Result of FASTA (ccds) for
pF1KB3288
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3288, 744 aa
1>>>pF1KB3288 744 - 744 aa - 744 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.4204+/-0.00138; mu= 0.2501+/- 0.085
mean_var=686.7062+/-142.782, 0's: 0 Z-trim(115.3): 238 B-trim: 411 in 1/53
Lambda= 0.048943
statistics sampled from 15655 (15890) to 15655 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.736), E-opt: 0.2 (0.488), width: 16
Scan time: 4.930
The best scores are: opt bits E(32554)
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 ( 744) 5593 410.5 4.8e-114
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 ( 703) 2644 202.3 2.2e-51
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 ( 638) 2624 200.8 5.6e-51
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 ( 680) 1942 152.7 1.8e-36
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1631 131.3 1.3e-29
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 1631 131.3 1.3e-29
CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685) 1629 131.1 1.4e-29
CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691) 1629 131.1 1.4e-29
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690) 1613 130.0 3e-29
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767) 1613 130.0 3.1e-29
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806) 1613 130.1 3.1e-29
CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466) 1577 127.4 1.6e-28
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6 (1650) 1534 124.4 1.4e-27
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19 (1745) 1520 123.5 2.9e-27
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690) 1485 121.0 1.6e-26
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418) 1476 120.2 2.2e-26
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487) 1476 120.3 2.3e-26
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669) 1469 119.8 3.4e-26
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499) 1462 119.3 4.5e-26
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670) 1414 116.0 5e-25
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9 (1860) 1399 115.0 1.1e-24
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626) 1392 114.4 1.5e-24
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1 (1604) 1363 112.3 6e-24
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944) 1362 112.6 8.8e-24
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 ( 678) 1321 108.8 2.9e-23
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707) 1331 110.1 3e-23
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 ( 921) 1321 109.0 3.4e-23
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1 (1714) 1322 109.5 4.6e-23
CCDS76649.1 COL4A1 gene_id:1282|Hs108|chr13 ( 519) 1308 107.7 4.7e-23
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690) 1315 109.0 6.4e-23
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691) 1315 109.0 6.4e-23
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633) 1312 108.7 7.3e-23
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666) 1312 108.7 7.4e-23
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712) 1299 107.8 1.4e-22
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10 ( 686) 1259 104.4 6e-22
CCDS44427.2 COL13A1 gene_id:1305|Hs108|chr10 ( 645) 1258 104.3 6.1e-22
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10 ( 695) 1249 103.7 9.9e-22
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10 ( 668) 1246 103.5 1.1e-21
CCDS44428.2 COL13A1 gene_id:1305|Hs108|chr10 ( 610) 1223 101.8 3.3e-21
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4 ( 645) 1218 101.5 4.3e-21
CCDS44419.1 COL13A1 gene_id:1305|Hs108|chr10 ( 717) 1198 100.2 1.2e-20
CCDS4970.1 COL19A1 gene_id:1310|Hs108|chr6 (1142) 1175 98.8 4.9e-20
CCDS43553.1 COL28A1 gene_id:340267|Hs108|chr7 (1125) 1159 97.7 1.1e-19
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 ( 689) 1124 94.9 4.5e-19
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 ( 684) 1101 93.3 1.4e-18
CCDS55025.1 COL21A1 gene_id:81578|Hs108|chr6 ( 957) 1076 91.7 5.6e-18
CCDS83099.1 COL21A1 gene_id:81578|Hs108|chr6 ( 954) 1069 91.2 7.9e-18
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21 (1339) 1006 87.0 2.1e-16
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21 (1519) 1006 87.1 2.2e-16
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21 (1754) 1006 87.2 2.4e-16
>>CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 (744 aa)
initn: 5593 init1: 5593 opt: 5593 Z-score: 2161.0 bits: 410.5 E(32554): 4.8e-114
Smith-Waterman score: 5593; 100.0% identity (100.0% similar) in 744 aa overlap (1-744:1-744)
10 20 30 40 50 60
pF1KB3 MAVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MAVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 MPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 GPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 GPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 GDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 GDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 IGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 DRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 DRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 PKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 HGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 HGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 YGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 YGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 YYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 YYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
670 680 690 700 710 720
730 740
pF1KB3 EQAAGLYAGQYVHSSFSGYLLYPM
::::::::::::::::::::::::
CCDS29 EQAAGLYAGQYVHSSFSGYLLYPM
730 740
>>CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 (703 aa)
initn: 5240 init1: 2003 opt: 2644 Z-score: 1035.9 bits: 202.3 E(32554): 2.2e-51
Smith-Waterman score: 2644; 57.2% identity (71.1% similar) in 671 aa overlap (88-743:42-702)
60 70 80 90 100 110
pF1KB3 VPHMPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGK--EIPLA-
.:.. .: .: .: ::. :.::
CCDS40 LLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGP-VGPPFREGKGQYLEMPLPL
20 30 40 50 60 70
120 130 140 150 160
pF1KB3 ---SLRGEQGPRGEPGPRGPPGPPGLPGH---GIPGIKGKPGPQGYPG---VGKPGMPGM
.:.:: :: :.:::::::::::.::. : ::..:.::: : :: .:: : ::.
CCDS40 LPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGL
80 90 100 110 120 130
170 180 190 200 210 220
pF1KB3 PGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDR
::: : :.:: .:: : .:. : : ::: : ::: :. ::::. :.:: :: .:.
CCDS40 PGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEP
140 150 160 170 180 190
230 240 250 260 270 280
pF1KB3 GPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP
::.: ::: : :: :::.: :.:: ::. : : :::: : :.::::. :.:: :
CCDS40 GPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGD
200 210 220 230 240 250
290 300 310 320 330 340
pF1KB3 LGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPP
:. : :: :::.: :. : .::::. :.: :: :.:: : :.::: :: :::
CCDS40 KGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE---PGTRGPP
260 270 280 290 300
350 360 370 380 390 400
pF1KB3 GL--P-GIGKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMG
:: : : : ::.:::::::: .:::: :: ::: : : :: :: : : ::.:: :
CCDS40 GLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAG
310 320 330 340 350 360
410 420 430 440 450 460
pF1KB3 PPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKG
:: : ::::::.: :: : :: .:. : .:. :::: :: : :: .: ::: ::::
CCDS40 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKG
370 380 390 400 410 420
470 480 490 500 510 520
pF1KB3 EAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPG
: : : :: ::: : :: ::. :.::. ::.:: ::::. ::.::::: :.:: :::::
CCDS40 EPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG
430 440 450 460 470 480
530 540 550 560 570 580
pF1KB3 LPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQG
:::::: :.::.:: :::: ::. : : : ::::::::::: :... : :
CCDS40 LPGPPGEGRAGEPGTAGPTGPPGVPGS--P-GITGPPGPPGPPGPPGAPGAFDETGIA-G
490 500 510 520 530 540
590 600 610 620 630 640
pF1KB3 EYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNG
.::. : :..:. .. . : . :. ::::: ::.::: : ::::.. ::::
CCDS40 LHLPN-G-GVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNG
550 560 570 580 590 600
650 660 670 680 690 700
pF1KB3 RQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASG
...::: :::::: : :::::::::: :: ::::::.::: :. :::::::::.::::::
CCDS40 HSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASG
610 620 630 640 650 660
710 720 730 740
pF1KB3 SAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM
.::: :::.:.:..::::.:: :::. .:.::::::.:: :
CCDS40 GAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
670 680 690 700
>>CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 (638 aa)
initn: 5232 init1: 1995 opt: 2624 Z-score: 1028.7 bits: 200.8 E(32554): 5.6e-51
Smith-Waterman score: 2624; 58.6% identity (72.1% similar) in 642 aa overlap (111-743:6-637)
90 100 110 120 130 140
pF1KB3 KEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGH
.:. .:.:: :: :.:::::::::::.::.
CCDS72 MPLPLLPM-DLKGEPGPPGKPGPRGPPGPPGFPGK
10 20 30
150 160 170 180 190
pF1KB3 ---GIPGIKGKPGPQGYPG---VGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPG
: ::..:.::: : :: .:: : ::.::: : :.:: .:: : .:. : : ::
CCDS72 PGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPG
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB3 PQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVK
: : ::: :. ::::. :.:: :: .:. ::.: ::: : :: :::.: :.:: ::.
CCDS72 PPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAP
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB3 GPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPG
: : :::: : :.::::. :.:: : :. : :: :::.: :. : .::::. :
CCDS72 GQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB3 IGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGL--P-GIGKPGFPGPKGDRGMGGVPGAL
.: :: :.:: : :.::: :: ::::: : : : ::.:::::::: .:::: :
CCDS72 VGVPGAAGLPGPQGPSGAKGE---PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLL
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB3 GPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEP
: ::: : : :: :: : : ::.:: : :: : ::::::.: :: : :: .:.
CCDS72 GDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQ
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB3 GLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQ
: .:. :::: :: : :: .: ::: ::::: : : :: ::: : :: ::. :.::.
CCDS72 GPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQP
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB3 GLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALG
::.:: ::::. ::.::::: :.:: ::::::::::: :.::.:: :::: ::. :
CCDS72 GLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPG
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB3 PQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGP
: : ::::::::::: :... : : .::. : :..:. .. . : .
CCDS72 ITG-P--PGPPGPPGPPGAPGAFDETGIA-GLHLPN-G-GVEGAVLGKGGKPQFGLGELS
460 470 480 490 500
620 630 640 650 660 670
pF1KB3 AYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKG
:. ::::: ::.::: : ::::.. ::::...::: :::::: : :::::::::: ::
CCDS72 AHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKG
510 520 530 540 550 560
680 690 700 710 720 730
pF1KB3 GNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQY
::::::.::: :. :::::::::.::::::.::: :::.:.:..::::.:: :::. .:
CCDS72 TNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEY
570 580 590 600 610 620
740
pF1KB3 VHSSFSGYLLYPM
.::::::.:: :
CCDS72 IHSSFSGFLLCPT
630
>>CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 (680 aa)
initn: 1884 init1: 1884 opt: 1942 Z-score: 768.2 bits: 152.7 E(32554): 1.8e-36
Smith-Waterman score: 2509; 52.7% identity (67.7% similar) in 706 aa overlap (57-744:4-680)
30 40 50 60 70 80
pF1KB3 AGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPHL
:.: . :.. .:. : . :...: ..
CCDS51 MLPQIPFLLLVSLNLVHG-----VFYAERY-QM
10 20
90 100 110 120 130 140
pF1KB3 PQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGP---PGP---PGLPGH
: .: : . . .: : .: .::::: : ::: :: ::: :: ::.
CCDS51 PTGIKGPLPNTKT-QFFIPYTIKSKGIA-VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGY
30 40 50 60 70 80
150 160 170 180 190
pF1KB3 GIPGIKGKPGPQGYPG---VGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQG
: ::..:.:: : :: :::::.::.::: :: .: : ::..:: :.:::.:
CCDS51 GSPGLQGEPGLPGPPGPSAVGKPGVPGLPGK------PGERGPYGPKGDVGPAGLPGPRG
90 100 110 120 130
200 210 220 230 240 250
pF1KB3 PPGPHGLPGI------GKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAP
:::: :.:: :::: : : :::.: : :: :: :. : ::. :.: :: :
CCDS51 PPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRP
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB3 GVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPG
: .: :: .:: :: : ::::: : .: :: : : : ::: :: :: :: :::::
CCDS51 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGP---PGPQGPPG
200 210 220 230 240 250
320 330 340 350 360
pF1KB3 I--P-GIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGVP
: :::::: : :::::.:: :: : ::. :::: ::.::::.:: ::.:: .:.:
CCDS51 ERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLP
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB3 GALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPK
:. : .::.:: : :: : : :: : :: : ::. :.:::::: : .:: : :: :
CCDS51 GGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAK
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB3 GEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIP
:: : : ::::. :. : : .: :: ::::. : : ::::: : : :: ::
CCDS51 GERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHN
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB3 GDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPG
:. : .: ::::: :: :: : ::.:: ::.:: ::::: ::. :. : :::: ::
CCDS51 GEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPG
440 450 460 470 480 490
550 560 570 580 590 600
pF1KB3 ALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKN
: .:.:::::::::::::: :::: :. :... : :. :..: .
CCDS51 PRGHSGEPGLPGPPGPPGPPGQ-AVMPEGFIKAGQR-PSLS-GTPLVS------ANQGVT
500 510 520 530 540
610 620 630 640 650 660
pF1KB3 GGPAYEMPAFTAELTAPFPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVH
: : . :::. :. .: .:.:. :.:.::: .:.:.:.::::::..::.:::.::::
CCDS51 GMP---VSAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVH
550 560 570 580 590 600
670 680 690 700 710 720
pF1KB3 CKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYA
:: .:::.:.::. ::::::::: ::.::::::::.. : .:.:.::.:. .. :::.
CCDS51 VKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQLPNAESNGLYS
610 620 630 640 650 660
730 740
pF1KB3 GQYVHSSFSGYLLYPM
..::::::::.:. ::
CCDS51 SEYVHSSFSGFLVAPM
670 680
>>CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 1846 init1: 655 opt: 1631 Z-score: 645.1 bits: 131.3 E(32554): 1.3e-29
Smith-Waterman score: 1720; 44.8% identity (52.7% similar) in 697 aa overlap (53-632:836-1530)
30 40 50 60 70 80
pF1KB3 RLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAM--GKEMPHLQYG
: :.. :. : .. : : : . :
CCDS69 TKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKG
810 820 830 840 850 860
90 100 110 120 130
pF1KB3 KE-YPHLPQYMKEIQPAPRMGKEAVP-----KKGKEIPLA----SLRGEQGPRGEPGPRG
: : :: : . : .: . : : :. : . :: ::::: ::::
CCDS69 KLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRG
870 880 890 900 910 920
140 150 160 170 180
pF1KB3 PPGPPGLPGH-------GIPGIKGKPGPQGYPGVGKP-GMPGMPGKPGAMGMPGAKGEIG
: :: :. : :: .: :::: : : : :: ::: : : :: .:: :
CCDS69 ITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETG
930 940 950 960 970 980
190 200 210 220
pF1KB3 QKGEIGPMGIPG---PQGP------------PGPHGLPGIGKPGGPGLPGQPGPKGDRGP
.:. :: : :: :::: ::: : :: . : ::: :. : ::: ::
CCDS69 FQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPG--EQGLPGLAGKEGTKGDPGP
990 1000 1010 1020 1030 1040
230 240 250 260 270
pF1KB3 KGLPG---PQGLRGPKGDKGFGMP-GAPGVKGPPGMHGPPGPVGLPG-------VGKPGV
:::: : :::: ::.:. : :: :.:: : :::::.: :: .: :.
CCDS69 AGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGI
1050 1060 1070 1080 1090 1100
280 290 300 310 320
pF1KB3 TGFPGPQGP---LGKPGAPGEPGPQGPIGVPGVQGPPGIPG----IGKPGQDGI------
: :::::: :. ::::: ::::: : :.::: :.:: .: ::.::
CCDS69 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGE
1110 1120 1130 1140 1150 1160
330 340 350 360 370
pF1KB3 PGQPGFPGGKGEQGLPGLPGP--P-GLPGI-GKPGFPGPKGDRGMGGVPGALGPRG---E
::: : : ::::: :: :: : : :: : : :::.:..:. : : ::::
CCDS69 PGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGP
1170 1180 1190 1200 1210 1220
380 390 400 410 420
pF1KB3 KGPIGAPGIGGPPGEPGL---------PGIPGPMGPPGAIGFPGPKGE-GGI-----VGP
::.: :. ::::: : :: ::: :: :: : ::.: ::: ::
CCDS69 PGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGE
1230 1240 1250 1260 1270 1280
430 440 450 460
pF1KB3 QGPPGPKGEPGLQGFPGKPGFLGE------------VGPPGMRGLPGPIGPKGEAGQKGV
.: :: ::::: : : :: :: .:::: .: :: :::: : :
CCDS69 KGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGF
1290 1300 1310 1320 1330 1340
470 480 490 500 510 520
pF1KB3 PGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGF
:: :: :: :: :. : :::.: .: :: : ::.: :: : :: .: :: :: :
CCDS69 PGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGR
1350 1360 1370 1380 1390 1400
530 540 550 560 570
pF1KB3 PG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGP------PGP---------PGPPGPPAV
: : : :::.::::: : .:::: :: ::: ::: ::: :::.
CCDS69 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP
1410 1420 1430 1440 1450 1460
580 590 600 610 620
pF1KB3 M-PP-TPPPQGEYLPDMGLGIDG----VKPPHAYGAK--KGKNGGPAYEMPAFTAELTAP
: :: : .:. : : : . :: : : .: : . : .:.:
CCDS69 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGP
1470 1480 1490 1500 1510 1520
630 640 650 660 670 680
pF1KB3 FPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPV
:.: :
CCDS69 SGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRT
1530 1540 1550 1560 1570 1580
>--
initn: 2268 init1: 607 opt: 1184 Z-score: 474.6 bits: 99.8 E(32554): 4.1e-20
Smith-Waterman score: 1187; 39.9% identity (53.0% similar) in 589 aa overlap (32-563:287-835)
10 20 30 40 50
pF1KB3 AVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIP---PQMPPQIPQ-YQPLGQQ
: .: : . : . ..:. : .
CCDS69 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE
260 270 280 290 300 310
60 70 80 90 100
pF1KB3 VPHMPLAKDGLAMGKE----------MPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKK
. :: ...: ::: .: .: :. . : . : . . :
CCDS69 AAPMPETSEG--AGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTD--PGA
320 330 340 350 360 370
110 120 130 140 150 160
pF1KB3 GKEIPLASLRGEQGPRGEPGPRGPPGPPG--LPGH----GIPGIKGKPGPQGYPGVGKPG
: ::: .. .. . ..:.: ::: . : :. : .. . : ...:.
CCDS69 GAEIPTST--ADTSNSSNPAP--PPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPS
380 390 400 410 420
170 180 190 200 210
pF1KB3 M--PGMPGKPGAM--GMPGAKGEIGQKGE---IGP-MGIPGPQGPPGPHGLPGIGKPGGP
::::.. .. :. : .:: ::::: : : : : :: :: :: ::: : ::
CCDS69 EIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP--GPPGTM
430 440 450 460 470 480
220 230 240 250
pF1KB3 GLPGQPGPKGDRGPKG---LPGPQGLRGPKGDK-----GFGMPGAPGVKGPP--------
: :: : :.::: : ::: .:: :: : :: : : :::
CCDS69 GPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQA
490 500 510 520 530 540
260 270 280 290 300
pF1KB3 ---------GMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQG
...:: ::.:: .:.:: . :: : : : ::. ::::: :: : :
CCDS69 QAILQQARLALRGPAGPMGL--TGRPGPV---GPPGSGGLKGEPGDVGPQGPRGVQGPPG
550 560 570 580 590 600
310 320 330 340 350 360
pF1KB3 PPGIPGI-GKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGV
: : :: :. :.:: :.:: : ::..:. :: : :: : . : :::.: :
CCDS69 PAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG--HRGDPGPSGP---PGP
610 620 630 640 650
370 380 390 400 410 420
pF1KB3 PGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP
:: : ::. : .: :. ::::: :. :: :::: ::: : ..: .: :::
CCDS69 PGDDGERGDDGEVGPRGL---PGEPGPRGLLGPKGPPGP---PGPPG---VTGMDGQPGP
660 670 680 690 700
430 440 450 460 470 480
pF1KB3 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGP---IGPKGEAGQKGVPGLPGVPGLLGPKGE
::. : :: :: :: . : :: .::::: ::: :: : : :::::.:: :: :.
CCDS69 KGNVGPQGEPGPPG---QQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH
710 720 730 740 750 760
490 500 510 520 530 540
pF1KB3 PGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPP
:: .:::: : :: :: :: : :::.: : : :. : : : : :
CCDS69 PGK------EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKG--TKGEKGEDGFP
770 780 790 800 810
550 560 570 580 590 600
pF1KB3 GKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAK
: : .: .:. : ::::
CCDS69 GFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP
820 830 840 850 860 870
>>CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 1846 init1: 655 opt: 1631 Z-score: 645.1 bits: 131.3 E(32554): 1.3e-29
Smith-Waterman score: 1720; 44.8% identity (52.7% similar) in 697 aa overlap (53-632:836-1530)
30 40 50 60 70 80
pF1KB3 RLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAM--GKEMPHLQYG
: :.. :. : .. : : : . :
CCDS75 TKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKG
810 820 830 840 850 860
90 100 110 120 130
pF1KB3 KE-YPHLPQYMKEIQPAPRMGKEAVP-----KKGKEIPLA----SLRGEQGPRGEPGPRG
: : :: : . : .: . : : :. : . :: ::::: ::::
CCDS75 KLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRG
870 880 890 900 910 920
140 150 160 170 180
pF1KB3 PPGPPGLPGH-------GIPGIKGKPGPQGYPGVGKP-GMPGMPGKPGAMGMPGAKGEIG
: :: :. : :: .: :::: : : : :: ::: : : :: .:: :
CCDS75 ITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETG
930 940 950 960 970 980
190 200 210 220
pF1KB3 QKGEIGPMGIPG---PQGP------------PGPHGLPGIGKPGGPGLPGQPGPKGDRGP
.:. :: : :: :::: ::: : :: . : ::: :. : ::: ::
CCDS75 FQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPG--EQGLPGLAGKEGTKGDPGP
990 1000 1010 1020 1030 1040
230 240 250 260 270
pF1KB3 KGLPG---PQGLRGPKGDKGFGMP-GAPGVKGPPGMHGPPGPVGLPG-------VGKPGV
:::: : :::: ::.:. : :: :.:: : :::::.: :: .: :.
CCDS75 AGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGI
1050 1060 1070 1080 1090 1100
280 290 300 310 320
pF1KB3 TGFPGPQGP---LGKPGAPGEPGPQGPIGVPGVQGPPGIPG----IGKPGQDGI------
: :::::: :. ::::: ::::: : :.::: :.:: .: ::.::
CCDS75 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGE
1110 1120 1130 1140 1150 1160
330 340 350 360 370
pF1KB3 PGQPGFPGGKGEQGLPGLPGP--P-GLPGI-GKPGFPGPKGDRGMGGVPGALGPRG---E
::: : : ::::: :: :: : : :: : : :::.:..:. : : ::::
CCDS75 PGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGP
1170 1180 1190 1200 1210 1220
380 390 400 410 420
pF1KB3 KGPIGAPGIGGPPGEPGL---------PGIPGPMGPPGAIGFPGPKGE-GGI-----VGP
::.: :. ::::: : :: ::: :: :: : ::.: ::: ::
CCDS75 PGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGE
1230 1240 1250 1260 1270 1280
430 440 450 460
pF1KB3 QGPPGPKGEPGLQGFPGKPGFLGE------------VGPPGMRGLPGPIGPKGEAGQKGV
.: :: ::::: : : :: :: .:::: .: :: :::: : :
CCDS75 KGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGF
1290 1300 1310 1320 1330 1340
470 480 490 500 510 520
pF1KB3 PGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGF
:: :: :: :: :. : :::.: .: :: : ::.: :: : :: .: :: :: :
CCDS75 PGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGR
1350 1360 1370 1380 1390 1400
530 540 550 560 570
pF1KB3 PG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGP------PGP---------PGPPGPPAV
: : : :::.::::: : .:::: :: ::: ::: ::: :::.
CCDS75 QGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGP
1410 1420 1430 1440 1450 1460
580 590 600 610 620
pF1KB3 M-PP-TPPPQGEYLPDMGLGIDG----VKPPHAYGAK--KGKNGGPAYEMPAFTAELTAP
: :: : .:. : : : . :: : : .: : . : .:.:
CCDS75 MGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGP
1470 1480 1490 1500 1510 1520
630 640 650 660 670 680
pF1KB3 FPPVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPV
:.: :
CCDS75 SGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRT
1530 1540 1550 1560 1570 1580
>--
initn: 2268 init1: 607 opt: 1184 Z-score: 474.6 bits: 99.8 E(32554): 4.1e-20
Smith-Waterman score: 1187; 39.9% identity (53.0% similar) in 589 aa overlap (32-563:287-835)
10 20 30 40 50
pF1KB3 AVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIP---PQMPPQIPQ-YQPLGQQ
: .: : . : . ..:. : .
CCDS75 PNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTE
260 270 280 290 300 310
60 70 80 90 100
pF1KB3 VPHMPLAKDGLAMGKE----------MPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKK
. :: ...: ::: .: .: :. . : . : . . :
CCDS75 AAPMPETSEG--AGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTD--PGA
320 330 340 350 360 370
110 120 130 140 150 160
pF1KB3 GKEIPLASLRGEQGPRGEPGPRGPPGPPG--LPGH----GIPGIKGKPGPQGYPGVGKPG
: ::: .. .. . ..:.: ::: . : :. : .. . : ...:.
CCDS75 GAEIPTST--ADTSNSSNPAP--PPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPS
380 390 400 410 420
170 180 190 200 210
pF1KB3 M--PGMPGKPGAM--GMPGAKGEIGQKGE---IGP-MGIPGPQGPPGPHGLPGIGKPGGP
::::.. .. :. : .:: ::::: : : : : :: :: :: ::: : ::
CCDS75 EIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP--GPPGTM
430 440 450 460 470 480
220 230 240 250
pF1KB3 GLPGQPGPKGDRGPKG---LPGPQGLRGPKGDK-----GFGMPGAPGVKGPP--------
: :: : :.::: : ::: .:: :: : :: : : :::
CCDS75 GPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQA
490 500 510 520 530 540
260 270 280 290 300
pF1KB3 ---------GMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQG
...:: ::.:: .:.:: . :: : : : ::. ::::: :: : :
CCDS75 QAILQQARLALRGPAGPMGL--TGRPGPV---GPPGSGGLKGEPGDVGPQGPRGVQGPPG
550 560 570 580 590 600
310 320 330 340 350 360
pF1KB3 PPGIPGI-GKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGV
: : :: :. :.:: :.:: : ::..:. :: : :: : . : :::.: :
CCDS75 PAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG--HRGDPGPSGP---PGP
610 620 630 640 650
370 380 390 400 410 420
pF1KB3 PGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP
:: : ::. : .: :. ::::: :. :: :::: ::: : ..: .: :::
CCDS75 PGDDGERGDDGEVGPRGL---PGEPGPRGLLGPKGPPGP---PGPPG---VTGMDGQPGP
660 670 680 690 700
430 440 450 460 470 480
pF1KB3 KGEPGLQGFPGKPGFLGEVGPPGMRGLPGP---IGPKGEAGQKGVPGLPGVPGLLGPKGE
::. : :: :: :: . : :: .::::: ::: :: : : :::::.:: :: :.
CCDS75 KGNVGPQGEPGPPG---QQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH
710 720 730 740 750 760
490 500 510 520 530 540
pF1KB3 PGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPP
:: .:::: : :: :: :: : :::.: : : :. : : : : :
CCDS75 PGK------EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKG--TKGEKGEDGFP
770 780 790 800 810
550 560 570 580 590 600
pF1KB3 GKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAK
: : .: .:. : ::::
CCDS75 GFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP
820 830 840 850 860 870
>>CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685 aa)
initn: 1937 init1: 725 opt: 1629 Z-score: 644.8 bits: 131.1 E(32554): 1.4e-29
Smith-Waterman score: 1766; 46.5% identity (59.7% similar) in 635 aa overlap (32-632:609-1198)
10 20 30 40 50 60
pF1KB3 AVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHM
:. :: .: :. :: . :.:..
CCDS14 GQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEK----
580 590 600 610 620 630
70 80 90 100 110 120
pF1KB3 PLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQG
. .:.: . .: . : : : . ::. . : . : . .. : . : :
CCDS14 --GIQGVAGNPGQPGIPGPKGDPG--QTIT--QPG-KPGLPGNPGRDGDVGLPGDPGLPG
640 650 660 670 680
130 140 150 160 170 180
pF1KB3 PRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGE
: :: : : ::.:: :.:: :::.:.::. : :: :: ::. : : :: :
CCDS14 QPGLPGIPGSKGEPGIPGIGLPG---PPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGF
690 700 710 720 730 740
190 200 210 220 230
pF1KB3 IGQKGEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGP
: ::: : ...::: :::: :. : .: : :.:: ::: : : :::::.: ::
CCDS14 PGPKGEPG-FALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGP
750 760 770 780 790 800
240 250 260 270 280 290
pF1KB3 KGDKG-FGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQGPLGKPG--APGEP
.:. : .: :: ::. :..::::: :.:: .:.::. :.:: .: : :: .:: :
CCDS14 NGQPGPMGPPGLPGI----GVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP
810 820 830 840 850
300 310 320 330 340 350
pF1KB3 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI-GKPG
: .: :.::. :: : :: .:: : : :::: :::.:. : ::::: :: :. :
CCDS14 GERGSPGIPGAPGPIGPPG--SPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG
860 870 880 890 900 910
360 370 380 390 400
pF1KB3 FPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPG--------------EPGLPGIPGP
:: ::: :. : :: :: :::: : ::. :::: :::::::::
CCDS14 VPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGV
920 930 940 950 960 970
410 420 430 440 450
pF1KB3 MGPPGAIGFPGPKGEGGIVG-P--QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGP
:: : :.:: :. :. : : :::::::.::: ::.::. .::::..: :
CCDS14 SGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGL---PGQPGL---IGPPGLKGTIGD
980 990 1000 1010 1020 1030
460 470 480 490 500 510
pF1KB3 IGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGP
.: : : .: :: :::: : : ::.::..: .: ::: . :: ::.:::
CCDS14 MGFPGPQGVEGPPGPSGVPGQ--P-GSPGLPGQKGDKGDPGISS-------IGLPGLPGP
1040 1050 1060 1070 1080
520 530 540 550 560 570
pF1KB3 KGEPGLPGPPGFPGI-GKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVM-P
:::::::: :: ::: :. : :: : :: ::: .::::::: :: :::::: .. :
CCDS14 KGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGA---KGQPGLPGFPGTPGPPGPKGISGP
1090 1100 1110 1120 1130
580 590 600 610 620
pF1KB3 PTPPP-QGEYLPDMGLGIDGVKPPHAYGAKKGKNG--GPAYE-----MPAFTAELTAPFP
: : :: : : : : : . .: :..: ::: . .:.: : :
CCDS14 PGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF----GNPGP
1140 1150 1160 1170 1180 1190
630 640 650 660 670 680
pF1KB3 PVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMY
: : :
CCDS14 P-GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGN
1200 1210 1220 1230 1240 1250
>--
initn: 849 init1: 494 opt: 871 Z-score: 355.5 bits: 77.6 E(32554): 1.8e-13
Smith-Waterman score: 989; 50.8% identity (63.2% similar) in 299 aa overlap (217-514:1199-1458)
190 200 210 220 230 240
pF1KB3 IGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFG
: : ::: : :.:: :: ::::.
CCDS14 PGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGE----
1170 1180 1190 1200 1210 1220
250 260 270 280 290 300
pF1KB3 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV
:: .: ::..::::: : :: . : : :::::: :: :: :::.:: :.::
CCDS14 ----PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGP---PGRPGLPGPEGPPGLPGN
1230 1240 1250 1260 1270
310 320 330 340 350 360
pF1KB3 QGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGG
: : : .::: :: ::.:: ::.:: ::: : :: .::. : ::: :. :
CCDS14 GGIKGEKG--NPGQ---PGLPGLPGLKGDQGPPGLQGNPG-----RPGLNGMKGDPGLPG
1280 1290 1300 1310 1320
370 380 390 400 410 420
pF1KB3 VPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIV-GPQGPP
::: : : ::: :.:: .:: ::::: .:::: :.:::.:.. :. : :::
CCDS14 VPGF--P-GMKGPSGVPGSAGPEGEPGL------IGPPGPPGLPGPSGQSIIIKGDAGPP
1330 1340 1350 1360 1370
430 440 450 460 470 480
pF1KB3 GPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEP
: :.:::.:.:: : : .::::: :: :. :..:.::. :. : : : :
CCDS14 GIPGQPGLKGLPG---------PQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLP
1380 1390 1400 1410 1420
490 500 510 520 530 540
pF1KB3 GIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPG
: :: .::.:::: :. :: :: : ..
CCDS14 GQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYEGFSL
1430 1440 1450 1460 1470 1480
>--
initn: 660 init1: 660 opt: 864 Z-score: 352.8 bits: 77.1 E(32554): 2.5e-13
Smith-Waterman score: 1394; 49.2% identity (60.3% similar) in 451 aa overlap (144-571:42-462)
120 130 140 150 160 170
pF1KB3 ASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMG
::::. : .:.::. : ::.:: :: :
CCDS14 LFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGL--EGHPGLPGFPGPEG
20 30 40 50 60
180 190 200 210 220 230
pF1KB3 MPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP
:: .: :::. : : :::.: :: ::::. :: :::::.:: : ::.:.::
CCDS14 PPGPRG---QKGDDGIPGPPGPKGIRGPPGLPGF--PGTPGLPGMPGHDGAPGPQGIPG-
70 80 90 100 110 120
240 250 260 270 280
pF1KB3 QGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGV-GKPG---VTGFPGPQGPLGKP
: ::..:: ::.:: ::..::::: :.::. :.:: ....:::.: : :
CCDS14 --CNGTKGERGF--PGSPGF---PGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYP
130 140 150 160 170
290 300 310 320 330 340
pF1KB3 GAPGEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPG-----FPGGKGEQGLPGLPG
: :: : :: :.:: :::: ::. : :: :.:: : : : :::.: :: :
CCDS14 GPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
180 190 200 210 220 230
350 360 370 380 390
pF1KB3 PPGLPG-IGKPGFPGP----KGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPG-LPGI
::: :: :.. : :::.:. :: ..:: : ::: :::: :: :
CCDS14 PPGPPGQISEQKRPIDVEFQKGDQGL---PG------DRGPPGPPGIRGPPGPPGGEKGE
240 250 260 270 280
400 410 420 430 440 450
pF1KB3 PGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGL--P
: .: :: : :: ::.: : : :: : :: : :. : :..:::: :: :
CCDS14 KGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIP
290 300 310 320 330 340
460 470 480 490 500 510
pF1KB3 GPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIP
: : :.:: ::::.:: : .: ::: : :: :::: .: : ::::.:
CCDS14 RP-GTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPP----GPPGFP
350 360 370 380 390 400
520 530 540 550 560 570
pF1KB3 GPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGP-----PGPPGPPGP
: .:. : ::::. : ::. : : :: :: :: : : .: ::::::::
CCDS14 GERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAG-PHIPPSDEICEPGPPGPPGS
410 420 430 440 450 460
580 590 600 610 620 630
pF1KB3 PAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVG
:
CCDS14 PGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAG
470 480 490 500 510 520
>>CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691 aa)
initn: 1937 init1: 725 opt: 1629 Z-score: 644.7 bits: 131.1 E(32554): 1.4e-29
Smith-Waterman score: 1766; 46.5% identity (59.7% similar) in 635 aa overlap (32-632:609-1198)
10 20 30 40 50 60
pF1KB3 AVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHM
:. :: .: :. :: . :.:..
CCDS35 GQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEK----
580 590 600 610 620 630
70 80 90 100 110 120
pF1KB3 PLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQG
. .:.: . .: . : : : . ::. . : . : . .. : . : :
CCDS35 --GIQGVAGNPGQPGIPGPKGDPG--QTIT--QPG-KPGLPGNPGRDGDVGLPGDPGLPG
640 650 660 670 680
130 140 150 160 170 180
pF1KB3 PRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGV-GKPGMPGMPGKPGAMGMPGAKGE
: :: : : ::.:: :.:: :::.:.::. : :: :: ::. : : :: :
CCDS35 QPGLPGIPGSKGEPGIPGIGLPG---PPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGF
690 700 710 720 730 740
190 200 210 220 230
pF1KB3 IGQKGEIGPMGIPGPQGPPGPHGLPG-IGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGP
: ::: : ...::: :::: :. : .: : :.:: ::: : : :::::.: ::
CCDS35 PGPKGEPG-FALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGP
750 760 770 780 790 800
240 250 260 270 280 290
pF1KB3 KGDKG-FGMPGAPGVKGPPGMHGPPGPVGLPG-VGKPGVTGFPGPQGPLGKPG--APGEP
.:. : .: :: ::. :..::::: :.:: .:.::. :.:: .: : :: .:: :
CCDS35 NGQPGPMGPPGLPGI----GVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP
810 820 830 840 850
300 310 320 330 340 350
pF1KB3 GPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI-GKPG
: .: :.::. :: : :: .:: : : :::: :::.:. : ::::: :: :. :
CCDS35 GERGSPGIPGAPGPIGPPG--SPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSG
860 870 880 890 900 910
360 370 380 390 400
pF1KB3 FPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGPPG--------------EPGLPGIPGP
:: ::: :. : :: :: :::: : ::. :::: :::::::::
CCDS35 VPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPGV
920 930 940 950 960 970
410 420 430 440 450
pF1KB3 MGPPGAIGFPGPKGEGGIVG-P--QGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGP
:: : :.:: :. :. : : :::::::.::: ::.::. .::::..: :
CCDS35 SGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGL---PGQPGL---IGPPGLKGTIGD
980 990 1000 1010 1020 1030
460 470 480 490 500 510
pF1KB3 IGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGP
.: : : .: :: :::: : : ::.::..: .: ::: . :: ::.:::
CCDS35 MGFPGPQGVEGPPGPSGVPGQ--P-GSPGLPGQKGDKGDPGISS-------IGLPGLPGP
1040 1050 1060 1070 1080
520 530 540 550 560 570
pF1KB3 KGEPGLPGPPGFPGI-GKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVM-P
:::::::: :: ::: :. : :: : :: ::: .::::::: :: :::::: .. :
CCDS35 KGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGA---KGQPGLPGFPGTPGPPGPKGISGP
1090 1100 1110 1120 1130
580 590 600 610 620
pF1KB3 PTPPP-QGEYLPDMGLGIDGVKPPHAYGAKKGKNG--GPAYE-----MPAFTAELTAPFP
: : :: : : : : : . .: :..: ::: . .:.: : :
CCDS35 PGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGF----GNPGP
1140 1150 1160 1170 1180 1190
630 640 650 660 670 680
pF1KB3 PVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPVMY
: : :
CCDS35 P-GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGN
1200 1210 1220 1230 1240 1250
>--
initn: 1338 init1: 527 opt: 894 Z-score: 364.3 bits: 79.2 E(32554): 5.7e-14
Smith-Waterman score: 1003; 50.8% identity (63.5% similar) in 301 aa overlap (217-514:1199-1464)
190 200 210 220 230 240
pF1KB3 IGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFG
: : ::: : :.:: :: ::::.
CCDS35 PGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGE----
1170 1180 1190 1200 1210 1220
250 260 270 280 290 300
pF1KB3 MPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGV
:: .: ::..::::: : :: . : : :::::: ::.::: : :.::
CCDS35 ----PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGP------PGRPGPTGFQGLPGP
1230 1240 1250 1260 1270
310 320 330 340 350 360
pF1KB3 QGPPGIPGIGK-PGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI-GKPGFPGPKGDRGM
.::::.:: : :. : :::::.:: :: : ::::: : :.::. : ::: :.
CCDS35 EGPPGLPGNGGIKGEKGNPGQPGLPG---LPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL
1280 1290 1300 1310 1320 1330
370 380 390 400 410 420
pF1KB3 GGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIV-GPQG
:::: : : ::: :.:: .:: ::::: .:::: :.:::.:.. :. : :
CCDS35 PGVPGF--P-GMKGPSGVPGSAGPEGEPGL------IGPPGPPGLPGPSGQSIIIKGDAG
1340 1350 1360 1370 1380
430 440 450 460 470 480
pF1KB3 PPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKG
::: :.:::.:.:: : : .::::: :: :. :..:.::. :. : : :
CCDS35 PPGIPGQPGLKGLPG---------PQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPG
1390 1400 1410 1420 1430
490 500 510 520 530 540
pF1KB3 EPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGP
:: :: .::.:::: :. :: :: : ..
CCDS35 LPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYEGF
1440 1450 1460 1470 1480 1490
550 560 570 580 590 600
pF1KB3 PGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGA
CCDS35 SLLYVQGNKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPM
1500 1510 1520 1530 1540 1550
>--
initn: 660 init1: 660 opt: 864 Z-score: 352.8 bits: 77.1 E(32554): 2.5e-13
Smith-Waterman score: 1394; 49.2% identity (60.3% similar) in 451 aa overlap (144-571:42-462)
120 130 140 150 160 170
pF1KB3 ASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMG
::::. : .:.::. : ::.:: :: :
CCDS35 LFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGL--EGHPGLPGFPGPEG
20 30 40 50 60
180 190 200 210 220 230
pF1KB3 MPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP
:: .: :::. : : :::.: :: ::::. :: :::::.:: : ::.:.::
CCDS35 PPGPRG---QKGDDGIPGPPGPKGIRGPPGLPGF--PGTPGLPGMPGHDGAPGPQGIPG-
70 80 90 100 110 120
240 250 260 270 280
pF1KB3 QGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGV-GKPG---VTGFPGPQGPLGKP
: ::..:: ::.:: ::..::::: :.::. :.:: ....:::.: : :
CCDS35 --CNGTKGERGF--PGSPGF---PGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYP
130 140 150 160 170
290 300 310 320 330 340
pF1KB3 GAPGEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPG-----FPGGKGEQGLPGLPG
: :: : :: :.:: :::: ::. : :: :.:: : : : :::.: :: :
CCDS35 GPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
180 190 200 210 220 230
350 360 370 380 390
pF1KB3 PPGLPG-IGKPGFPGP----KGDRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPG-LPGI
::: :: :.. : :::.:. :: ..:: : ::: :::: :: :
CCDS35 PPGPPGQISEQKRPIDVEFQKGDQGL---PG------DRGPPGPPGIRGPPGPPGGEKGE
240 250 260 270 280
400 410 420 430 440 450
pF1KB3 PGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGL--P
: .: :: : :: ::.: : : :: : :: : :. : :..:::: :: :
CCDS35 KGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIP
290 300 310 320 330 340
460 470 480 490 500 510
pF1KB3 GPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIP
: : :.:: ::::.:: : .: ::: : :: :::: .: : ::::.:
CCDS35 RP-GTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPP----GPPGFP
350 360 370 380 390 400
520 530 540 550 560 570
pF1KB3 GPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGP-----PGPPGPPGP
: .:. : ::::. : ::. : : :: :: :: : : .: ::::::::
CCDS35 GERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAG-PHIPPSDEICEPGPPGPPGS
410 420 430 440 450 460
580 590 600 610 620 630
pF1KB3 PAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVG
:
CCDS35 PGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAG
470 480 490 500 510 520
>>CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690 aa)
initn: 644 init1: 644 opt: 1613 Z-score: 638.6 bits: 130.0 E(32554): 3e-29
Smith-Waterman score: 1721; 43.4% identity (53.2% similar) in 705 aa overlap (47-632:684-1384)
20 30 40 50 60 70
pF1KB3 ISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPH
.. : : :.. :. : .. : : :
CCDS78 VRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG-PTGDPGPS
660 670 680 690 700 710
80 90 100 110 120 130
pF1KB3 LQYGKE----YPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGP-
: :.. : :: : . : : . : . : .. :. ::::. :: ::
CCDS78 GQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPR
720 730 740 750 760 770
140 150 160 170
pF1KB3 -----------PGPPGLPG-HGIPGIKGKPGPQGYPG-VGKPGM---PGMPGKPGAMGMP
::: : : : :: :. :::: : :: :: :: ::: : : :
CCDS78 GSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHP
780 790 800 810 820 830
180 190 200 210 220
pF1KB3 GAKGEIGQKGEIGPMG---IPGPQGPPGPHGLPGI-GKPGGPGLPGQ---PGPKGDRGPK
: .:: : .:. :: : . ::::: : : : :.:: :: ::. :: : .: :
CCDS78 GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK
840 850 860 870 880 890
230 240 250 260 270
pF1KB3 GLPGPQGLRG---PKGDKGF----GMPGA---PGVKGPPGMHGPPGPVGLPG--------
: :::::. : : : .:: :.::: ::.:: : .::::::: ::
CCDS78 GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTA
900 910 920 930 940 950
280 290 300 310 320
pF1KB3 --VGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPG----IGKPGQDGIP
.: :: : :: :: :. ::::: ::::: : ::::: :.:: :.::.::
CCDS78 GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK
960 970 980 990 1000 1010
330 340 350 360 370
pF1KB3 GQ---PGFPGGKGEQGLPGLPGPPGLPG-IGKPGF------PGPKGDRGMGGVPGALGPR
:. :: :.::..: : :::::: : .: ::. :::.:..:: : : : :
CCDS78 GEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGAR
1020 1030 1040 1050 1060 1070
380 390 400 410 420
pF1KB3 G---EKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP----
: :::: :. ::::: : : ::::::: : ::.: .: :::::::
CCDS78 GFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSV
1080 1090 1100 1110 1120 1130
430 440 450 460
pF1KB3 -----KGEPGLQGFPGKPGFLG------------------EVGPPGMRGLPGPIGPKGEA
::::: : :: :: : .:::: .: :: ::::.
CCDS78 GGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNP
1140 1150 1160 1170 1180 1190
470 480 490 500 510 520
pF1KB3 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP
: : :: :: :: :: :. :. ::.: .: :: :: :::: :::: :: .: ::
CCDS78 GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA
1200 1210 1220 1230 1240 1250
530 540 550 560
pF1KB3 GPPGFPG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGP------PGP-------------
: : : : : :: .::::: : .:::: : ::: :::
CCDS78 GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQD
1260 1270 1280 1290 1300 1310
570 580 590 600 610
pF1KB3 --PGPPGPPAV--MPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYE-MPAFT
::: :::.. . : .:: .:. : :: : .:: : :. . :.
CCDS78 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIG--PPGEQG-EKGDRGLPGTQGSPGAK
1320 1330 1340 1350 1360
620 630 640 650 660 670
pF1KB3 AELTAPFP--PVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVA
.. : : :.: :
CCDS78 GDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP
1370 1380 1390 1400 1410 1420
>--
initn: 603 init1: 603 opt: 1005 Z-score: 406.6 bits: 87.1 E(32554): 2.5e-16
Smith-Waterman score: 1132; 45.9% identity (58.4% similar) in 401 aa overlap (139-528:302-683)
110 120 130 140 150 160
pF1KB3 KEIPLASLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGK
::: : ::. .: :.: .::: . :
CCDS78 EYGEAEYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQ---KGEPAVVEPGML-VEGP
280 290 300 310 320
170 180 190 200 210 220
pF1KB3 PGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPK
:: : : : : .: :: : :: .:::: .:: :: : ::: :
CCDS78 PGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPG--------RPGLPGADGLPGPPGTM--L
330 340 350 360 370
230 240 250 260 270 280
pF1KB3 GLP---GPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGP
:: : .: .:: . .. : .. ...:::::.:: .:.:: .: :: .:
CCDS78 MLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGL--TGRPGPVGGPGSSGA
380 390 400 410 420 430
290 300 310 320 330 340
pF1KB3 LGKPGAPGEPGPQGPIGVPGVQGPPGIPGI-GKPGQDGIPGQPGFPGGKGEQGLPGLPGP
:. : .:::::: :: : :: : :: :.:: :: :.:: ::.::..:. ::::
CCDS78 KGESG---DPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGL
440 450 460 470 480 490
350 360 370 380 390
pF1KB3 PGLPGI----GKPGFPGPKGDRGMGGVPGALGPRGEKGPIGAPGIGGP---PGEPGLPGI
:: : : : ::: :: :: : : .:::: : : :. :: :: :: ::.
CCDS78 PGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGM
500 510 520 530 540 550
400 410 420 430 440 450
pF1KB3 PGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGP
: :::: : ::.:: : : :: :::.: :: :: : :: : : ::. ::::
CCDS78 AGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA
560 570 580 590 600 610
460 470 480 490 500 510
pF1KB3 IGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGP
:: :. :..: : :. : ::.: : :: .:..: :. :. : .: : :.::
CCDS78 DGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGF
620 630 640 650 660 670
520 530 540 550 560 570
pF1KB3 KGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPT
::. :: : :
CCDS78 KGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGR
680 690 700 710 720 730
>>CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767 aa)
initn: 644 init1: 644 opt: 1613 Z-score: 638.4 bits: 130.0 E(32554): 3.1e-29
Smith-Waterman score: 1721; 43.4% identity (53.2% similar) in 705 aa overlap (47-632:761-1461)
20 30 40 50 60 70
pF1KB3 ISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPH
.. : : :.. :. : .. : : :
CCDS53 VRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG-PTGDPGPS
740 750 760 770 780
80 90 100 110 120 130
pF1KB3 LQYGKE----YPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGP-
: :.. : :: : . : : . : . : .. :. ::::. :: ::
CCDS53 GQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPR
790 800 810 820 830 840
140 150 160 170
pF1KB3 -----------PGPPGLPG-HGIPGIKGKPGPQGYPG-VGKPGM---PGMPGKPGAMGMP
::: : : : :: :. :::: : :: :: :: ::: : : :
CCDS53 GSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHP
850 860 870 880 890 900
180 190 200 210 220
pF1KB3 GAKGEIGQKGEIGPMG---IPGPQGPPGPHGLPGI-GKPGGPGLPGQ---PGPKGDRGPK
: .:: : .:. :: : . ::::: : : : :.:: :: ::. :: : .: :
CCDS53 GQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAK
910 920 930 940 950 960
230 240 250 260 270
pF1KB3 GLPGPQGLRG---PKGDKGF----GMPGA---PGVKGPPGMHGPPGPVGLPG--------
: :::::. : : : .:: :.::: ::.:: : .::::::: ::
CCDS53 GDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTA
970 980 990 1000 1010 1020
280 290 300 310 320
pF1KB3 --VGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPG----IGKPGQDGIP
.: :: : :: :: :. ::::: ::::: : ::::: :.:: :.::.::
CCDS53 GPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDK
1030 1040 1050 1060 1070 1080
330 340 350 360 370
pF1KB3 GQ---PGFPGGKGEQGLPGLPGPPGLPG-IGKPGF------PGPKGDRGMGGVPGALGPR
:. :: :.::..: : :::::: : .: ::. :::.:..:: : : : :
CCDS53 GEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGAR
1090 1100 1110 1120 1130 1140
380 390 400 410 420
pF1KB3 G---EKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGP----
: :::: :. ::::: : : ::::::: : ::.: .: :::::::
CCDS53 GFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSV
1150 1160 1170 1180 1190 1200
430 440 450 460
pF1KB3 -----KGEPGLQGFPGKPGFLG------------------EVGPPGMRGLPGPIGPKGEA
::::: : :: :: : .:::: .: :: ::::.
CCDS53 GGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNP
1210 1220 1230 1240 1250 1260
470 480 490 500 510 520
pF1KB3 GQKGVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLP
: : :: :: :: :: :. :. ::.: .: :: :: :::: :::: :: .: ::
CCDS53 GPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA
1270 1280 1290 1300 1310 1320
530 540 550 560
pF1KB3 GPPGFPG-IGKPGVAGLHGPPGKPGALGPQGQPGLPGP------PGP-------------
: : : : : :: .::::: : .:::: : ::: :::
CCDS53 GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQD
1330 1340 1350 1360 1370 1380
570 580 590 600 610
pF1KB3 --PGPPGPPAV--MPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYE-MPAFT
::: :::.. . : .:: .:. : :: : .:: : :. . :.
CCDS53 GPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIG--PPGEQG-EKGDRGLPGTQGSPGAK
1390 1400 1410 1420 1430 1440
620 630 640 650 660 670
pF1KB3 AELTAPFP--PVGAPVKFNKLLYNGRQNYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVA
.. : : :.: :
CCDS53 GDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQP
1450 1460 1470 1480 1490 1500
>--
initn: 603 init1: 603 opt: 1021 Z-score: 412.5 bits: 88.2 E(32554): 1.2e-16
Smith-Waterman score: 1146; 44.3% identity (57.3% similar) in 429 aa overlap (119-528:351-760)
90 100 110 120 130 140
pF1KB3 YMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPG--------LPGH
:. : . :. . :: :. . ::
CCDS53 YENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGH
330 340 350 360 370 380
150 160 170 180 190 200
pF1KB3 GIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPG
: : ::. .: :.: .::: . : :: : : : : .: :: : :: .:::
CCDS53 GAYGEKGQ---KGEPAVVEPGML-VEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPP-
390 400 410 420 430
210 220 230 240 250
pF1KB3 PHGLPGIGKPGGPGLPGQPGPKGDRGPKGLP---GPQGLRGPKGDKGFGMPGAPGVKGPP
:.:: :: : ::: : :: : .: .:: . .. : ..
CCDS53 -------GRPGLPGADGLPGPPGTM--LMLPFRYGGDGSKGPTISAQEAQAQAILQQARI
440 450 460 470 480
260 270 280 290 300 310
pF1KB3 GMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGI-G
...:::::.:: .:.:: .: :: .: :. : .:::::: :: : :: : :: :
CCDS53 ALRGPPGPMGL--TGRPGPVGGPGSSGAKGESG---DPGPQGPRGVQGPPGPTGKPGKRG
490 500 510 520 530 540
320 330 340 350 360 370
pF1KB3 KPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGI----GKPGFPGPKGDRGMGGVPGALG
.:: :: :.:: ::.::..:. :::: :: : : : ::: :: :: : : .:
CCDS53 RPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIG
550 560 570 580 590 600
380 390 400 410 420
pF1KB3 PRGEKGPIGAPGIGGP---PGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVGPQGPPGPKG
::: : : :. :: :: :: ::. : :::: : ::.:: : : :: :::.:
CCDS53 PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQG
610 620 630 640 650 660
430 440 450 460 470 480
pF1KB3 EPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGEPGIPG
:: :: : :: : : ::. :::: :: :. :..: : :. : ::.: : ::
CCDS53 LPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPG
670 680 690 700 710 720
490 500 510 520 530 540
pF1KB3 DQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGA
.:..: :. :. : .: : :.:: ::. :: : :
CCDS53 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAG
730 740 750 760 770 780
550 560 570 580 590 600
pF1KB3 LGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPHAYGAKKGKNG
CCDS53 PTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRG
790 800 810 820 830 840
744 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:53:59 2016 done: Thu Nov 3 20:54:00 2016
Total Scan time: 4.930 Total Display time: 0.350
Function used was FASTA [36.3.4 Apr, 2011]