FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3427, 425 aa
  1>>>pF1KB3427 425 - 425 aa - 425 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5199+/-0.000856; mu= 15.6652+/- 0.051
 mean_var=57.9016+/-11.799, 0's: 0 Z-trim(104.7): 25  B-trim: 6 in 1/51
 Lambda= 0.168550
 statistics sampled from 8011 (8017) to 8011 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.246), width:  16
 Scan time:  2.630

The best scores are:                                      opt bits E(32554)
CCDS46714.1 ADSL gene_id:158|Hs108|chr22           ( 425) 2824 695.1 3.4e-200
CCDS14001.1 ADSL gene_id:158|Hs108|chr22           ( 484) 2645 651.6 4.8e-187


>>CCDS46714.1 ADSL gene_id:158|Hs108|chr22                (425 aa)
 initn: 2824 init1: 2824 opt: 2824  Z-score: 3707.7  bits: 695.1 E(32554): 3.4e-200
Smith-Waterman score: 2824; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425)

               10        20        30        40        50        60
pF1KB3 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQVQRFLEEEVYPLLKPYESVMKVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQVQRFLEEEVYPLLKPYESVMKVK
              370       380       390       400       410       420

            
pF1KB3 AELCL
       :::::
CCDS46 AELCL
            

>>CCDS14001.1 ADSL gene_id:158|Hs108|chr22                (484 aa)
 initn: 2643 init1: 2643 opt: 2645  Z-score: 3471.5  bits: 651.6 E(32554): 4.8e-187
Smith-Waterman score: 2645; 96.2% identity (97.4% similar) in 418 aa overlap (1-418:1-415)

               10        20        30        40        50        60
pF1KB3 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAAGGDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QIQEMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QTYTRKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEKQQIGSSAMPYKRNPMR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQVQRFLEEEVYPLLKPYESVMKVK
       :::::::::::::::::::::::::::::::::::::     .:..  : .   ::.:  
CCDS14 GLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQD---CHEKIRVLSQQAASVVKQE
              370       380       390          400       410       

                                                                   
pF1KB3 AELCL                                                       
                                                                   
CCDS14 GGDNDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRASQQVQRFLEEEVYPLLKPYESVMK
       420       430       440       450       460       470       




425 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:23:28 2016 done: Fri Nov  4 02:23:29 2016
 Total Scan time:  2.630 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]