Result of FASTA (omim) for
pF1KB3201
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3201, 346 aa
1>>>pF1KB3201 346 - 346 aa - 346 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.8798+/-0.000677; mu= -11.7322+/- 0.040
mean_var=647.9016+/-150.021, 0's: 0 Z-trim(116.0): 1588 B-trim: 484 in 1/49
Lambda= 0.050387
statistics sampled from 24551 (26795) to 24551 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.314), width: 16
Scan time: 7.150
The best scores are: opt bits E(85289)
NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 ( 346) 2320 184.2 3.5e-46
NP_001310998 (OMIM: 601955) cyclin-dependent kinas ( 305) 2058 165.1 1.8e-40
NP_001311004 (OMIM: 601955) cyclin-dependent kinas ( 253) 1732 141.3 2.2e-33
NP_001311006 (OMIM: 601955) cyclin-dependent kinas ( 253) 1732 141.3 2.2e-33
NP_001311001 (OMIM: 601955) cyclin-dependent kinas ( 253) 1732 141.3 2.2e-33
NP_001311003 (OMIM: 601955) cyclin-dependent kinas ( 253) 1732 141.3 2.2e-33
NP_001311007 (OMIM: 601955) cyclin-dependent kinas ( 253) 1732 141.3 2.2e-33
NP_001310999 (OMIM: 601955) cyclin-dependent kinas ( 289) 1696 138.8 1.4e-32
NP_001311000 (OMIM: 601955) cyclin-dependent kinas ( 289) 1695 138.7 1.5e-32
XP_011541396 (OMIM: 601955) PREDICTED: cyclin-depe ( 229) 1585 130.6 3.4e-30
NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 ( 305) 916 82.1 1.7e-15
NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 ( 298) 908 81.5 2.6e-15
NP_004926 (OMIM: 123831,616342) cyclin-dependent-l ( 292) 880 79.5 1e-14
NP_001307847 (OMIM: 116940) cyclin-dependent kinas ( 297) 855 77.7 3.7e-14
NP_001777 (OMIM: 116940) cyclin-dependent kinase 1 ( 297) 855 77.7 3.7e-14
XP_005270360 (OMIM: 116940) PREDICTED: cyclin-depe ( 297) 855 77.7 3.7e-14
NP_001034892 (OMIM: 610076) cyclin-dependent kinas ( 346) 844 77.0 7e-14
NP_277071 (OMIM: 116951) cyclin-dependent kinase 1 ( 770) 834 76.7 1.8e-13
NP_001300911 (OMIM: 116951) cyclin-dependent kinas ( 779) 834 76.8 1.8e-13
NP_076916 (OMIM: 116951) cyclin-dependent kinase 1 ( 780) 834 76.8 1.8e-13
NP_001300825 (OMIM: 116951) cyclin-dependent kinas ( 783) 834 76.8 1.8e-13
XP_016870050 (OMIM: 610076) PREDICTED: cyclin-depe ( 351) 824 75.5 1.9e-13
NP_277022 (OMIM: 176873) cyclin-dependent kinase 1 ( 526) 827 76.0 2.1e-13
NP_277025 (OMIM: 176873) cyclin-dependent kinase 1 ( 565) 827 76.0 2.1e-13
XP_011540798 (OMIM: 176873) PREDICTED: cyclin-depe ( 578) 827 76.1 2.2e-13
XP_006721373 (OMIM: 603464) PREDICTED: cyclin-depe ( 343) 819 75.1 2.4e-13
NP_277024 (OMIM: 176873) cyclin-dependent kinase 1 ( 748) 827 76.2 2.5e-13
NP_443714 (OMIM: 603464) cyclin-dependent kinase 1 ( 360) 819 75.2 2.5e-13
XP_011540797 (OMIM: 176873) PREDICTED: cyclin-depe ( 760) 827 76.2 2.5e-13
XP_016858417 (OMIM: 176873) PREDICTED: cyclin-depe ( 761) 827 76.2 2.5e-13
XP_016858416 (OMIM: 176873) PREDICTED: cyclin-depe ( 770) 827 76.2 2.5e-13
XP_011540796 (OMIM: 176873) PREDICTED: cyclin-depe ( 770) 827 76.2 2.5e-13
NP_001278274 (OMIM: 176873) cyclin-dependent kinas ( 772) 827 76.2 2.5e-13
XP_016858415 (OMIM: 176873) PREDICTED: cyclin-depe ( 781) 827 76.2 2.6e-13
NP_277021 (OMIM: 176873) cyclin-dependent kinase 1 ( 782) 827 76.3 2.6e-13
XP_006711128 (OMIM: 176873) PREDICTED: cyclin-depe ( 785) 827 76.3 2.6e-13
XP_016858414 (OMIM: 176873) PREDICTED: cyclin-depe ( 791) 827 76.3 2.6e-13
XP_011540795 (OMIM: 176873) PREDICTED: cyclin-depe ( 794) 827 76.3 2.6e-13
NP_001778 (OMIM: 176873) cyclin-dependent kinase 1 ( 795) 827 76.3 2.6e-13
XP_011540794 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 827 76.3 2.6e-13
XP_011540793 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 827 76.3 2.6e-13
XP_011540792 (OMIM: 176873) PREDICTED: cyclin-depe ( 804) 827 76.3 2.6e-13
XP_016870051 (OMIM: 610076) PREDICTED: cyclin-depe ( 329) 782 72.4 1.5e-12
XP_016879296 (OMIM: 603464) PREDICTED: cyclin-depe ( 337) 778 72.1 1.9e-12
XP_006721371 (OMIM: 603464) PREDICTED: cyclin-depe ( 354) 778 72.2 2e-12
XP_016867809 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 764 71.3 4.4e-12
XP_005250495 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 764 71.3 4.4e-12
NP_001274065 (OMIM: 610679) cyclin-dependent kinas ( 423) 764 71.3 4.4e-12
XP_005250496 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 764 71.3 4.4e-12
XP_016867810 (OMIM: 610679) PREDICTED: cyclin-depe ( 423) 764 71.3 4.4e-12
>>NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 iso (346 aa)
initn: 2320 init1: 2320 opt: 2320 Z-score: 950.1 bits: 184.2 E(85289): 3.5e-46
Smith-Waterman score: 2320; 100.0% identity (100.0% similar) in 346 aa overlap (1-346:1-346)
10 20 30 40 50 60
pF1KB3 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG
250 260 270 280 290 300
310 320 330 340
pF1KB3 PTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
310 320 330 340
>>NP_001310998 (OMIM: 601955) cyclin-dependent kinase 7 (305 aa)
initn: 2058 init1: 2058 opt: 2058 Z-score: 847.7 bits: 165.1 E(85289): 1.8e-40
Smith-Waterman score: 2058; 100.0% identity (100.0% similar) in 304 aa overlap (43-346:2-305)
20 30 40 50 60 70
pF1KB3 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP
::::::::::::::::::::::::::::::
NP_001 MIKLGHRSEAKDGINRTALREIKLLQELSHP
10 20 30
80 90 100 110 120 130
pF1KB3 NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB3 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB3 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB3 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNC
220 230 240 250 260 270
320 330 340
pF1KB3 PVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
::::::::::::::::::::::::::::::::::
NP_001 PVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
280 290 300
>>NP_001311004 (OMIM: 601955) cyclin-dependent kinase 7 (253 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 720.4 bits: 141.3 E(85289): 2.2e-33
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 253 aa overlap (94-346:1-253)
70 80 90 100 110 120
pF1KB3 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ
::::::::::::::::::::::::::::::
NP_001 METDLEVIIKDNSLVLTPSHIKAYMLMTLQ
10 20 30
130 140 150 160 170 180
pF1KB3 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB3 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB3 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
160 170 180 190 200 210
310 320 330 340
pF1KB3 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
220 230 240 250
>>NP_001311006 (OMIM: 601955) cyclin-dependent kinase 7 (253 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 720.4 bits: 141.3 E(85289): 2.2e-33
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 253 aa overlap (94-346:1-253)
70 80 90 100 110 120
pF1KB3 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ
::::::::::::::::::::::::::::::
NP_001 METDLEVIIKDNSLVLTPSHIKAYMLMTLQ
10 20 30
130 140 150 160 170 180
pF1KB3 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB3 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB3 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
160 170 180 190 200 210
310 320 330 340
pF1KB3 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
220 230 240 250
>>NP_001311001 (OMIM: 601955) cyclin-dependent kinase 7 (253 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 720.4 bits: 141.3 E(85289): 2.2e-33
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 253 aa overlap (94-346:1-253)
70 80 90 100 110 120
pF1KB3 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ
::::::::::::::::::::::::::::::
NP_001 METDLEVIIKDNSLVLTPSHIKAYMLMTLQ
10 20 30
130 140 150 160 170 180
pF1KB3 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB3 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB3 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
160 170 180 190 200 210
310 320 330 340
pF1KB3 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
220 230 240 250
>>NP_001311003 (OMIM: 601955) cyclin-dependent kinase 7 (253 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 720.4 bits: 141.3 E(85289): 2.2e-33
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 253 aa overlap (94-346:1-253)
70 80 90 100 110 120
pF1KB3 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ
::::::::::::::::::::::::::::::
NP_001 METDLEVIIKDNSLVLTPSHIKAYMLMTLQ
10 20 30
130 140 150 160 170 180
pF1KB3 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB3 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB3 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
160 170 180 190 200 210
310 320 330 340
pF1KB3 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
220 230 240 250
>>NP_001311007 (OMIM: 601955) cyclin-dependent kinase 7 (253 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 720.4 bits: 141.3 E(85289): 2.2e-33
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 253 aa overlap (94-346:1-253)
70 80 90 100 110 120
pF1KB3 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ
::::::::::::::::::::::::::::::
NP_001 METDLEVIIKDNSLVLTPSHIKAYMLMTLQ
10 20 30
130 140 150 160 170 180
pF1KB3 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB3 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB3 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
160 170 180 190 200 210
310 320 330 340
pF1KB3 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::::::::
NP_001 GCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
220 230 240 250
>>NP_001310999 (OMIM: 601955) cyclin-dependent kinase 7 (289 aa)
initn: 1696 init1: 1696 opt: 1696 Z-score: 705.7 bits: 138.8 E(85289): 1.4e-32
Smith-Waterman score: 1833; 83.5% identity (83.5% similar) in 346 aa overlap (1-346:1-289)
10 20 30 40 50 60
pF1KB3 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
::::::::::::::::::::::::::::::::::::::::::
NP_001 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKK------------------
10 20 30 40
70 80 90 100 110 120
pF1KB3 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
:::::::::::::::::::::
NP_001 ---------------------------------------VIIKDNSLVLTPSHIKAYMLM
50 60
130 140 150 160 170 180
pF1KB3 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
70 80 90 100 110 120
190 200 210 220 230 240
pF1KB3 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB3 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG
190 200 210 220 230 240
310 320 330 340
pF1KB3 PTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
250 260 270 280
>>NP_001311000 (OMIM: 601955) cyclin-dependent kinase 7 (289 aa)
initn: 1695 init1: 1695 opt: 1695 Z-score: 705.3 bits: 138.7 E(85289): 1.5e-32
Smith-Waterman score: 1695; 100.0% identity (100.0% similar) in 247 aa overlap (100-346:43-289)
70 80 90 100 110 120
pF1KB3 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH
::::::::::::::::::::::::::::::
NP_001 PPFTRPEIRTPTKLSPLRKSNLDIDQKLKMVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH
20 30 40 50 60 70
130 140 150 160 170 180
pF1KB3 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB3 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB3 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR
200 210 220 230 240 250
310 320 330 340
pF1KB3 PNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
:::::::::::::::::::::::::::::::::::::
NP_001 PNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF
260 270 280
>>XP_011541396 (OMIM: 601955) PREDICTED: cyclin-dependen (229 aa)
initn: 1585 init1: 1585 opt: 1585 Z-score: 663.1 bits: 130.6 E(85289): 3.4e-30
Smith-Waterman score: 1585; 100.0% identity (100.0% similar) in 229 aa overlap (118-346:1-229)
90 100 110 120 130 140
pF1KB3 SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE
::::::::::::::::::::::::::::::
XP_011 MLMTLQGLEYLHQHWILHRDLKPNNLLLDE
10 20 30
150 160 170 180 190 200
pF1KB3 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB3 LRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB3 LLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAI
160 170 180 190 200 210
330 340
pF1KB3 KRKRTEALEQGGLPKKLIF
:::::::::::::::::::
XP_011 KRKRTEALEQGGLPKKLIF
220
346 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:47:37 2016 done: Thu Nov 3 20:47:38 2016
Total Scan time: 7.150 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]