Result of FASTA (omim) for
pF1KB3064
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3064, 410 aa
1>>>pF1KB3064 410 - 410 aa - 410 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6826+/-0.00044; mu= 17.2538+/- 0.027
mean_var=181.9801+/-38.768, 0's: 0 Z-trim(114.2): 448 B-trim: 287 in 1/54
Lambda= 0.095074
statistics sampled from 23336 (23908) to 23336 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.28), width: 16
Scan time: 8.260
The best scores are: opt bits E(85289)
NP_000421 (OMIM: 601545,607432) platelet-activatin ( 410) 2795 396.3 7e-110
XP_016880189 (OMIM: 601545,607432) PREDICTED: plat ( 410) 2795 396.3 7e-110
XP_016880188 (OMIM: 601545,607432) PREDICTED: plat ( 410) 2795 396.3 7e-110
XP_016880190 (OMIM: 601545,607432) PREDICTED: plat ( 410) 2795 396.3 7e-110
XP_011522205 (OMIM: 601545,607432) PREDICTED: plat ( 428) 2726 386.9 5.1e-107
XP_011522203 (OMIM: 601545,607432) PREDICTED: plat ( 428) 2726 386.9 5.1e-107
XP_011522204 (OMIM: 601545,607432) PREDICTED: plat ( 428) 2726 386.9 5.1e-107
XP_016880191 (OMIM: 601545,607432) PREDICTED: plat ( 345) 2387 340.3 4.5e-93
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 475 78.0 3.9e-14
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 475 78.0 3.9e-14
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 475 78.0 3.9e-14
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 416 70.1 1.2e-11
NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478) 416 70.1 1.3e-11
NP_001188493 (OMIM: 605961) pleiotropic regulator ( 505) 392 66.9 1.3e-10
NP_002660 (OMIM: 605961) pleiotropic regulator 1 i ( 514) 392 66.9 1.3e-10
NP_006089 (OMIM: 176981) receptor of activated pro ( 317) 388 66.0 1.5e-10
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 384 66.0 3.2e-10
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 384 66.0 3.2e-10
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 384 66.0 3.2e-10
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 384 66.0 3.2e-10
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 384 66.0 3.3e-10
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 384 66.0 3.3e-10
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 384 66.0 3.3e-10
XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675) 384 66.0 3.3e-10
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 384 66.0 3.3e-10
XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675) 384 66.0 3.3e-10
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 384 66.0 3.3e-10
XP_011531867 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 365 62.7 1.2e-09
XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 365 62.7 1.2e-09
XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 365 62.7 1.2e-09
XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 365 62.8 1.3e-09
XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 365 62.9 1.3e-09
NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 365 62.9 1.4e-09
XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 365 63.0 1.4e-09
NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 365 63.0 1.5e-09
XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 350 60.8 5.6e-09
XP_016860389 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 350 60.8 5.6e-09
XP_016860391 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 350 60.8 5.6e-09
XP_016860390 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 350 60.8 5.6e-09
XP_016860387 (OMIM: 612173) PREDICTED: sperm-assoc ( 390) 350 60.9 6.1e-09
NP_008882 (OMIM: 601787) transcription initiation ( 800) 354 62.0 6.2e-09
XP_016860386 (OMIM: 612173) PREDICTED: sperm-assoc ( 512) 350 61.1 7.1e-09
XP_016860385 (OMIM: 612173) PREDICTED: sperm-assoc ( 512) 350 61.1 7.1e-09
XP_011510124 (OMIM: 612173) PREDICTED: sperm-assoc ( 528) 350 61.1 7.2e-09
XP_011510125 (OMIM: 612173) PREDICTED: sperm-assoc ( 528) 350 61.1 7.2e-09
XP_011510123 (OMIM: 612173) PREDICTED: sperm-assoc ( 537) 350 61.2 7.3e-09
XP_011510120 (OMIM: 612173) PREDICTED: sperm-assoc ( 577) 350 61.2 7.6e-09
XP_011510121 (OMIM: 612173) PREDICTED: sperm-assoc ( 577) 350 61.2 7.6e-09
XP_011510119 (OMIM: 612173) PREDICTED: sperm-assoc ( 582) 350 61.2 7.6e-09
XP_011510117 (OMIM: 612173) PREDICTED: sperm-assoc ( 592) 350 61.2 7.7e-09
>>NP_000421 (OMIM: 601545,607432) platelet-activating fa (410 aa)
initn: 2795 init1: 2795 opt: 2795 Z-score: 2093.7 bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2795; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB3 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
310 320 330 340 350 360
370 380 390 400 410
pF1KB3 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
370 380 390 400 410
>>XP_016880189 (OMIM: 601545,607432) PREDICTED: platelet (410 aa)
initn: 2795 init1: 2795 opt: 2795 Z-score: 2093.7 bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2795; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB3 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
310 320 330 340 350 360
370 380 390 400 410
pF1KB3 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
370 380 390 400 410
>>XP_016880188 (OMIM: 601545,607432) PREDICTED: platelet (410 aa)
initn: 2795 init1: 2795 opt: 2795 Z-score: 2093.7 bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2795; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB3 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
310 320 330 340 350 360
370 380 390 400 410
pF1KB3 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
370 380 390 400 410
>>XP_016880190 (OMIM: 601545,607432) PREDICTED: platelet (410 aa)
initn: 2795 init1: 2795 opt: 2795 Z-score: 2093.7 bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2795; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410)
10 20 30 40 50 60
pF1KB3 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
310 320 330 340 350 360
370 380 390 400 410
pF1KB3 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
370 380 390 400 410
>>XP_011522205 (OMIM: 601545,607432) PREDICTED: platelet (428 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2042.4 bits: 386.9 E(85289): 5.1e-107
Smith-Waterman score: 2749; 95.8% identity (95.8% similar) in 428 aa overlap (1-410:1-428)
10 20 30 40
pF1KB3 MVLSQRQRDEL------------------NRAIADYLRSNGYEEAYSVFKKEAELDVNEE
::::::::::: :::::::::::::::::::::::::::::::
XP_011 MVLSQRQRDELDWFQRGEDSILNKADEARNRAIADYLRSNGYEEAYSVFKKEAELDVNEE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB3 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB3 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB3 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB3 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB3 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
370 380 390 400 410 420
410
pF1KB3 TVKVWECR
::::::::
XP_011 TVKVWECR
>>XP_011522203 (OMIM: 601545,607432) PREDICTED: platelet (428 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2042.4 bits: 386.9 E(85289): 5.1e-107
Smith-Waterman score: 2749; 95.8% identity (95.8% similar) in 428 aa overlap (1-410:1-428)
10 20 30 40
pF1KB3 MVLSQRQRDEL------------------NRAIADYLRSNGYEEAYSVFKKEAELDVNEE
::::::::::: :::::::::::::::::::::::::::::::
XP_011 MVLSQRQRDELDWFQRGEDSILNKADEARNRAIADYLRSNGYEEAYSVFKKEAELDVNEE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB3 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB3 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB3 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB3 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB3 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
370 380 390 400 410 420
410
pF1KB3 TVKVWECR
::::::::
XP_011 TVKVWECR
>>XP_011522204 (OMIM: 601545,607432) PREDICTED: platelet (428 aa)
initn: 2726 init1: 2726 opt: 2726 Z-score: 2042.4 bits: 386.9 E(85289): 5.1e-107
Smith-Waterman score: 2749; 95.8% identity (95.8% similar) in 428 aa overlap (1-410:1-428)
10 20 30 40
pF1KB3 MVLSQRQRDEL------------------NRAIADYLRSNGYEEAYSVFKKEAELDVNEE
::::::::::: :::::::::::::::::::::::::::::::
XP_011 MVLSQRQRDELDWFQRGEDSILNKADEARNRAIADYLRSNGYEEAYSVFKKEAELDVNEE
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB3 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB3 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB3 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB3 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB3 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB3 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ
370 380 390 400 410 420
410
pF1KB3 TVKVWECR
::::::::
XP_011 TVKVWECR
>>XP_016880191 (OMIM: 601545,607432) PREDICTED: platelet (345 aa)
initn: 2387 init1: 2387 opt: 2387 Z-score: 1792.0 bits: 340.3 E(85289): 4.5e-93
Smith-Waterman score: 2387; 100.0% identity (100.0% similar) in 345 aa overlap (66-410:1-345)
40 50 60 70 80 90
pF1KB3 ELDVNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWI
::::::::::::::::::::::::::::::
XP_016 MELESKLNEAKEEFTSGGPLGQKRDPKEWI
10 20 30
100 110 120 130 140 150
pF1KB3 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB3 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB3 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB3 EHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB3 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV
280 290 300 310 320 330
400 410
pF1KB3 VTGSVDQTVKVWECR
:::::::::::::::
XP_016 VTGSVDQTVKVWECR
340
>>XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-conta (334 aa)
initn: 855 init1: 437 opt: 475 Z-score: 374.8 bits: 78.0 E(85289): 3.9e-14
Smith-Waterman score: 648; 30.5% identity (62.5% similar) in 347 aa overlap (67-408:5-331)
40 50 60 70 80 90
pF1KB3 LDVNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIP
: . . . :. . : .. :.. : :
XP_005 MATEEKKPETEAARAQPTPSSSATQSK-PTPVKP
10 20 30
100 110 120 130 140 150
pF1KB3 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI
:..:.:: . :. : : : ..:.: : ::.: : ::.:..:: ...:.
XP_005 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB3 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI
... ...::.: : : :.:.:: .. .:..:..::.. : . :... :::.: :...
XP_005 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB3 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE
..:.:.:: :.::. .: . : :. :.::.::.: : : :.: .:. .: : . .
XP_005 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB3 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG
. : :. ..: : ..:... :.:.:.:: : : :: : .:
XP_005 N--------PPVSFVKFSPN-----------GKYILAATLDNTLKLWDYSKGKCLKTYTG
220 230 240 250
340 350 360 370 380 390
pF1KB3 HDNWVRGVLFH---SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP
: : .. . .:::.:.: ..:. . .:. ..:. .. :..: : : : :
XP_005 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN
260 270 280 290 300 310
400 410
pF1KB3 YVVTGSV--DQTVKVWECR
...... :.:.:.:.
XP_005 IIASAALENDKTIKLWKSDC
320 330
>>NP_438172 (OMIM: 609012) WD repeat-containing protein (334 aa)
initn: 855 init1: 437 opt: 475 Z-score: 374.8 bits: 78.0 E(85289): 3.9e-14
Smith-Waterman score: 648; 30.5% identity (62.5% similar) in 347 aa overlap (67-408:5-331)
40 50 60 70 80 90
pF1KB3 LDVNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIP
: . . . :. . : .. :.. : :
NP_438 MATEEKKPETEAARAQPTPSSSATQSK-PTPVKP
10 20 30
100 110 120 130 140 150
pF1KB3 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI
:..:.:: . :. : : : ..:.: : ::.: : ::.:..:: ...:.
NP_438 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB3 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTI
... ...::.: : : :.:.:: .. .:..:..::.. : . :... :::.: :...
NP_438 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB3 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE
..:.:.:: :.::. .: . : :. :.::.::.: : : :.: .:. .: : . .
NP_438 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB3 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG
. : :. ..: : ..:... :.:.:.:: : : :: : .:
NP_438 N--------PPVSFVKFSPN-----------GKYILAATLDNTLKLWDYSKGKCLKTYTG
220 230 240 250
340 350 360 370 380 390
pF1KB3 HDNWVRGVLFH---SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP
: : .. . .:::.:.: ..:. . .:. ..:. .. :..: : : : :
NP_438 HKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN
260 270 280 290 300 310
400 410
pF1KB3 YVVTGSV--DQTVKVWECR
...... :.:.:.:.
NP_438 IIASAALENDKTIKLWKSDC
320 330
410 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:08:22 2016 done: Fri Nov 4 02:08:24 2016
Total Scan time: 8.260 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]