Result of FASTA (omim) for
pF1KB3090
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3090, 618 aa
1>>>pF1KB3090 618 - 618 aa - 618 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8215+/-0.000396; mu= 18.2315+/- 0.025
mean_var=120.1113+/-25.651, 0's: 0 Z-trim(115.1): 154 B-trim: 885 in 1/54
Lambda= 0.117026
statistics sampled from 25126 (25324) to 25126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.297), width: 16
Scan time: 11.380
The best scores are: opt bits E(85289)
NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618) 4196 720.2 5.3e-207
NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618) 4196 720.2 5.3e-207
NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569) 3862 663.7 4.7e-190
XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604) 3045 525.8 1.6e-148
NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 3045 525.8 1.6e-148
NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 3045 525.8 1.6e-148
NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497) 688 127.8 8.9e-29
XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497) 688 127.8 8.9e-29
XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497) 688 127.8 8.9e-29
NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497) 688 127.8 8.9e-29
NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280) 390 77.2 8.4e-14
NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298) 384 76.2 1.8e-13
NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403) 310 64.4 2.9e-09
NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241) 260 56.0 9.4e-07
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264) 217 48.0 5e-05
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390) 217 48.2 6.5e-05
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445) 217 48.2 7.2e-05
NP_001017368 (OMIM: 609735) E3 ubiquitin-protein l ( 363) 205 46.1 0.00025
XP_016860049 (OMIM: 605638) PREDICTED: baculoviral (3983) 217 49.2 0.00032
XP_011531307 (OMIM: 605638) PREDICTED: baculoviral (3989) 217 49.2 0.00032
XP_016860048 (OMIM: 605638) PREDICTED: baculoviral (4715) 217 49.3 0.00036
XP_011531305 (OMIM: 605638) PREDICTED: baculoviral (4779) 217 49.3 0.00036
XP_016860047 (OMIM: 605638) PREDICTED: baculoviral (4837) 217 49.3 0.00036
XP_005264512 (OMIM: 605638) PREDICTED: baculoviral (4840) 217 49.3 0.00036
XP_005264511 (OMIM: 605638) PREDICTED: baculoviral (4847) 217 49.3 0.00036
XP_016860046 (OMIM: 605638) PREDICTED: baculoviral (4847) 217 49.3 0.00036
XP_006712119 (OMIM: 605638) PREDICTED: baculoviral (4851) 217 49.3 0.00036
NP_057336 (OMIM: 605638) baculoviral IAP repeat-co (4857) 217 49.3 0.00036
XP_016860045 (OMIM: 605638) PREDICTED: baculoviral (4858) 217 49.3 0.00036
XP_005264510 (OMIM: 605638) PREDICTED: baculoviral (4861) 217 49.3 0.00037
XP_006712118 (OMIM: 605638) PREDICTED: baculoviral (4864) 217 49.3 0.00037
XP_005264509 (OMIM: 605638) PREDICTED: baculoviral (4870) 217 49.3 0.00037
XP_005264508 (OMIM: 605638) PREDICTED: baculoviral (4875) 217 49.3 0.00037
XP_006712117 (OMIM: 605638) PREDICTED: baculoviral (4878) 217 49.3 0.00037
XP_005264507 (OMIM: 605638) PREDICTED: baculoviral (4880) 217 49.3 0.00037
XP_005264506 (OMIM: 605638) PREDICTED: baculoviral (4884) 217 49.3 0.00037
NP_001243787 (OMIM: 608299) E3 ubiquitin-protein l ( 180) 190 43.2 0.00091
NP_079402 (OMIM: 608299) E3 ubiquitin-protein liga ( 372) 190 43.6 0.0015
NP_919247 (OMIM: 608299) E3 ubiquitin-protein liga ( 373) 190 43.6 0.0015
XP_016870773 (OMIM: 610933,614436) PREDICTED: E3 u ( 460) 182 42.3 0.0044
XP_006717379 (OMIM: 610933,614436) PREDICTED: E3 u ( 690) 182 42.5 0.0058
NP_001177652 (OMIM: 610933,614436) E3 ubiquitin-pr ( 696) 182 42.5 0.0058
XP_016870772 (OMIM: 610933,614436) PREDICTED: E3 u ( 723) 182 42.5 0.006
NP_612370 (OMIM: 610933,614436) E3 ubiquitin-prote ( 723) 182 42.5 0.006
NP_001005374 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723) 182 42.5 0.006
NP_001005373 (OMIM: 610933,614436) E3 ubiquitin-pr ( 723) 182 42.5 0.006
XP_011524400 (OMIM: 608677,615092) PREDICTED: E3 u ( 516) 180 42.0 0.006
NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142) 172 40.1 0.0064
XP_016881362 (OMIM: 608677,615092) PREDICTED: E3 u ( 834) 180 42.3 0.0083
NP_065825 (OMIM: 608677,615092) E3 ubiquitin-prote (1006) 180 42.3 0.0095
>>NP_001243092 (OMIM: 601712) baculoviral IAP repeat-con (618 aa)
initn: 4196 init1: 4196 opt: 4196 Z-score: 3837.3 bits: 720.2 E(85289): 5.3e-207
Smith-Waterman score: 4196; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)
10 20 30 40 50 60
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
550 560 570 580 590 600
610
pF1KB3 KCPICRGIIKGTVRTFLS
::::::::::::::::::
NP_001 KCPICRGIIKGTVRTFLS
610
>>NP_001157 (OMIM: 601712) baculoviral IAP repeat-contai (618 aa)
initn: 4196 init1: 4196 opt: 4196 Z-score: 3837.3 bits: 720.2 E(85289): 5.3e-207
Smith-Waterman score: 4196; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)
10 20 30 40 50 60
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLR
550 560 570 580 590 600
610
pF1KB3 KCPICRGIIKGTVRTFLS
::::::::::::::::::
NP_001 KCPICRGIIKGTVRTFLS
610
>>NP_001243095 (OMIM: 601712) baculoviral IAP repeat-con (569 aa)
initn: 3862 init1: 3862 opt: 3862 Z-score: 3533.0 bits: 663.7 E(85289): 4.7e-190
Smith-Waterman score: 3862; 100.0% identity (100.0% similar) in 569 aa overlap (50-618:1-569)
20 30 40 50 60 70
pF1KB3 SIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVND
::::::::::::::::::::::::::::::
NP_001 MSTYSTFPAGVPVSERSLARAGFYYTGVND
10 20 30
80 90 100 110 120 130
pF1KB3 KVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB3 SPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB3 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB3 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB3 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB3 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB3 EKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILDNLLKANVINKQEHDIIKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCVLPILDNLLKANVINKQEHDIIKQK
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB3 TQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLE
460 470 480 490 500 510
560 570 580 590 600 610
pF1KB3 EQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS
520 530 540 550 560
>>XP_016873132 (OMIM: 601721) PREDICTED: baculoviral IAP (604 aa)
initn: 2444 init1: 1945 opt: 3045 Z-score: 2787.2 bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)
10 20 30 40 50
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
.:.:.: .::. .: : ..:::.::::::::::::::::
XP_016 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
10 20 30 40
60 70 80 90 100 110
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
XP_016 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
. : .::. : : . :: .::: : :.:. : ::::. ::.:::: .:.:. .
XP_016 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
: ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
XP_016 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
:::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
XP_016 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
:::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
XP_016 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
:::::::::. :.:::. :::: :::. ::::.::::::...:.::::.:.:::::::
XP_016 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
:::.:::::. :::.: ::::::: ::::.:. .:: :.:: :::::::::::.::::
XP_016 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
.::::.:: :..::.::::.:::::: ::::::::::::::: ::..:.: :.: ...:
XP_016 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
:..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
XP_016 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
530 540 550 560 570 580
600 610
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
:::::::::::. ::::::::::
XP_016 APSLRKCPICRSTIKGTVRTFLS
590 600
>>NP_001156 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 2444 init1: 1945 opt: 3045 Z-score: 2787.2 bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)
10 20 30 40 50
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
.:.:.: .::. .: : ..:::.::::::::::::::::
NP_001 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
10 20 30 40
60 70 80 90 100 110
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
NP_001 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
. : .::. : : . :: .::: : :.:. : ::::. ::.:::: .:.:. .
NP_001 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
: ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
NP_001 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
:::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
NP_001 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
:::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
NP_001 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
:::::::::. :.:::. :::: :::. ::::.::::::...:.::::.:.:::::::
NP_001 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
:::.:::::. :::.: ::::::: ::::.:. .:: :.:: :::::::::::.::::
NP_001 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
.::::.:: :..::.::::.:::::: ::::::::::::::: ::..:.: :.: ...:
NP_001 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
:..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
NP_001 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
530 540 550 560 570 580
600 610
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
:::::::::::. ::::::::::
NP_001 APSLRKCPICRSTIKGTVRTFLS
590 600
>>NP_892007 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 2444 init1: 1945 opt: 3045 Z-score: 2787.2 bits: 525.8 E(85289): 1.6e-148
Smith-Waterman score: 3045; 72.8% identity (89.2% similar) in 604 aa overlap (20-618:2-604)
10 20 30 40 50
pF1KB3 MHKTASQRLFPGPSYQNIKSIMEDSTILSDWTNS-NKQKMKYDFSCELYRMSTYSTFPAG
.:.:.: .::. .: : ..:::.::::::::::::::::
NP_892 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAG
10 20 30 40
60 70 80 90 100 110
pF1KB3 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSA
::::::::::::::::::::::::::::::::::: :::: .:::.::::: :.:.: :.
NP_892 VPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFVQSLNSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB3 S-LGSTSKNTSP--MRNSFAHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNP
. : .::. : : . :: .::: : :.:. : ::::. ::.:::: .:.:. .
NP_892 NNLEATSQPTFPSSVTNS-THSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB3 YSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDA
: ::..:.::.::.. ::::::::..::.::::::::::::::::::::::::::::.:
NP_892 YHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 MSEHRRHFPNCPFLENSLE-TLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
:::: ::::.:::.::.:. : :...:::::::::::..::. ::::: :.:::::::::
NP_892 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
:::: .:::::::::::::::::::::::.:::::::::.:::.:::::. ..:. ::::
NP_892 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
:::::::::. :.:::. :::: :::. ::::.::::::...:.::::.:.:::::::
NP_892 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB3 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
:::.:::::. :::.: ::::::: ::::.:. .:: :.:: :::::::::::.::::
NP_892 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB3 LPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEIDSTL
.::::.:: :..::.::::.:::::: ::::::::::::::: ::..:.: :.: ...:
NP_892 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB3 YKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
:..:::....::::::::: : .::::::::::::::::::::::.:::::::::::..:
NP_892 YEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDC
530 540 550 560 570 580
600 610
pF1KB3 APSLRKCPICRGIIKGTVRTFLS
:::::::::::. ::::::::::
NP_892 APSLRKCPICRSTIKGTVRTFLS
590 600
>>NP_001158 (OMIM: 300079,300635,308240) E3 ubiquitin-pr (497 aa)
initn: 1048 init1: 507 opt: 688 Z-score: 637.6 bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)
20 30 40 50 60 70
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
.: :. :..:...::.: ::: .:::::
NP_001 MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
10 20 30 40 50
80 90 100 110 120 130
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
: ::: .: :.:: : .: :. ::: . .:... :.: ::... . .. : :.. .
NP_001 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
... ... . .: .: : . . : . : :::.. : . :: .::::. .
NP_001 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
120 130 140 150 160
200 210 220 230 240
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
.. :: . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
NP_001 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
170 180 190 200 210 220
250 260 270 280 290
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
. . ..: : : : :: . ::. :: : : :. :::: :
NP_001 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
::: .:..: :::: : ::: :. ..::: .::::.: :..:...::::....:.
NP_001 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
: ::. :. :.. : :. . : .....:.:. :..:::. .:.
NP_001 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
350 360 370 380 390
420 430 440 450 460 470
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
.. :: .: :::... .:. :.::. .. ..:.
NP_001 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
400 410 420
480 490 500 510 520 530
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
.: :: :::
NP_001 ---------------------------SQTSLQ-----------------------KEI-
430
540 550 560 570 580 590
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
: ::::::::::. ::.:::.....::.::::::.:
NP_001 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
440 450 460 470
600 610
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
..:: .. :::.: .: . :.:
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>>XP_011529631 (OMIM: 300079,300635,308240) PREDICTED: E (497 aa)
initn: 1048 init1: 507 opt: 688 Z-score: 637.6 bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)
20 30 40 50 60 70
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
.: :. :..:...::.: ::: .:::::
XP_011 MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
10 20 30 40 50
80 90 100 110 120 130
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
: ::: .: :.:: : .: :. ::: . .:... :.: ::... . .. : :.. .
XP_011 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
... ... . .: .: : . . : . : :::.. : . :: .::::. .
XP_011 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
120 130 140 150 160
200 210 220 230 240
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
.. :: . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
XP_011 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
170 180 190 200 210 220
250 260 270 280 290
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
. . ..: : : : :: . ::. :: : : :. :::: :
XP_011 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
::: .:..: :::: : ::: :. ..::: .::::.: :..:...::::....:.
XP_011 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
: ::. :. :.. : :. . : .....:.:. :..:::. .:.
XP_011 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
350 360 370 380 390
420 430 440 450 460 470
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
.. :: .: :::... .:. :.::. .. ..:.
XP_011 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
400 410 420
480 490 500 510 520 530
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
.: :: :::
XP_011 ---------------------------SQTSLQ-----------------------KEI-
430
540 550 560 570 580 590
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
: ::::::::::. ::.:::.....::.::::::.:
XP_011 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
440 450 460 470
600 610
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
..:: .. :::.: .: . :.:
XP_011 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>>XP_006724817 (OMIM: 300079,300635,308240) PREDICTED: E (497 aa)
initn: 1048 init1: 507 opt: 688 Z-score: 637.6 bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)
20 30 40 50 60 70
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
.: :. :..:...::.: ::: .:::::
XP_006 MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
10 20 30 40 50
80 90 100 110 120 130
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
: ::: .: :.:: : .: :. ::: . .:... :.: ::... . .. : :.. .
XP_006 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
... ... . .: .: : . . : . : :::.. : . :: .::::. .
XP_006 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
120 130 140 150 160
200 210 220 230 240
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
.. :: . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
XP_006 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
170 180 190 200 210 220
250 260 270 280 290
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
. . ..: : : : :: . ::. :: : : :. :::: :
XP_006 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
::: .:..: :::: : ::: :. ..::: .::::.: :..:...::::....:.
XP_006 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
: ::. :. :.. : :. . : .....:.:. :..:::. .:.
XP_006 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
350 360 370 380 390
420 430 440 450 460 470
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
.. :: .: :::... .:. :.::. .. ..:.
XP_006 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
400 410 420
480 490 500 510 520 530
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
.: :: :::
XP_006 ---------------------------SQTSLQ-----------------------KEI-
430
540 550 560 570 580 590
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
: ::::::::::. ::.:::.....::.::::::.:
XP_006 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
440 450 460 470
600 610
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
..:: .. :::.: .: . :.:
XP_006 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>>NP_001191330 (OMIM: 300079,300635,308240) E3 ubiquitin (497 aa)
initn: 1048 init1: 507 opt: 688 Z-score: 637.6 bits: 127.8 E(85289): 8.9e-29
Smith-Waterman score: 1085; 34.1% identity (55.7% similar) in 596 aa overlap (42-618:22-497)
20 30 40 50 60 70
pF1KB3 GPSYQNIKSIMEDSTILSDWTNSNKQKMKYDFSCELYRMSTYSTFPAGVPVSERSLARAG
.: :. :..:...::.: ::: .:::::
NP_001 MTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFPSGSPVSASTLARAG
10 20 30 40 50
80 90 100 110 120 130
pF1KB3 FYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLVSASLGSTSKNTSPM
: ::: .: :.:: : .: :. ::: . .:... :.: ::... . .. : :.. .
NP_001 FLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFYLENSATQSTNSGIQ
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB3 RNSF-AHSLSPTLEHSSLFSGSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLT
... ... . .: .: : . . : . : :::.. : . :: .::::. .
NP_001 NGQYKVENYLGSRDHFALDRPSETH-ADYLLRTGQVVDISDT-IYPRNPAMYSEEARLKS
120 130 140 150 160
200 210 220 230 240
pF1KB3 YHMWP-LTFLSPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPF
.. :: . :.: ::: ::.:: : ::.: :: :::::.:::: : : :::::::::: :
NP_001 FQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF
170 180 190 200 210 220
250 260 270 280 290
pF1KB3 LENSLETLR-----------FSIS-----NLSMQTHAARMRTFMYWPSSVPVQPEQLASA
. . ..: : : : :: . ::. :: : : :. :::: :
NP_001 VLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQLARA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 GFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYP
::: .:..: :::: : ::: :. ..::: .::::.: :..:...::::....:.
NP_001 GFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIH--LT
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 HLLEQ-LLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQT
: ::. :. :.. : :. . : .....:.:. :..:::. .:.
NP_001 HSLEECLVRTTEKT-------------PSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKI
350 360 370 380 390
420 430 440 450 460 470
pF1KB3 VQSKILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQL
.. :: .: :::... .:. :.::. .. ..:.
NP_001 MEEKIQISGSNYKSLEVLVADLVNAQKDSMQDES--------------------------
400 410 420
480 490 500 510 520 530
pF1KB3 TCVLPILDNLLKANVINKQEHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNCLKEID
.: :: :::
NP_001 ---------------------------SQTSLQ-----------------------KEI-
430
540 550 560 570 580 590
pF1KB3 STLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVC
: ::::::::::. ::.:::.....::.::::::.:
NP_001 ------------------------STEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
440 450 460 470
600 610
pF1KB3 QECAPSLRKCPICRGIIKGTVRTFLS
..:: .. :::.: .: . :.:
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
618 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:20:33 2016 done: Thu Nov 3 12:20:34 2016
Total Scan time: 11.380 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]