Result of FASTA (ccds) for pF1KB3051
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3051, 1215 aa
  1>>>pF1KB3051 1215 - 1215 aa - 1215 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.0787+/-0.00116; mu= -2.7133+/- 0.070
 mean_var=317.4757+/-63.669, 0's: 0 Z-trim(112.0): 35  B-trim: 0 in 0/53
 Lambda= 0.071981
 statistics sampled from 12829 (12848) to 12829 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.395), width:  16
 Scan time:  4.510

The best scores are:                                      opt bits E(32554)
CCDS58638.1 AP3D1 gene_id:8943|Hs108|chr19         (1215) 7920 837.2       0
CCDS42459.1 AP3D1 gene_id:8943|Hs108|chr19         (1153) 5626 599.0 2.2e-170


>>CCDS58638.1 AP3D1 gene_id:8943|Hs108|chr19              (1215 aa)
 initn: 7920 init1: 7920 opt: 7920  Z-score: 4459.6  bits: 837.2 E(32554):    0
Smith-Waterman score: 7920; 100.0% identity (100.0% similar) in 1215 aa overlap (1-1215:1-1215)

               10        20        30        40        50        60
pF1KB3 MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 LDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 ILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 GEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALF
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 AGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEA
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 DEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPM
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 SDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEE
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 MPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKK
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 SKKPKKKEKKHKEKERDKEKKKEKEKKAEDLDFWLSTTPPPAPAPAPAPVPSTGELSVNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SKKPKKKEKKHKEKERDKEKKKEKEKKAEDLDFWLSTTPPPAPAPAPAPVPSTGELSVNT
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB3 VTTPKDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VTTPKDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGS
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB3 EEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSS
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB3 SILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLK
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB3 GTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMSSIKVDGIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMSSIKVDGIR
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB3 MSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSVDGKCSDSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSVDGKCSDSTL
             1150      1160      1170      1180      1190      1200

             1210     
pF1KB3 LSNLLEEMKATLAKC
       :::::::::::::::
CCDS58 LSNLLEEMKATLAKC
             1210     

>>CCDS42459.1 AP3D1 gene_id:8943|Hs108|chr19              (1153 aa)
 initn: 5713 init1: 5626 opt: 5626  Z-score: 3172.4  bits: 599.0 E(32554): 2.2e-170
Smith-Waterman score: 7358; 94.9% identity (94.9% similar) in 1215 aa overlap (1-1215:1-1153)

               10        20        30        40        50        60
pF1KB3 MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 LDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 ILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 GEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALF
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 AGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEA
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 DEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPM
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 SDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEE
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 MPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKK
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 SKKPKKKEKKHKEKERDKEKKKEKEKKAEDLDFWLSTTPPPAPAPAPAPVPSTGELSVNT
       :::::::::::::::::::::::::::                                 
CCDS42 SKKPKKKEKKHKEKERDKEKKKEKEKK---------------------------------
              850       860                                        

              910       920       930       940       950       960
pF1KB3 VTTPKDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGS
                                    :::::::::::::::::::::::::::::::
CCDS42 -----------------------------KSPKPKKKKHRKEKEERTKGKKKSKKQPPGS
                                    870       880       890        

              970       980       990      1000      1010      1020
pF1KB3 EEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSS
      900       910       920       930       940       950        

             1030      1040      1050      1060      1070      1080
pF1KB3 SILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLK
      960       970       980       990      1000      1010        

             1090      1100      1110      1120      1130      1140
pF1KB3 GTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMSSIKVDGIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMSSIKVDGIR
     1020      1030      1040      1050      1060      1070        

             1150      1160      1170      1180      1190      1200
pF1KB3 MSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSVDGKCSDSTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSVDGKCSDSTL
     1080      1090      1100      1110      1120      1130        

             1210     
pF1KB3 LSNLLEEMKATLAKC
       :::::::::::::::
CCDS42 LSNLLEEMKATLAKC
     1140      1150   




1215 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 12:16:57 2016 done: Thu Nov  3 12:16:58 2016
 Total Scan time:  4.510 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
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