Result of FASTA (omim) for
pF1KB3085
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3085, 211 aa
1>>>pF1KB3085 211 - 211 aa - 211 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4838+/-0.000315; mu= 19.6901+/- 0.020
mean_var=73.8817+/-14.388, 0's: 0 Z-trim(117.2): 58 B-trim: 0 in 0/53
Lambda= 0.149213
statistics sampled from 28903 (28968) to 28903 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.34), width: 16
Scan time: 6.320
The best scores are: opt bits E(85289)
NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211) 1419 313.9 1.2e-85
NP_001298 (OMIM: 609131) claudin-7 isoform 1 precu ( 211) 925 207.6 1.3e-53
NP_001171951 (OMIM: 609131) claudin-7 isoform 1 pr ( 211) 925 207.6 1.3e-53
NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211) 887 199.4 3.7e-51
NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224) 881 198.1 9.3e-51
NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] ( 220) 734 166.5 3.1e-41
NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] ( 209) 729 165.4 6.3e-41
NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] ( 217) 727 164.9 8.7e-41
NP_067018 (OMIM: 615798) claudin-6 precursor [Homo ( 220) 685 155.9 4.6e-38
NP_001124333 (OMIM: 602101) claudin-5 [Homo sapien ( 303) 684 155.8 6.6e-38
XP_016884418 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 684 155.8 6.6e-38
NP_003268 (OMIM: 602101) claudin-5 [Homo sapiens] ( 303) 684 155.8 6.6e-38
XP_016884419 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 684 155.8 6.6e-38
NP_652763 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 649 148.2 1.1e-35
NP_001139549 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 649 148.2 1.1e-35
NP_001139550 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 649 148.2 1.1e-35
NP_001139551 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 649 148.2 1.1e-35
NP_036262 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 649 148.2 1.1e-35
NP_001171952 (OMIM: 609131) claudin-7 isoform 2 pr ( 145) 619 141.5 6.6e-34
NP_001172046 (OMIM: 248190,610036) claudin-19 isof ( 218) 608 139.3 4.5e-33
NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] ( 224) 602 138.0 1.1e-32
NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] ( 225) 588 135.0 9.1e-32
NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens] ( 230) 529 122.3 6.1e-28
NP_001164563 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 529 122.3 6.1e-28
NP_001164566 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 529 122.3 6.1e-28
NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] ( 228) 479 111.6 1.1e-24
NP_001172009 (OMIM: 615778) claudin-15 [Homo sapie ( 228) 479 111.6 1.1e-24
NP_005593 (OMIM: 601326) claudin-11 isoform 1 [Hom ( 207) 379 90.0 3e-18
NP_001002026 (OMIM: 609210) claudin-18 isoform 2 [ ( 261) 355 85.0 1.3e-16
NP_057453 (OMIM: 609210) claudin-18 isoform 1 prec ( 261) 355 85.0 1.3e-16
NP_006571 (OMIM: 248250,603959) claudin-16 [Homo s ( 305) 280 68.9 1e-11
NP_919260 (OMIM: 609203) claudin-23 [Homo sapiens] ( 292) 245 61.3 1.8e-09
NP_001171985 (OMIM: 601326) claudin-11 isoform 2 p ( 123) 191 49.3 3.2e-06
NP_665810 (OMIM: 606405) voltage-dependent calcium ( 275) 151 41.1 0.0022
NP_001172002 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 149 40.6 0.0027
NP_036261 (OMIM: 611232) claudin-12 [Homo sapiens] ( 244) 149 40.6 0.0027
NP_001172001 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 149 40.6 0.0027
>>NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sapien (211 aa)
initn: 1419 init1: 1419 opt: 1419 Z-score: 1658.5 bits: 313.9 E(85289): 1.2e-85
Smith-Waterman score: 1419; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
130 140 150 160 170 180
190 200 210
pF1KB3 LLCCSCPRKTTSYPTPRPYPKPAPSSGKDYV
:::::::::::::::::::::::::::::::
NP_066 LLCCSCPRKTTSYPTPRPYPKPAPSSGKDYV
190 200 210
>>NP_001298 (OMIM: 609131) claudin-7 isoform 1 precursor (211 aa)
initn: 910 init1: 910 opt: 925 Z-score: 1083.7 bits: 207.6 E(85289): 1.3e-53
Smith-Waterman score: 925; 60.6% identity (86.4% similar) in 213 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
:::.::::::: .:.:::.: .. ::.:::.. :::::::.::::::.::::.::.::::
NP_001 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
...::..::.: ::..::::::::::...:: .:.::::.:::: .: ::.:.: :.:.
NP_001 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
:: ::..:::: ::: .:::..:: .::.:. :.: .:::: :.: :::...: .::::
NP_001 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA
130 140 150 160 170 180
190 200 210
pF1KB3 LLCCSCP--RKTTSYPTPRPYPKPAPSSGKDYV
:: :::: .. ..: .:: ::: .:.:.::
NP_001 LLSCSCPGNESKAGYRVPRSYPKS--NSSKEYV
190 200 210
>>NP_001171951 (OMIM: 609131) claudin-7 isoform 1 precur (211 aa)
initn: 910 init1: 910 opt: 925 Z-score: 1083.7 bits: 207.6 E(85289): 1.3e-53
Smith-Waterman score: 925; 60.6% identity (86.4% similar) in 213 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
:::.::::::: .:.:::.: .. ::.:::.. :::::::.::::::.::::.::.::::
NP_001 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
...::..::.: ::..::::::::::...:: .:.::::.:::: .: ::.:.: :.:.
NP_001 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
:: ::..:::: ::: .:::..:: .::.:. :.: .:::: :.: :::...: .::::
NP_001 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA
130 140 150 160 170 180
190 200 210
pF1KB3 LLCCSCP--RKTTSYPTPRPYPKPAPSSGKDYV
:: :::: .. ..: .:: ::: .:.:.::
NP_001 LLSCSCPGNESKAGYRVPRSYPKS--NSSKEYV
190 200 210
>>NP_001116867 (OMIM: 248190,610036) claudin-19 isoform (211 aa)
initn: 876 init1: 876 opt: 887 Z-score: 1039.5 bits: 199.4 E(85289): 3.7e-51
Smith-Waterman score: 887; 57.1% identity (85.4% similar) in 212 aa overlap (1-211:1-211)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
:::.::::::..::. ::.: :.:::::::. ::::: :.:: ..::::::::.:::::
NP_001 MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.:::..:::: :.. .:..::::::..::: .:. ...::::: . ... . : :.:.
NP_001 QVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
:::.:.:::: :.:..::.. ..:::..: :::::::::: :::.:::.:.: .:::.
NP_001 AGGALFILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS
130 140 150 160 170 180
190 200 210
pF1KB3 LLCCSCPRKTTSYPTPRPYPKPAPSSG-KDYV
.:::.::. .:.:: .:.::.. ..::
NP_001 FLCCTCPEPERPNSSPQPY-RPGPSAAAREYV
190 200 210
>>NP_683763 (OMIM: 248190,610036) claudin-19 isoform a [ (224 aa)
initn: 864 init1: 864 opt: 881 Z-score: 1032.2 bits: 198.1 E(85289): 9.3e-51
Smith-Waterman score: 881; 57.8% identity (85.4% similar) in 206 aa overlap (1-206:1-205)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
:::.::::::..::. ::.: :.:::::::. ::::: :.:: ..::::::::.:::::
NP_683 MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.:::..:::: :.. .:..::::::..::: .:. ...::::: . ... . : :.:.
NP_683 QVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
:::.:.:::: :.:..::.. ..:::..: :::::::::: :::.:::.:.: .:::.
NP_683 AGGALFILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS
130 140 150 160 170 180
190 200 210
pF1KB3 LLCCSCPRKTTSYPTPRPYPKPAPSSGKDYV
.:::.::. .:.:: .:.::.
NP_683 FLCCTCPEPERPNSSPQPY-RPGPSAAAREPVVKLPASAKGPLGV
190 200 210 220
>>NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] (220 aa)
initn: 745 init1: 467 opt: 734 Z-score: 861.3 bits: 166.5 E(85289): 3.1e-41
Smith-Waterman score: 735; 50.2% identity (77.2% similar) in 219 aa overlap (5-211:4-220)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
::.. : :: :::.:.:: :::.::. .. :.::.:.: ..:::::.:: ::::
NP_001 MSMGLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTG
10 20 30 40 50
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.::::.:::: : . :::.:::.::.:::......:: :: .: .:..:: . : ....
NP_001 QMQCKVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDTA-KAKITI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
..:..::::.: :: ..: .: :...::.:..: . :.: .:..:::::.: :::::
NP_001 VAGVLFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGA
120 130 140 150 160 170
190 200 210
pF1KB3 LLCCSCP---RKTTS----YPTPRPYPKPAPSSG-----KDYV
::::::: .: :. : .:: :. : : ::::
NP_001 LLCCSCPPREKKYTATKVVYSAPRS-TGPGASLGTGYDRKDYV
180 190 200 210 220
>>NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] (209 aa)
initn: 822 init1: 488 opt: 729 Z-score: 855.8 bits: 165.4 E(85289): 6.3e-41
Smith-Waterman score: 729; 46.0% identity (80.6% similar) in 211 aa overlap (1-211:1-209)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
::. :::..:. :: :::..... :::.::. .. :.::::.:...:::::.:: ::::
NP_001 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.::::.:::: : . :::.:::....:...........:: :: .:::: : : . .
NP_001 QMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLED-ESAKAKTMI
70 80 90 100 110
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
..:..:::::: ..: ..: .. :.:.::.:.. . . :.: .:..::::..: ::::.
NP_001 VAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGG
120 130 140 150 160 170
190 200 210
pF1KB3 LLCCSCPRKTTSYPTPRPYPKPAPSSGKDYV
::::.:: .: . : : .....::
NP_001 LLCCNCPPRTDK-PYSAKYSAARSAAASNYV
180 190 200
>>NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] (217 aa)
initn: 475 init1: 475 opt: 727 Z-score: 853.2 bits: 164.9 E(85289): 8.7e-41
Smith-Waterman score: 727; 49.1% identity (77.1% similar) in 218 aa overlap (1-211:1-217)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
::..::.:::. :: :::.:..:: ::: :.. .. :..::.::...:::::::: ::::
NP_066 MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.::::.:::: : . :::.::: :...::......:: .: .: :.:: : : :...
NP_066 QMQCKVYDSLLALPQDLQAARALCVIALLLALLGLLVAITGAQCTTCVED-EGAKARIVL
70 80 90 100 110
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
.:.:.::::. .:. . : .. :.:.::.:.. . :.: .:. :::::.: .:::.
NP_066 TAGVILLLAGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGG
120 130 140 150 160 170
190 200 210
pF1KB3 LLCCSCPRKTTSYPT-PR-PYPKPAPS--SG---KDYV
::::.:: . : :: : :. : :: .:::
NP_066 LLCCTCPPPQVERPRGPRLGYSIPSRSGASGLDKRDYV
180 190 200 210
>>NP_067018 (OMIM: 615798) claudin-6 precursor [Homo sap (220 aa)
initn: 462 init1: 441 opt: 685 Z-score: 804.3 bits: 155.9 E(85289): 4.6e-38
Smith-Waterman score: 685; 44.0% identity (78.3% similar) in 207 aa overlap (1-205:1-206)
10 20 30 40 50 60
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
::.::.:.:: .:..:::....:: :::.:.. .. :..::.::...:::::::: ::::
NP_067 MASAGMQILGVVLTLLGWVNGLVSCALPMWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
:.::::.:::: : . :::.::: :...:.......: .: :: :.:. . .: :...
NP_067 QMQCKVYDSLLALPQDLQAARALCVIALLVALFGLLVYLAGAKCTTCVEEKD-SKARLVL
70 80 90 100 110
130 140 150 160 170 180
pF1KB3 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
.: .:...:. :. . : .. :...::.:.. . :.: .:. ::::..: ::::.
NP_067 TSGIVFVISGVLTLIPVCWTAHAIIRDFYNPLVAEAQKRELGASLYLGWAASGLLLLGGG
120 130 140 150 160 170
190 200 210
pF1KB3 LLCCSCPRKTTSYPTPRP--YPKPAPSSGKDYV
::::.:: .. :. : ::.
NP_067 LLCCTCPSGGSQGPSHYMARYSTSAPAISRGPSEYPTKNYV
180 190 200 210 220
>>NP_001124333 (OMIM: 602101) claudin-5 [Homo sapiens] (303 aa)
initn: 662 init1: 397 opt: 684 Z-score: 801.5 bits: 155.8 E(85289): 6.6e-38
Smith-Waterman score: 684; 45.3% identity (74.3% similar) in 214 aa overlap (1-210:86-297)
10 20 30
pF1KB3 MANAGLQLLGFILAFLGWIGAIVSTALPQW
:..:.:..::..: ..:: : :.. .::.:
NP_001 GAKAPGPAQGAAQHGLGGSAGLRVRVSPLAMGSAALEILGLVLCLVGWGGLILACGLPMW
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB3 RIYSYAGDNIVTAQAMYEGLWMSCVSQSTGQIQCKVFDSLLNLSSTLQATRALMVVGILL
.. .. ::::::. ..::::::: ::::..::::.::.: ::. .::.::: : ..::
NP_001 QVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLL
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB3 GVIAIFVATVGMKCMKCLEDDEVQKMRMAVIGGAIFLLAGLAILVATAWYGNRIVQEFYD
. .:.::. .: .: :. . : :.:. ::...:. :: :: :..: .:.::::
NP_001 AFVALFVTLAGAQCTTCVAPGPA-KARVALTGGVLYLFCGLLALVPLCWFANIVVREFYD
180 190 200 210 220 230
160 170 180 190 200
pF1KB3 PMTPVNARYEFGQALFTGWAAASLCLLGGALLCCS---CP-RKTTSYPTPRPYPKPAPSS
: .::. .::.: ::. ::::..: ..:: ::::. : : :.:. :. :..
NP_001 PSVPVSQKYELGAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPR-RPTA
240 250 260 270 280 290
210
pF1KB3 GKDYV
::
NP_001 TGDYDKKNYV
300
211 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:50:02 2016 done: Sat Nov 5 04:50:03 2016
Total Scan time: 6.320 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]