Result of FASTA (omim) for
pF1KB3065
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3065, 472 aa
1>>>pF1KB3065 472 - 472 aa - 472 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0248+/-0.000521; mu= 19.6474+/- 0.033
mean_var=114.6442+/-32.487, 0's: 0 Z-trim(108.0): 430 B-trim: 1876 in 2/52
Lambda= 0.119784
statistics sampled from 15458 (16073) to 15458 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.532), E-opt: 0.2 (0.188), width: 16
Scan time: 7.360
The best scores are: opt bits E(85289)
XP_006715393 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
NP_057167 (OMIM: 114610) cannabinoid receptor 1 is ( 472) 3093 546.8 4.8e-155
NP_001153698 (OMIM: 114610) cannabinoid receptor 1 ( 472) 3093 546.8 4.8e-155
XP_011533728 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
NP_001153731 (OMIM: 114610) cannabinoid receptor 1 ( 472) 3093 546.8 4.8e-155
XP_011533730 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
NP_001153730 (OMIM: 114610) cannabinoid receptor 1 ( 472) 3093 546.8 4.8e-155
XP_011533727 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
XP_016865727 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
XP_011533726 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
XP_016865729 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
XP_016865728 (OMIM: 114610) PREDICTED: cannabinoid ( 472) 3093 546.8 4.8e-155
NP_149421 (OMIM: 114610) cannabinoid receptor 1 is ( 439) 2746 486.8 5.2e-137
NP_001832 (OMIM: 605051) cannabinoid receptor 2 [H ( 360) 666 127.2 7.4e-29
XP_016855750 (OMIM: 605051) PREDICTED: cannabinoid ( 360) 666 127.2 7.4e-29
XP_011538931 (OMIM: 605051) PREDICTED: cannabinoid ( 360) 666 127.2 7.4e-29
XP_016869875 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869891 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869896 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869889 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869894 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869886 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869883 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869888 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869892 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869872 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869887 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869873 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869880 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
NP_001392 (OMIM: 602282) lysophosphatidic acid rec ( 364) 350 72.6 2e-12
XP_016869879 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869885 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869882 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869895 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869876 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869877 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_005251839 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869881 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869878 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869893 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
NP_476500 (OMIM: 602282) lysophosphatidic acid rec ( 364) 350 72.6 2e-12
XP_016869884 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_005251838 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869890 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
XP_016869874 (OMIM: 602282) PREDICTED: lysophospha ( 364) 350 72.6 2e-12
NP_005279 (OMIM: 600752) G-protein coupled recepto ( 334) 339 70.6 7.3e-12
NP_036284 (OMIM: 605106) lysophosphatidic acid rec ( 353) 323 67.9 5.1e-11
NP_001391 (OMIM: 601974) sphingosine 1-phosphate r ( 382) 316 66.8 1.2e-10
NP_001307659 (OMIM: 601974) sphingosine 1-phosphat ( 382) 316 66.8 1.2e-10
NP_000667 (OMIM: 600446) adenosine receptor A2b [H ( 332) 314 66.3 1.4e-10
>>XP_006715393 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>NP_057167 (OMIM: 114610) cannabinoid receptor 1 isofor (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>NP_001153698 (OMIM: 114610) cannabinoid receptor 1 iso (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>XP_011533728 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>NP_001153731 (OMIM: 114610) cannabinoid receptor 1 iso (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>XP_011533730 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>NP_001153730 (OMIM: 114610) cannabinoid receptor 1 iso (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>XP_011533727 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>XP_016865727 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
>>XP_011533726 (OMIM: 114610) PREDICTED: cannabinoid rec (472 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 2904.5 bits: 546.8 E(85289): 4.8e-155
Smith-Waterman score: 3093; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)
10 20 30 40 50 60
pF1KB3 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSHAVRMIQRGTQKSIIIHTSEDGKVQVTRPDQARMDIRLAKTLVLILVVLIICWGPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQ
370 380 390 400 410 420
430 440 450 460 470
pF1KB3 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL
430 440 450 460 470
472 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:26:49 2016 done: Fri Nov 4 23:26:51 2016
Total Scan time: 7.360 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]