Result of FASTA (ccds) for
pF1KB0995
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0995, 284 aa
1>>>pF1KB0995 284 - 284 aa - 284 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8032+/-0.0016; mu= -5.1401+/- 0.093
mean_var=369.2060+/-90.495, 0's: 0 Z-trim(107.4): 112 B-trim: 470 in 1/49
Lambda= 0.066748
statistics sampled from 9458 (9553) to 9458 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.293), width: 16
Scan time: 2.250
The best scores are: opt bits E(32554)
CCDS5035.1 FHL5 gene_id:9457|Hs108|chr6 ( 284) 2151 221.2 6.8e-58
CCDS2070.1 FHL2 gene_id:2274|Hs108|chr2 ( 279) 1383 147.2 1.2e-35
CCDS30678.1 FHL3 gene_id:2275|Hs108|chr1 ( 280) 1176 127.3 1.2e-29
CCDS14655.1 FHL1 gene_id:2273|Hs108|chrX ( 280) 1010 111.3 8e-25
CCDS55506.1 FHL1 gene_id:2273|Hs108|chrX ( 296) 1010 111.3 8.3e-25
CCDS55505.1 FHL1 gene_id:2273|Hs108|chrX ( 309) 1010 111.4 8.5e-25
CCDS55507.1 FHL1 gene_id:2273|Hs108|chrX ( 323) 868 97.7 1.1e-20
CCDS76036.1 FHL1 gene_id:2273|Hs108|chrX ( 194) 616 73.2 1.7e-13
CCDS83493.1 FHL1 gene_id:2273|Hs108|chrX ( 210) 616 73.2 1.8e-13
>>CCDS5035.1 FHL5 gene_id:9457|Hs108|chr6 (284 aa)
initn: 2151 init1: 2151 opt: 2151 Z-score: 1152.9 bits: 221.2 E(32554): 6.8e-58
Smith-Waterman score: 2151; 99.6% identity (100.0% similar) in 284 aa overlap (1-284:1-284)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGLTGAKFICF
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS50 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICF
190 200 210 220 230 240
250 260 270 280
pF1KB0 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
::::::::::::::::::::::::::::::::::::::::::::
CCDS50 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
250 260 270 280
>>CCDS2070.1 FHL2 gene_id:2274|Hs108|chr2 (279 aa)
initn: 1798 init1: 1346 opt: 1383 Z-score: 753.3 bits: 147.2 E(32554): 1.2e-35
Smith-Waterman score: 1383; 59.4% identity (85.3% similar) in 278 aa overlap (3-280:2-279)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
: .: :..:. ::.::::.:...:::::.:.. .:.: :::: ::: : ::: ::::
CCDS20 MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
::::.::.:..: .:::.::::::...::::.::::: :::: .::.:::::.::::.::
CCDS20 HWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
. ::::::.:. :.:::::: .: :.. :.::::.::. : : ::: ::.::.:. .:
CCDS20 SSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGLTGAKFICF
::::::.:..:::.: ..: .:::. .:..:. :::.::..:..::::: :.:.: :
CCDS20 PWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISF
180 190 200 210 220 230
250 260 270 280
pF1KB0 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
.. :::..:::: :::.::::.::::. .:.: ::. .
CCDS20 EERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
240 250 260 270
>>CCDS30678.1 FHL3 gene_id:2275|Hs108|chr1 (280 aa)
initn: 1615 init1: 1149 opt: 1176 Z-score: 645.5 bits: 127.3 E(32554): 1.2e-29
Smith-Waterman score: 1176; 48.3% identity (80.1% similar) in 271 aa overlap (6-276:5-275)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
: : :. :: :.::. :..:::: ::: .:.: : ::.. : ::..: :.::
CCDS30 MSESFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
:.:::::.: .:..::...::. .: .:::..:: . ::.: : .:.::::::.:. :
CCDS30 HFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
. ::: ::.: .:.::.:.. .. ....:::::.:..:: : :.:..:.::.:. ::
CCDS30 QTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGLTGAKFICF
::.::..:.::. : .:: :::. :.:. :...:.: :: .:..:: :: :.:.. :
CCDS30 PWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRPIVGLGGGKYVSF
180 190 200 210 220 230
250 260 270 280
pF1KB0 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
.: .:: .::.:..::.::::.::. .. ...:: :
CCDS30 EDRHWHHNCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP
240 250 260 270 280
>>CCDS14655.1 FHL1 gene_id:2273|Hs108|chrX (280 aa)
initn: 1123 init1: 850 opt: 1010 Z-score: 559.1 bits: 111.3 E(32554): 8e-25
Smith-Waterman score: 1010; 43.8% identity (73.9% similar) in 276 aa overlap (6-280:5-280)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
: :.:: : ::::: :: :. :.:. .: : ::.::: .:::.. ::.:
CCDS14 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
::. ::.:.:: : :... :.:::...::..: . : : :: : ..:. :....:.::
CCDS14 FWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
. ::. ::.: ::.: ::: .. : ::: : : .::..: :.:.:::::::. ::
CCDS14 TVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQ
120 130 140 150 160 170
190 200 210 220 230
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGL-TGAKFIC
:: .::.: : : : ..: . .: .:.:::... :.::..:..::.:. :.. .
CCDS14 PWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVVA
180 190 200 210 220 230
240 250 260 270 280
pF1KB0 FQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
.. ..::. ::.: ::::.:..: :. ......: :.. .
CCDS14 YEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
240 250 260 270 280
>>CCDS55506.1 FHL1 gene_id:2273|Hs108|chrX (296 aa)
initn: 1123 init1: 850 opt: 1010 Z-score: 558.8 bits: 111.3 E(32554): 8.3e-25
Smith-Waterman score: 1010; 43.8% identity (73.9% similar) in 276 aa overlap (6-280:21-296)
10 20 30 40
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECK
: :.:: : ::::: :: :. :.:. .: : ::.
CCDS55 MASHRHSGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB0 KPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHC
::: .:::.. ::.: ::. ::.:.:: : :... :.:::...::..: . : : :: :
CCDS55 KPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB0 KRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNF
..:. :....:.::. ::. ::.: ::.: ::: .. : ::: : : .::..:
CCDS55 FKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB0 CKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVAC
:.:.:::::::. :: :: .::.: : : : ..: . .: .:.:::... :.::..:
CCDS55 CNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGC
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB0 SKPISGL-TGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
..::.:. :.. . .. ..::. ::.: ::::.:..: :. ......: :.. .
CCDS55 KNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKKL
250 260 270 280 290
>>CCDS55505.1 FHL1 gene_id:2273|Hs108|chrX (309 aa)
initn: 1123 init1: 850 opt: 1010 Z-score: 558.6 bits: 111.4 E(32554): 8.5e-25
Smith-Waterman score: 1010; 43.8% identity (73.9% similar) in 276 aa overlap (6-280:34-309)
10 20 30
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDR
: :.:: : ::::: :: :. :.:.
CCDS55 YVASLALELIWMLSSPAGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB0 VFSNYCEECKKPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYS
.: : ::.::: .:::.. ::.: ::. ::.:.:: : :... :.:::...::..: .
CCDS55 FCANTCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTT
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB0 NECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCF
: : :: : ..:. :....:.::. ::. ::.: ::.: ::: .. : ::: :
CCDS55 REDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCH
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB0 EKEFAHYCNFCKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYN
: .::..: :.:.:::::::. :: :: .::.: : : : ..: . .: .:.:::.
CCDS55 ETKFAKHCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB0 HLYANKCVACSKPISGL-TGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQ
.. :.::..:..::.:. :.. . .. ..::. ::.: ::::.:..: :. ......:
CCDS55 NFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCP
250 260 270 280 290 300
280
pF1KB0 KCGSGMDTDI
:.. .
CCDS55 DCAKKL
>>CCDS55507.1 FHL1 gene_id:2273|Hs108|chrX (323 aa)
initn: 868 init1: 868 opt: 868 Z-score: 484.5 bits: 97.7 E(32554): 1.1e-20
Smith-Waterman score: 868; 46.9% identity (73.5% similar) in 226 aa overlap (6-231:5-230)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
: :.:: : ::::: :: :. :.:. .: : ::.::: .:::.. ::.:
CCDS55 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
::. ::.:.:: : :... :.:::...::..: . : : :: : ..:. :....:.::
CCDS55 FWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
. ::. ::.: ::.: ::: .. : ::: : : .::..: :.:.:::::::. ::
CCDS55 TVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQDQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGLTGAKFICF
:: .::.: : : : ..: . .: .:.:::... :.::..:..::.:
CCDS55 PWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGKRTVSRVSH
180 190 200 210 220 230
250 260 270 280
pF1KB0 QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI
CCDS55 PVSKARKPPVCHGKRLPLTLFPSANLRGRHPGGERTCPSWVVVLYRKNRSLAAPRGPGLV
240 250 260 270 280 290
>>CCDS76036.1 FHL1 gene_id:2273|Hs108|chrX (194 aa)
initn: 728 init1: 585 opt: 616 Z-score: 355.9 bits: 73.2 E(32554): 1.7e-13
Smith-Waterman score: 616; 46.6% identity (71.8% similar) in 163 aa overlap (6-168:5-167)
10 20 30 40 50 60
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
: :.:: : ::::: :: :. :.:. .: : ::.::: .:::.. ::.:
CCDS76 MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNR
10 20 30 40 50
70 80 90 100 110 120
pF1KB0 HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
::. ::.:.:: : :... :.:::...::..: . : : :: : ..:. :....:.::
CCDS76 FWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB0 NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
. ::. ::.: ::.: ::: .. : ::: : : .::..: :.:
CCDS76 TVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKGLVKAPVWWPMK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB0 LWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVACSKPISGLTGAKFICF
CCDS76 DNPGTTTASTAKNAP
180 190
>>CCDS83493.1 FHL1 gene_id:2273|Hs108|chrX (210 aa)
initn: 728 init1: 585 opt: 616 Z-score: 355.5 bits: 73.2 E(32554): 1.8e-13
Smith-Waterman score: 616; 46.6% identity (71.8% similar) in 163 aa overlap (6-168:21-183)
10 20 30 40
pF1KB0 MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECK
: :.:: : ::::: :: :. :.:. .: : ::.
CCDS83 MASHRHSGPSSYKVGTMAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB0 KPIESDSKDLCYKDRHWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHC
::: .:::.. ::.: ::. ::.:.:: : :... :.:::...::..: . : : :: :
CCDS83 KPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGC
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB0 KRTIMPGSRKMEFKGNYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNF
..:. :....:.::. ::. ::.: ::.: ::: .. : ::: : : .::..:
CCDS83 FKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB0 CKKVITSGGITFCDQLWHKECFLCSGCRKDLCEEQFMSRDDYPFCMDCYNHLYANKCVAC
:.:
CCDS83 CNKGLVKAPVWWPMKDNPGTTTASTAKNAP
190 200 210
284 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:44:06 2016 done: Sat Nov 5 17:44:07 2016
Total Scan time: 2.250 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]