20 30 40 50
70 80 90 100 110
pF1KB3 RGDAGLGKLIKIFEDIPTLEDLAETLKKEKLKV---------KGPALSRKRK-KEVDATS
:::::::::..:..:::: :::::::.::::: :: :.: : ::: ..
XP_011 PGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPAT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 PAPSTSSTVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRS
:: . :. . ..::: : : ::::: ..:..: : ::.:.:::.: :::. :::::::
XP_011 PACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB3 PSPKTSLSAPPNSSSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKK
: :.:: :::::.::::. : .:. ..: .:.... :.:. ::..:: :.::. : :..
XP_011 PPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB3 IMFHATVATQTQFFHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQ
::::::::::::::::::: .::.:: :.:::::.: . .::::::: :.::::::.:
XP_011 RMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB3 TFEVPNKIINRAKETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVV
:::::. :: :::. ::.:::::.:: ::::.:::: : ::.::::::::: :.: ::
XP_011 TFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVV
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB3 GTGQCHNIPCEEGDKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQ
: :.:::::::.::::.::::::::...::::.:::::::::.:.:: :..: .:: :::
XP_011 GKGECHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQ
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB3 EQSQLPNPSEASTTFPESHLRTPQMPPTTPSSSFFTKKSEDTISKMNDFMRMQILKEGSH
:::: :.:::::::.:::::.:::::::::::: ::::.: . ... ..: :
XP_011 EQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRIT---SP
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB3 FPGPFMTSIGPAESHPHTPQMPPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMV
.: ..: .. :: .:
XP_011 TVAPPLSSDTSTNRHPAVP
480 490
733 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:01:00 2016 done: Thu Nov 3 21:01:02 2016
Total Scan time: 9.470 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]