Result of FASTA (ccds) for
pF1KB2260
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB2260, 876 aa
1>>>pF1KB2260 876 - 876 aa - 876 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.0646+/-0.00108; mu= -10.5647+/- 0.064
mean_var=438.4538+/-96.326, 0's: 0 Z-trim(114.0): 216 B-trim: 0 in 0/53
Lambda= 0.061251
statistics sampled from 14349 (14567) to 14349 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.447), width: 16
Scan time: 5.180
The best scores are: opt bits E(32554)
CCDS4690.1 DDR1 gene_id:780|Hs108|chr6 ( 876) 6105 554.7 2.6e-157
CCDS56411.1 DDR1 gene_id:780|Hs108|chr6 ( 894) 6105 554.7 2.6e-157
CCDS34385.1 DDR1 gene_id:780|Hs108|chr6 ( 913) 3568 330.6 8.1e-90
CCDS47396.1 DDR1 gene_id:780|Hs108|chr6 ( 919) 3568 330.6 8.1e-90
CCDS75419.1 DDR1 gene_id:780|Hs108|chr6 ( 767) 3142 292.8 1.5e-78
CCDS1241.1 DDR2 gene_id:4921|Hs108|chr1 ( 855) 1250 125.7 3.5e-28
CCDS35050.1 NTRK2 gene_id:4915|Hs108|chr9 ( 822) 831 88.7 4.8e-17
CCDS6671.1 NTRK2 gene_id:4915|Hs108|chr9 ( 838) 831 88.7 4.9e-17
CCDS58399.1 NTRK3 gene_id:4916|Hs108|chr15 ( 817) 803 86.2 2.6e-16
CCDS10340.1 NTRK3 gene_id:4916|Hs108|chr15 ( 825) 803 86.2 2.7e-16
CCDS30890.1 NTRK1 gene_id:4914|Hs108|chr1 ( 760) 796 85.5 3.9e-16
CCDS30891.1 NTRK1 gene_id:4914|Hs108|chr1 ( 790) 796 85.6 4e-16
CCDS1161.1 NTRK1 gene_id:4914|Hs108|chr1 ( 796) 796 85.6 4e-16
CCDS75874.1 MUSK gene_id:4593|Hs108|chr9 ( 783) 776 83.8 1.3e-15
CCDS48005.1 MUSK gene_id:4593|Hs108|chr9 ( 869) 776 83.8 1.4e-15
CCDS626.1 ROR1 gene_id:4919|Hs108|chr1 ( 937) 685 75.8 4e-13
CCDS53525.1 RET gene_id:5979|Hs108|chr10 (1072) 660 73.7 2.1e-12
CCDS7200.1 RET gene_id:5979|Hs108|chr10 (1114) 660 73.7 2.1e-12
CCDS6691.1 ROR2 gene_id:4920|Hs108|chr9 ( 943) 653 73.0 2.9e-12
CCDS5116.1 ROS1 gene_id:6098|Hs108|chr6 (2347) 628 71.1 2.6e-11
CCDS4410.1 FGFR4 gene_id:2264|Hs108|chr5 ( 802) 613 69.4 3e-11
CCDS4411.1 FGFR4 gene_id:2264|Hs108|chr5 ( 762) 612 69.3 3e-11
CCDS78096.1 FGFR4 gene_id:2264|Hs108|chr5 ( 734) 608 68.9 3.8e-11
>>CCDS4690.1 DDR1 gene_id:780|Hs108|chr6 (876 aa)
initn: 6105 init1: 6105 opt: 6105 Z-score: 2937.8 bits: 554.7 E(32554): 2.6e-157
Smith-Waterman score: 6105; 100.0% identity (100.0% similar) in 876 aa overlap (1-876:1-876)
10 20 30 40 50 60
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB2 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB2 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB2 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB2 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB2 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB2 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB2 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB2 PPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB2 QGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB2 LDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB2 CMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 CMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB2 ATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILM
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB2 GKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACP
790 800 810 820 830 840
850 860 870
pF1KB2 QGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
::::::::::::::::::::::::::::::::::::
CCDS46 QGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
850 860 870
>>CCDS56411.1 DDR1 gene_id:780|Hs108|chr6 (894 aa)
initn: 6105 init1: 6105 opt: 6105 Z-score: 2937.7 bits: 554.7 E(32554): 2.6e-157
Smith-Waterman score: 6105; 100.0% identity (100.0% similar) in 876 aa overlap (1-876:19-894)
10 20 30 40
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTI
::::::::::::::::::::::::::::::::::::::::::
CCDS56 MSLPRCCPHPLRPEGSGAMGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB2 PDSDISASSSWSDSTAARHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PDSDISASSSWSDSTAARHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB2 QGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVAR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB2 LVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LVRFYPRADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGG
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB2 LQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB2 MQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRV
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB2 ARFLQCRFLFAGPWLLFSEISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ARFLQCRFLFAGPWLLFSEISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEP
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB2 RGQQPVAKAEGSPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RGQQPVAKAEGSPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVH
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB2 LSVPGDTILINNRPGPREPPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LSVPGDTILINNRPGPREPPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLLP
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB2 PPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEG
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB2 QFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRL
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB2 KDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTIS
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB2 YPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRV
730 740 750 760 770 780
770 780 790 800 810 820
pF1KB2 QGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGE
790 800 810 820 830 840
830 840 850 860 870
pF1KB2 FFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
850 860 870 880 890
>>CCDS34385.1 DDR1 gene_id:780|Hs108|chr6 (913 aa)
initn: 3545 init1: 3545 opt: 3568 Z-score: 1726.0 bits: 330.6 E(32554): 8.1e-90
Smith-Waterman score: 5994; 95.9% identity (95.9% similar) in 908 aa overlap (1-871:1-908)
10 20 30 40 50 60
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB2 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB2 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB2 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB2 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB2 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB2 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB2 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
430 440 450 460 470 480
490 500
pF1KB2 PPPYQEPRPRGNPPHSAPCVPNGSA-----------------------------------
:::::::::::::::::::::::::
CCDS34 PPPYQEPRPRGNPPHSAPCVPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNT
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB2 --YSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGP
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB2 PRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPD
610 620 630 640 650 660
630 640 650 660 670 680
pF1KB2 ATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLED
670 680 690 700 710 720
690 700 710 720 730 740
pF1KB2 KAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTI
730 740 750 760 770 780
750 760 770 780 790 800
pF1KB2 KIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLC
790 800 810 820 830 840
810 820 830 840 850 860
pF1KB2 RAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQ
850 860 870 880 890 900
870
pF1KB2 LHRFLAEDALNTV
::::::::
CCDS34 LHRFLAEDALNTV
910
>>CCDS47396.1 DDR1 gene_id:780|Hs108|chr6 (919 aa)
initn: 5240 init1: 3545 opt: 3568 Z-score: 1726.0 bits: 330.6 E(32554): 8.1e-90
Smith-Waterman score: 5933; 95.3% identity (95.3% similar) in 908 aa overlap (1-865:1-908)
10 20 30 40 50 60
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB2 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB2 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB2 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB2 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB2 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB2 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB2 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
430 440 450 460 470 480
490 500
pF1KB2 PPPYQEPRPRGNPPHSAPCVPNGSA-----------------------------------
:::::::::::::::::::::::::
CCDS47 PPPYQEPRPRGNPPHSAPCVPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNT
490 500 510 520 530 540
510 520 530 540 550 560
pF1KB2 --YSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGP
550 560 570 580 590 600
570 580 590 600 610 620
pF1KB2 PRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPD
610 620 630 640 650 660
630 640 650 660 670
pF1KB2 ATKNA------RNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLS
::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ATKNASFSLFSRNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLS
670 680 690 700 710 720
680 690 700 710 720 730
pF1KB2 AHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLV
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB2 GENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW
790 800 810 820 830 840
800 810 820 830 840 850
pF1KB2 EVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQ
850 860 870 880 890 900
860 870
pF1KB2 RPPFSQLHRFLAEDALNTV
::::::::
CCDS47 RPPFSQLHRFLAEDALNTV
910
>>CCDS75419.1 DDR1 gene_id:780|Hs108|chr6 (767 aa)
initn: 5112 init1: 3138 opt: 3142 Z-score: 1523.6 bits: 292.8 E(32554): 1.5e-78
Smith-Waterman score: 4940; 85.8% identity (86.6% similar) in 876 aa overlap (1-876:1-767)
10 20 30 40 50 60
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTAAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB2 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 HSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB2 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB2 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ELYGCLWRDGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB2 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB2 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB2 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EISFISDVVNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGSPTAILI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB2 GCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPRE
::::::::::::::::::::::::::::: :::
CCDS75 GCLVAIILLLLLIIALMLWRLHWRRLLSK----VLE------------------------
430 440 450
490 500 510 520 530 540
pF1KB2 PPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLLPPPPQNSVPHYAEADIVTL
..:: :.
CCDS75 ----SHPRTRS-------------------------------------------------
550 560 570 580 590 600
pF1KB2 QGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLVS
:: :: : . .: : . . ::::::::::::::
CCDS75 ---------------PGLVGIRP--TPLPVSPMAL-----------VHLCEVDSPQDLVS
460 470 480 490
610 620 630 640 650 660
pF1KB2 LDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPL
500 510 520 530 540 550
670 680 690 700 710 720
pF1KB2 CMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 CMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRYL
560 570 580 590 600 610
730 740 750 760 770 780
pF1KB2 ATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILM
620 630 640 650 660 670
790 800 810 820 830 840
pF1KB2 GKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPACP
680 690 700 710 720 730
850 860 870
pF1KB2 QGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
::::::::::::::::::::::::::::::::::::
CCDS75 QGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
740 750 760
>>CCDS1241.1 DDR2 gene_id:4921|Hs108|chr1 (855 aa)
initn: 3015 init1: 887 opt: 1250 Z-score: 619.4 bits: 125.7 E(32554): 3.5e-28
Smith-Waterman score: 3152; 54.8% identity (75.9% similar) in 887 aa overlap (3-868:5-849)
10 20 30 40 50
pF1KB2 MGPEALSSLLLLLLVASGDADMKGHFDPAKCRYALGMQDRTIPDSDISASSSWSDSTA
:. : :.::: . :. :.. .:: ::: :::. ::: ::.:::.::.:::
CCDS12 MILIPRMLLVLFLLLPILSS---AKAQVNPAICRYPLGMSGGQIPDEDITASSQWSESTA
10 20 30 40 50
60 70 80 90 100 110
pF1KB2 ARHSRLESSDGDGAWCPAGSVFPKE-EEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRS
:...::.: .::::::: : : . .:.::.::. ::...::::::::::: : ::.
CCDS12 AKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB2 YRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVC
:.. ::::: ::..:..: :..:..:: .: . :::: ::.:::.::: : .:. :.::
CCDS12 YKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVTDHSMNVC
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB2 LRVELYGCLWRDGLLSYTAPVGQTMYL--SEAVYLNDSTYDGHTVGGLQYGGLGQLADGV
.:::::::.: :::.::.::.:: . : . .:::::.::: .:: . :::::.:::
CCDS12 MRVELYGCVWLDGLVSYNAPAGQQFVLPGGSIIYLNDSVYDG-AVGYSMTEGLGQLTDGV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB2 VGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGA
::::: ...: .:::::::::: :.: ..::.:. :::::.: : .:.:::::: . :.
CCDS12 SGLDDFTQTHEYHVWPGYDYVGWRNESATNGYIEIMFEFDRIRNFTTMKVHCNNMFAKGV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB2 RLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGP
.. :.: :: . : :: . . : . .: :: :.::: :.: ..:.. ::
CCDS12 KIFKEVQCYFR-SEASEWEPNAISFPLVLDDVNPSARFVTVPLHHRMASAIKCQYHFADT
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB2 WLLFSEISFISDV-VNNSSPALGGTFPPAPWWPPGPPPTNFSSLELEPRGQQPVAKAEGS
:..::::.: ::. . :.: :: : .: . : .:. :.. :
CCDS12 WMMFSEITFQSDAAMYNNSEAL----PTSP---------------MAPTTYDPMLKVDDS
360 370 380 390
420 430 440 450 460 470
pF1KB2 PTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINN
: ::::::::::..:: ::...::: :...: :: ::.:..:.:: ::.:.:. ..::
CCDS12 NTRILIGCLVAIIFILLAIIVIILWRQFWQKMLEKASRRMLDDEMTVSLSLPSDSSMFNN
400 410 420 430 440 450
480 490 500 510
pF1KB2 R--PGPRE-----------P--PPYQEP-RPRGNPPHSAPCVPNGSAYSGDYMEPEKPGA
.: : : : :::: : . :. :: . :. :: ..: .:..
CCDS12 NRSSSPSEQGSNSTYDRIFPLRPDYQEPSRLIRKLPEFAPGEEE-SGCSG-VVKPVQPSG
460 470 480 490 500 510
520 530 540 550 560 570
pF1KB2 PLLPPPPQNSVPHYAEADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVD-FPRSRLRFKE
: ..::::::::::.::::::::::.:::. .. :. :::. : :::
CCDS12 P-------EGVPHYAEADIVNLQGVTGGNTYSVPAVTMDLLSGKDVAVEEFPRKLLTFKE
520 530 540 550 560
580 590 600 610 620 630
pF1KB2 KLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVK
:::::::::::::::.. . . . :: :.: ..:.:::::.:: ::.::::::::::.:
CCDS12 KLGEGQFGEVHLCEVEGMEKFKDKDFALDVSANQPVLVAVKMLRADANKNARNDFLKEIK
570 580 590 600 610 620
640 650 660 670 680 690
pF1KB2 IMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQ
:::::::::::.::.::. ::::::::.:::::::::::: :. : ......
CCDS12 IMSRLKDPNIIHLLAVCITDDPLCMITEYMENGDLNQFLSRHE---------PPNSSSSD
630 640 650 660 670
700 710 720 730 740 750
pF1KB2 GPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAG
:.:: : .:.::::::.::..::::::::::::::::.:.::::::::::::::.:
CCDS12 VRTVSYTNLKFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSG
680 690 700 710 720 730
760 770 780 790 800 810
pF1KB2 DYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVI
::::.:::::::::::.:: ::.::::::::::::::::::.. .:. ::..::.:::::
CCDS12 DYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWETFTFCQEQPYSQLSDEQVI
740 750 760 770 780 790
820 830 840 850 860 870
pF1KB2 ENAGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
::.::::::::::.:: .: ::...:.::: :: :....:: :...: .:
CCDS12 ENTGEFFRDQGRQTYLPQPAICPDSVYKLMLSCWRRDTKNRPSFQEIHLLLLQQGDE
800 810 820 830 840 850
>>CCDS35050.1 NTRK2 gene_id:4915|Hs108|chr9 (822 aa)
initn: 869 init1: 450 opt: 831 Z-score: 419.5 bits: 88.7 E(32554): 4.8e-17
Smith-Waterman score: 860; 47.7% identity (71.2% similar) in 302 aa overlap (570-868:535-807)
540 550 560 570 580 590
pF1KB2 LQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLV
: . .:..:::: ::.: : :
CCDS35 MTKIPVIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAEC-------
510 520 530 540 550
600 610 620 630 640 650
pF1KB2 SLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDP
. : .. . .::::: :. ::. :::.:: .:..... :. .:... ::::. ::
CCDS35 ---YNLCPEQDK-ILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP
560 570 580 590 600 610
660 670 680 690 700 710
pF1KB2 LCMITDYMENGDLNQFLSAHQLEDKA--AEGAPGDGQAAQGPT-ISYPMLLHVAAQIASG
: :. .::..::::.:: :: : . ::: : :: .. ..::.: :::.:
CCDS35 LIMVFEYMKHGDLNKFLRAHG-PDAVLMAEGNP--------PTELTQSQMLHIAQQIAAG
620 630 640 650 660
720 730 740 750 760 770
pF1KB2 MRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWE
: :::. .::::::::::::::::. .::.::::::..:. ::::: :...:::::: :
CCDS35 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE
670 680 690 700 710 720
780 790 800 810 820 830
pF1KB2 CILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRP
:.. :::: ::::..::.:::.. . ::. ::....::: ::: :.::
CCDS35 SIMYRKFTTESDVWSLGVVLWEIFTYGK-QPWYQLSNNEVIECI-----TQGR--VLQRP
730 740 750 760 770
840 850 860 870
pF1KB2 PACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
.::: .::::: ::.:: ..: .. .: .:
CCDS35 RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDILG
780 790 800 810 820
>>CCDS6671.1 NTRK2 gene_id:4915|Hs108|chr9 (838 aa)
initn: 869 init1: 450 opt: 831 Z-score: 419.4 bits: 88.7 E(32554): 4.9e-17
Smith-Waterman score: 860; 47.7% identity (71.2% similar) in 302 aa overlap (570-868:551-823)
540 550 560 570 580 590
pF1KB2 LQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLV
: . .:..:::: ::.: : :
CCDS66 MTKIPVIENPQYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAEC-------
530 540 550 560 570
600 610 620 630 640 650
pF1KB2 SLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDP
. : .. . .::::: :. ::. :::.:: .:..... :. .:... ::::. ::
CCDS66 ---YNLCPEQDK-ILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP
580 590 600 610 620
660 670 680 690 700 710
pF1KB2 LCMITDYMENGDLNQFLSAHQLEDKA--AEGAPGDGQAAQGPT-ISYPMLLHVAAQIASG
: :. .::..::::.:: :: : . ::: : :: .. ..::.: :::.:
CCDS66 LIMVFEYMKHGDLNKFLRAHG-PDAVLMAEGNP--------PTELTQSQMLHIAQQIAAG
630 640 650 660 670
720 730 740 750 760 770
pF1KB2 MRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWE
: :::. .::::::::::::::::. .::.::::::..:. ::::: :...:::::: :
CCDS66 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE
680 690 700 710 720 730
780 790 800 810 820 830
pF1KB2 CILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRP
:.. :::: ::::..::.:::.. . ::. ::....::: ::: :.::
CCDS66 SIMYRKFTTESDVWSLGVVLWEIFTYGK-QPWYQLSNNEVIECI-----TQGR--VLQRP
740 750 760 770 780 790
840 850 860 870
pF1KB2 PACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
.::: .::::: ::.:: ..: .. .: .:
CCDS66 RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLDILG
800 810 820 830
>>CCDS58399.1 NTRK3 gene_id:4916|Hs108|chr15 (817 aa)
initn: 848 init1: 455 opt: 803 Z-score: 406.2 bits: 86.2 E(32554): 2.6e-16
Smith-Waterman score: 837; 46.2% identity (70.9% similar) in 299 aa overlap (570-868:527-802)
540 550 560 570 580 590
pF1KB2 LQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLV
: . .:..:::: ::.: : :
CCDS58 MTRIPVIENPQYFRQGHNCHKPDTYVQHIKRRDIVLKRELGEGAFGKVFLAEC-------
500 510 520 530 540
600 610 620 630 640 650
pF1KB2 SLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDP
. :. : . .::::: :. : : ::.:: .:..... :. .:... ::: . ::
CCDS58 ---YNLSPTKDK-MLVAVKALK-DPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP
550 560 570 580 590 600
660 670 680 690 700 710
pF1KB2 LCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRY
: :. .::..::::.:: :: . : . :. . :.: .. ..::.:.:::::: :
CCDS58 LIMVFEYMKHGDLNKFLRAHGPD--AMILVDGQPRQAKGE-LGLSQMLHIASQIASGMVY
610 620 630 640 650 660
720 730 740 750 760 770
pF1KB2 LATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL
::. .:::::::::::::: :. .::.::::::..:. ::::: :...:::::: : :.
CCDS58 LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM
670 680 690 700 710 720
780 790 800 810 820 830
pF1KB2 MGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPAC
. :::: ::::.::: :::.. . ::. ::.. .::: ::: : :: .:
CCDS58 YRKFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECI-----TQGR--VLERPRVC
730 740 750 760 770
840 850 860 870
pF1KB2 PQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
:. .:..:: ::.:: .:: .......:
CCDS58 PKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATPIYLDILG
780 790 800 810
>>CCDS10340.1 NTRK3 gene_id:4916|Hs108|chr15 (825 aa)
initn: 848 init1: 455 opt: 803 Z-score: 406.1 bits: 86.2 E(32554): 2.7e-16
Smith-Waterman score: 837; 46.2% identity (70.9% similar) in 299 aa overlap (570-868:535-810)
540 550 560 570 580 590
pF1KB2 LQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRLRFKEKLGEGQFGEVHLCEVDSPQDLV
: . .:..:::: ::.: : :
CCDS10 MTRIPVIENPQYFRQGHNCHKPDTYVQHIKRRDIVLKRELGEGAFGKVFLAEC-------
510 520 530 540 550
600 610 620 630 640 650
pF1KB2 SLDFPLNVRKGHPLLVAVKILRPDATKNARNDFLKEVKIMSRLKDPNIIRLLGVCVQDDP
. :. : . .::::: :. : : ::.:: .:..... :. .:... ::: . ::
CCDS10 ---YNLSPTKDK-MLVAVKALK-DPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP
560 570 580 590 600 610
660 670 680 690 700 710
pF1KB2 LCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAAQGPTISYPMLLHVAAQIASGMRY
: :. .::..::::.:: :: . : . :. . :.: .. ..::.:.:::::: :
CCDS10 LIMVFEYMKHGDLNKFLRAHGPD--AMILVDGQPRQAKGE-LGLSQMLHIASQIASGMVY
620 630 640 650 660
720 730 740 750 760 770
pF1KB2 LATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECIL
::. .:::::::::::::: :. .::.::::::..:. ::::: :...:::::: : :.
CCDS10 LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM
670 680 690 700 710 720
780 790 800 810 820 830
pF1KB2 MGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFRDQGRQVYLSRPPAC
. :::: ::::.::: :::.. . ::. ::.. .::: ::: : :: .:
CCDS10 YRKFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECI-----TQGR--VLERPRVC
730 740 750 760 770 780
840 850 860 870
pF1KB2 PQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTV
:. .:..:: ::.:: .:: .......:
CCDS10 PKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATPIYLDILG
790 800 810 820
876 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:07:11 2016 done: Fri Nov 4 02:07:12 2016
Total Scan time: 5.180 Total Display time: 0.270
Function used was FASTA [36.3.4 Apr, 2011]