Result of FASTA (omim) for
pF1KB3343
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3343, 897 aa
1>>>pF1KB3343 897 - 897 aa - 897 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.0304+/-0.000461; mu= -12.8605+/- 0.029
mean_var=585.8986+/-124.245, 0's: 0 Z-trim(123.6): 84 B-trim: 830 in 1/60
Lambda= 0.052986
statistics sampled from 43633 (43742) to 43633 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.513), width: 16
Scan time: 14.290
The best scores are: opt bits E(85289)
NP_000386 (OMIM: 138981,614370) cytokine receptor ( 897) 6304 497.5 1.2e-139
XP_005261397 (OMIM: 138981,614370) PREDICTED: cyto ( 903) 6282 495.8 3.8e-139
XP_011528206 (OMIM: 138981,614370) PREDICTED: cyto ( 909) 3248 263.9 2.5e-69
XP_011528205 (OMIM: 138981,614370) PREDICTED: cyto ( 915) 3248 263.9 2.5e-69
XP_011528207 (OMIM: 138981,614370) PREDICTED: cyto ( 529) 3034 247.3 1.4e-64
>>NP_000386 (OMIM: 138981,614370) cytokine receptor comm (897 aa)
initn: 6304 init1: 6304 opt: 6304 Z-score: 2628.3 bits: 497.5 E(85289): 1.2e-139
Smith-Waterman score: 6304; 100.0% identity (100.0% similar) in 897 aa overlap (1-897:1-897)
10 20 30 40 50 60
pF1KB3 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 YNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKWEEKIPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKWEEKIPN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEVSPLTIE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 DPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYLGPPHSR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEVERRPSQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 PNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEGRSPRSP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLSLRSKPS
790 800 810 820 830 840
850 860 870 880 890
pF1KB3 SPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGEVC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPGEVC
850 860 870 880 890
>>XP_005261397 (OMIM: 138981,614370) PREDICTED: cytokine (903 aa)
initn: 6290 init1: 4308 opt: 6282 Z-score: 2619.2 bits: 495.8 E(85289): 3.8e-139
Smith-Waterman score: 6282; 99.3% identity (99.3% similar) in 903 aa overlap (1-897:1-903)
10 20 30 40 50 60
pF1KB3 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAG------EEECSPVLR
::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_005 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLR
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB3 RTSRTGYNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RTSRTGYNGIWSEWSEARSWDTESVLPMWVLALIVIFLTIAVLLALRFCGIYGYRLRRKW
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB3 EEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVGFGDSEV
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB3 SPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFDFNGPYL
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB3 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGPGQAVEV
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB3 ERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSS
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB3 ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVELPPIEG
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGLGPGPLS
790 800 810 820 830 840
840 850 860 870 880 890
pF1KB3 LRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPWEVNKPG
850 860 870 880 890 900
pF1KB3 EVC
:::
XP_005 EVC
>>XP_011528206 (OMIM: 138981,614370) PREDICTED: cytokine (909 aa)
initn: 6290 init1: 3248 opt: 3248 Z-score: 1365.7 bits: 263.9 E(85289): 2.5e-69
Smith-Waterman score: 6270; 98.7% identity (98.7% similar) in 909 aa overlap (1-897:1-909)
10 20 30 40 50 60
pF1KB3 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGEEECSPVLREGLGSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSYSLRWET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTG
370 380 390 400 410 420
430 440 450 460
pF1KB3 YNGIWSEWSEARSWDTES------------VLPMWVLALIVIFLTIAVLLALRFCGIYGY
:::::::::::::::::: ::::::::::::::::::::::::::::::
XP_011 YNGIWSEWSEARSWDTESDADIPLSPRLLEVLPMWVLALIVIFLTIAVLLALRFCGIYGY
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB3 RLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELEGVFPVG
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB3 FGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEKQASSFD
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB3 FNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPLAQAMGP
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB3 GQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDTEDPGVA
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB3 SGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSGFEGYVE
730 740 750 760 770 780
770 780 790 800 810 820
pF1KB3 LPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDYCFLPGL
790 800 810 820 830 840
830 840 850 860 870 880
pF1KB3 GPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDYLSLPPW
850 860 870 880 890 900
890
pF1KB3 EVNKPGEVC
:::::::::
XP_011 EVNKPGEVC
>>XP_011528205 (OMIM: 138981,614370) PREDICTED: cytokine (915 aa)
initn: 6276 init1: 3248 opt: 3248 Z-score: 1365.7 bits: 263.9 E(85289): 2.5e-69
Smith-Waterman score: 6248; 98.0% identity (98.0% similar) in 915 aa overlap (1-897:1-915)
10 20 30 40 50 60
pF1KB3 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAG------EEECSPVLR
::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_011 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLR
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
370 380 390 400 410 420
420 430 440 450 460
pF1KB3 RTSRTGYNGIWSEWSEARSWDTES------------VLPMWVLALIVIFLTIAVLLALRF
:::::::::::::::::::::::: ::::::::::::::::::::::::
XP_011 RTSRTGYNGIWSEWSEARSWDTESDADIPLSPRLLEVLPMWVLALIVIFLTIAVLLALRF
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB3 CGIYGYRLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CGIYGYRLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELE
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB3 GVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEK
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB3 QASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLCLPAGGQVQLVPL
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB3 AQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQAMGPGQAVEVERRPSQGAAGSPSLESGGGPAPPALGPRVGGQDQKDSPVAIPMSSGDT
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB3 EDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDPGVASGYVSSADLVFTPNSGASSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGPVKSG
730 740 750 760 770 780
770 780 790 800 810 820
pF1KB3 FEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEGYVELPPIEGRSPRSPRNNPVPPEAKSPVLNPGERPADVSPTSPQPEGLLVLQQVGDY
790 800 810 820 830 840
830 840 850 860 870 880
pF1KB3 CFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CFLPGLGPGPLSLRSKPSSPGPGPEIKNLDQAFQVKKPPGQAVPQVPVIQLFKALKQQDY
850 860 870 880 890 900
890
pF1KB3 LSLPPWEVNKPGEVC
:::::::::::::::
XP_011 LSLPPWEVNKPGEVC
910
>>XP_011528207 (OMIM: 138981,614370) PREDICTED: cytokine (529 aa)
initn: 3366 init1: 1996 opt: 3034 Z-score: 1280.2 bits: 247.3 E(85289): 1.4e-64
Smith-Waterman score: 3339; 92.7% identity (93.8% similar) in 531 aa overlap (1-513:1-525)
10 20 30 40 50 60
pF1KB3 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVLAQGLLSMALLALCWERSLAGAEETIPLQTLRCYNDYTSHITCRWADTQDAQRLVNVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDVDYFSFQPDRPLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRLTVTLTQHVQPPEPRDLQISTDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG
190 200 210 220 230 240
250 260 270 280 290
pF1KB3 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAG------EEECSPVLR
::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_011 DEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLR
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB3 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKSSVNIQMAPPSLNVTKDGDSY
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB3 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRV
370 380 390 400 410 420
420 430 440 450 460
pF1KB3 RTSRTGYNGIWSEWSEARSWDTES------------VLPMWVLALIVIFLTIAVLLALRF
:::::::::::::::::::::::: ::::::::::::::::::::::::
XP_011 RTSRTGYNGIWSEWSEARSWDTESDADIPLSPRLLEVLPMWVLALIVIFLTIAVLLALRF
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB3 CGIYGYRLRRKWEEKIPNPSKSHLFQNGSAELWPPGSMSAFTSGSPPHQGPWGSRFPELE
::::::::::::::::::::::::::. : . . . . :.::
XP_011 CGIYGYRLRRKWEEKIPNPSKSHLFQG------VPCRIRGQRGVTSHHRGPQACL
490 500 510 520
530 540 550 560 570 580
pF1KB3 GVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQPPSPQPGPPAASHTPEK
897 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:57:59 2016 done: Thu Nov 3 12:58:01 2016
Total Scan time: 14.290 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]