Result of FASTA (omim) for
pF1KB0966
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0966, 427 aa
1>>>pF1KB0966 427 - 427 aa - 427 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6055+/-0.000681; mu= 12.8837+/- 0.042
mean_var=295.3581+/-62.172, 0's: 0 Z-trim(112.7): 2011 B-trim: 168 in 2/47
Lambda= 0.074628
statistics sampled from 19471 (21769) to 19471 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.255), width: 16
Scan time: 8.010
The best scores are: opt bits E(85289)
NP_003426 (OMIM: 604076) zinc finger protein 134 [ ( 427) 3058 343.8 4.9e-94
NP_001252528 (OMIM: 601856) zinc finger protein 21 ( 555) 1538 180.4 1e-44
NP_001252527 (OMIM: 601856) zinc finger protein 21 ( 616) 1538 180.4 1.1e-44
NP_001309235 (OMIM: 601856) zinc finger protein 21 ( 627) 1538 180.5 1.1e-44
NP_001252526 (OMIM: 601856) zinc finger protein 21 ( 629) 1538 180.5 1.1e-44
NP_001252529 (OMIM: 601856) zinc finger protein 21 ( 503) 1536 180.1 1.1e-44
NP_942152 (OMIM: 601856) zinc finger protein 211 i ( 564) 1536 180.2 1.2e-44
NP_006376 (OMIM: 601856) zinc finger protein 211 i ( 577) 1536 180.2 1.2e-44
NP_001316385 (OMIM: 613840) zinc finger protein 30 ( 567) 1290 153.7 1.1e-36
NP_001277248 (OMIM: 613840) zinc finger protein 30 ( 617) 1290 153.7 1.2e-36
NP_065708 (OMIM: 613840) zinc finger protein 304 i ( 659) 1290 153.8 1.2e-36
XP_011525447 (OMIM: 613840) PREDICTED: zinc finger ( 664) 1290 153.8 1.2e-36
NP_001078853 (OMIM: 604085) zinc finger protein 15 ( 437) 1287 153.2 1.2e-36
NP_001277247 (OMIM: 613840) zinc finger protein 30 ( 706) 1290 153.8 1.3e-36
NP_003424 (OMIM: 604074) zinc finger protein 132 [ ( 706) 1251 149.6 2.3e-35
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 1220 146.2 2.2e-34
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 1220 146.2 2.2e-34
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 1220 146.2 2.2e-34
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 1220 146.3 2.3e-34
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 1220 146.3 2.3e-34
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 1220 146.3 2.3e-34
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1220 146.3 2.3e-34
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1220 146.3 2.3e-34
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1220 146.3 2.3e-34
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 1220 146.3 2.3e-34
NP_001273627 (OMIM: 194552) zinc finger protein 79 ( 364) 1211 144.8 3.3e-34
NP_001166303 (OMIM: 612429) zinc finger protein 30 ( 568) 1212 145.3 3.8e-34
NP_443092 (OMIM: 612429) zinc finger protein 300 i ( 604) 1212 145.3 3.9e-34
XP_011536004 (OMIM: 612429) PREDICTED: zinc finger ( 609) 1212 145.3 3.9e-34
NP_001166302 (OMIM: 612429) zinc finger protein 30 ( 620) 1212 145.3 4e-34
XP_016882746 (OMIM: 603977) PREDICTED: zinc finger (1168) 1212 145.8 5.4e-34
NP_009084 (OMIM: 603977) zinc finger protein 208 i (1280) 1212 145.9 5.7e-34
NP_001309189 (OMIM: 194552) zinc finger protein 79 ( 474) 1199 143.8 9.2e-34
NP_001273626 (OMIM: 194552) zinc finger protein 79 ( 474) 1199 143.8 9.2e-34
XP_006717342 (OMIM: 194552) PREDICTED: zinc finger ( 474) 1199 143.8 9.2e-34
NP_001273625 (OMIM: 194552) zinc finger protein 79 ( 474) 1199 143.8 9.2e-34
NP_009066 (OMIM: 194552) zinc finger protein 79 is ( 498) 1199 143.8 9.4e-34
NP_001291422 (OMIM: 194527) zinc finger protein 23 ( 585) 1192 143.2 1.7e-33
NP_001291423 (OMIM: 194527) zinc finger protein 23 ( 585) 1192 143.2 1.7e-33
NP_001291421 (OMIM: 194527) zinc finger protein 23 ( 643) 1192 143.2 1.8e-33
NP_666016 (OMIM: 194527) zinc finger protein 23 is ( 643) 1192 143.2 1.8e-33
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 1192 143.2 1.8e-33
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 1192 143.2 1.8e-33
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 1192 143.2 1.8e-33
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 1192 143.3 1.9e-33
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 1192 143.3 1.9e-33
XP_011525582 (OMIM: 606740) PREDICTED: zinc finger ( 734) 1192 143.3 1.9e-33
XP_011517301 (OMIM: 603132) PREDICTED: zinc finger ( 575) 1187 142.6 2.5e-33
XP_006717343 (OMIM: 603132) PREDICTED: zinc finger ( 584) 1187 142.6 2.5e-33
NP_932094 (OMIM: 603132) zinc finger protein 189 i ( 584) 1187 142.6 2.5e-33
>>NP_003426 (OMIM: 604076) zinc finger protein 134 [Homo (427 aa)
initn: 3058 init1: 3058 opt: 3058 Z-score: 1809.2 bits: 343.8 E(85289): 4.9e-94
Smith-Waterman score: 3058; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427)
10 20 30 40 50 60
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIAVSHVNTSKAGLPAQTALPCDICGPILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIAVSHVNTSKAGLPAQTALPCDICGPILK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 DILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 CGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 FSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 STLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 STLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 AHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQK
370 380 390 400 410 420
pF1KB0 VHTAGRL
:::::::
NP_003 VHTAGRL
>>NP_001252528 (OMIM: 601856) zinc finger protein 211 is (555 aa)
initn: 3469 init1: 1217 opt: 1538 Z-score: 923.8 bits: 180.4 E(85289): 1e-44
Smith-Waterman score: 1538; 51.7% identity (76.0% similar) in 420 aa overlap (8-426:58-470)
10 20 30
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSH
: . ::: :. ::. ::: :: : .
NP_001 EVPSVLHRMFMTPASARWDQRGPGLHEWHLGKGMSSGCWCGVEHEETPSEQRISGERVPQ
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB0 VNTSKAGLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQY
::: : .:.: :.:: .:.::::: :::::. : :::::: .::..::::.:.
NP_001 FRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTCG---KQFYISANLQQH
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB0 QKCYSIEQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSK
:. . : :.: . ::....: : : :::::::.: .:.: :.. .: : ..
NP_001 QRQHITEAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTG
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB0 RKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRK
.: . :.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:.
NP_001 EKPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRR
210 220 230 240 250 260
220 230 240 250 260 270
pF1KB0 ATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLI
.:.:::..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .:
NP_001 CNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLN
270 280 290 300 310 320
280 290 300 310 320 330
pF1KB0 VHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQR
:..::.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::
NP_001 SHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQR
330 340 350 360 370 380
340 350 360 370 380 390
pF1KB0 IHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTG
.:: .: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..::::
NP_001 VHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTG
390 400 410 420 430 440
400 410 420
pF1KB0 ERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::: :.::::..: ::.:. ::.:::. :
NP_001 ERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPY
450 460 470 480 490 500
>--
initn: 1170 init1: 421 opt: 422 Z-score: 274.4 bits: 60.2 E(85289): 1.5e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:473-555)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_001 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
450 460 470 480 490 500
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_001 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
510 520 530 540 550
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_001252527 (OMIM: 601856) zinc finger protein 211 is (616 aa)
initn: 3469 init1: 1217 opt: 1538 Z-score: 923.4 bits: 180.4 E(85289): 1.1e-44
Smith-Waterman score: 1538; 51.7% identity (76.0% similar) in 420 aa overlap (8-426:119-531)
10 20 30
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSH
: . ::: :. ::. ::: :: : .
NP_001 EVPSVLHRMFMTPASARWDQRGPGLHEWHLGKGMSSGCWCGVEHEETPSEQRISGERVPQ
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB0 VNTSKAGLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQY
::: : .:.: :.:: .:.::::: :::::. : :::::: .::..::::.:.
NP_001 FRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTCG---KQFYISANLQQH
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB0 QKCYSIEQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSK
:. . : :.: . ::....: : : :::::::.: .:.: :.. .: : ..
NP_001 QRQHITEAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTG
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB0 RKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRK
.: . :.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:.
NP_001 EKPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRR
270 280 290 300 310 320
220 230 240 250 260 270
pF1KB0 ATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLI
.:.:::..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .:
NP_001 CNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLN
330 340 350 360 370 380
280 290 300 310 320 330
pF1KB0 VHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQR
:..::.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::
NP_001 SHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQR
390 400 410 420 430 440
340 350 360 370 380 390
pF1KB0 IHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTG
.:: .: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..::::
NP_001 VHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTG
450 460 470 480 490 500
400 410 420
pF1KB0 ERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::: :.::::..: ::.:. ::.:::. :
NP_001 ERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPY
510 520 530 540 550 560
>--
initn: 1170 init1: 421 opt: 422 Z-score: 274.0 bits: 60.3 E(85289): 1.6e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:534-616)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_001 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
510 520 530 540 550 560
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_001 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
570 580 590 600 610
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_001309235 (OMIM: 601856) zinc finger protein 211 [H (627 aa)
initn: 3469 init1: 1217 opt: 1538 Z-score: 923.3 bits: 180.5 E(85289): 1.1e-44
Smith-Waterman score: 1538; 51.7% identity (76.0% similar) in 420 aa overlap (8-426:130-542)
10 20 30
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSH
: . ::: :. ::. ::: :: : .
NP_001 EVPSVLHRMFMTPASARWDQRGPGLHEWHLGKGMSSGCWCGVEHEETPSEQRISGERVPQ
100 110 120 130 140 150
40 50 60 70 80 90
pF1KB0 VNTSKAGLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQY
::: : .:.: :.:: .:.::::: :::::. : :::::: .::..::::.:.
NP_001 FRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTCG---KQFYISANLQQH
160 170 180 190 200 210
100 110 120 130 140 150
pF1KB0 QKCYSIEQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSK
:. . : :.: . ::....: : : :::::::.: .:.: :.. .: : ..
NP_001 QRQHITEAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTG
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB0 RKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRK
.: . :.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:.
NP_001 EKPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRR
280 290 300 310 320 330
220 230 240 250 260 270
pF1KB0 ATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLI
.:.:::..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .:
NP_001 CNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLN
340 350 360 370 380 390
280 290 300 310 320 330
pF1KB0 VHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQR
:..::.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::
NP_001 SHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQR
400 410 420 430 440 450
340 350 360 370 380 390
pF1KB0 IHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTG
.:: .: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..::::
NP_001 VHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTG
460 470 480 490 500 510
400 410 420
pF1KB0 ERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::: :.::::..: ::.:. ::.:::. :
NP_001 ERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPY
520 530 540 550 560 570
>--
initn: 1170 init1: 421 opt: 422 Z-score: 273.9 bits: 60.3 E(85289): 1.6e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:545-627)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_001 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
520 530 540 550 560 570
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_001 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
580 590 600 610 620
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_001252526 (OMIM: 601856) zinc finger protein 211 is (629 aa)
initn: 3469 init1: 1217 opt: 1538 Z-score: 923.3 bits: 180.5 E(85289): 1.1e-44
Smith-Waterman score: 1538; 51.7% identity (76.0% similar) in 420 aa overlap (8-426:132-544)
10 20 30
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSH
: . ::: :. ::. ::: :: : .
NP_001 EVPSVLHRMFMTPASARWDQRGPGLHEWHLGKGMSSGCWCGVEHEETPSEQRISGERVPQ
110 120 130 140 150 160
40 50 60 70 80 90
pF1KB0 VNTSKAGLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQY
::: : .:.: :.:: .:.::::: :::::. : :::::: .::..::::.:.
NP_001 FRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTCG---KQFYISANLQQH
170 180 190 200 210
100 110 120 130 140 150
pF1KB0 QKCYSIEQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSK
:. . : :.: . ::....: : : :::::::.: .:.: :.. .: : ..
NP_001 QRQHITEAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTG
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB0 RKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRK
.: . :.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:.
NP_001 EKPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRR
280 290 300 310 320 330
220 230 240 250 260 270
pF1KB0 ATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLI
.:.:::..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .:
NP_001 CNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLN
340 350 360 370 380 390
280 290 300 310 320 330
pF1KB0 VHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQR
:..::.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::
NP_001 SHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQR
400 410 420 430 440 450
340 350 360 370 380 390
pF1KB0 IHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTG
.:: .: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..::::
NP_001 VHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTG
460 470 480 490 500 510
400 410 420
pF1KB0 ERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::: :.::::..: ::.:. ::.:::. :
NP_001 ERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPY
520 530 540 550 560 570
>--
initn: 1170 init1: 421 opt: 422 Z-score: 273.9 bits: 60.3 E(85289): 1.6e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:547-629)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_001 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
520 530 540 550 560 570
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_001 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
580 590 600 610 620
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_001252529 (OMIM: 601856) zinc finger protein 211 is (503 aa)
initn: 3469 init1: 1217 opt: 1536 Z-score: 923.0 bits: 180.1 E(85289): 1.1e-44
Smith-Waterman score: 1536; 52.2% identity (76.6% similar) in 414 aa overlap (14-426:12-418)
10 20 30 40 50
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSHVNTSKAGLPAQTALPCDICGPIL
::: :. ::. ::: :: : . ::: : .:.: :.:: .:
NP_001 MLENFALTSSLGCWCGVEHEETPSEQRISGERVPQFRTSKEGSSSQNADSCEICCLVL
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 KDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNC
.::::: :::::. : ::::: :.::..::::.:.:. . : :.: . ::....:
NP_001 RDILHLAEHQGTNCGQKLHTC---GKQFYISANLQQHQRQHITEAPFRSYVDTASFTQSC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCS
: : :::::::.: .:.: :.. .: : .. .: . :.. . ::.. . :.. .
NP_001 IV----HVSEKPFTCREIRKDFLANMRFLHQDATQTGEKPNNSNKCAVAFYSGKSHHNWG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB0 ECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGK
.:.::::. ::::: ::: . : .:::.:::: .:. .:.:::..:. ::::::.::::
NP_001 KCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCNLIQHQKVHSEERPYECNECGK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB0 TFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRH
:. ... :.:.:::: :: : :::: ::. .: :..::.: :::.:..::: : .
NP_001 FFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB0 KSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDY
.:.:.::. .:::: ::.::.:::::.....:: :::.:: .: :: :::: :::::.
NP_001 RSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB0 IAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQ
: :.:.::::::. ::::::.: ..: . :..:::::::: :.::::..: ::.:. ::
NP_001 IHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQ
360 370 380 390 400 410
420
pF1KB0 KVHTAGRL
.:::. :
NP_001 RVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHT
420 430 440 450 460 470
>--
initn: 1170 init1: 421 opt: 422 Z-score: 274.8 bits: 60.1 E(85289): 1.4e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:421-503)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_001 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
400 410 420 430 440 450
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_001 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
460 470 480 490 500
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_942152 (OMIM: 601856) zinc finger protein 211 isofo (564 aa)
initn: 3469 init1: 1217 opt: 1536 Z-score: 922.6 bits: 180.2 E(85289): 1.2e-44
Smith-Waterman score: 1536; 52.2% identity (76.6% similar) in 414 aa overlap (14-426:73-479)
10 20 30 40
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSHVNTSKA
::: :. ::. ::: :: : . :::
NP_942 SWEEWDLLDEAQKHLYFDVMLENFALTSSLGCWCGVEHEETPSEQRISGERVPQFRTSKE
50 60 70 80 90 100
50 60 70 80 90 100
pF1KB0 GLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSI
: .:.: :.:: .:.::::: :::::. : ::::: :.::..::::.:.:. .
NP_942 GSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTC---GKQFYISANLQQHQRQHIT
110 120 130 140 150
110 120 130 140 150 160
pF1KB0 EQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRS
: :.: . ::....: : : :::::::.: .:.: :.. .: : .. .: . :
NP_942 EAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTGEKPNNS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KB0 TESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQH
.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:. .:.::
NP_942 NKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCNLIQH
220 230 240 250 260 270
230 240 250 260 270 280
pF1KB0 QRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVH
:..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .: :..::
NP_942 QKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVH
280 290 300 310 320 330
290 300 310 320 330 340
pF1KB0 NGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESK
.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::.:: .
NP_942 TGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGER
340 350 360 370 380 390
350 360 370 380 390 400
pF1KB0 PFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYEC
: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..:::::::: :
NP_942 PHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVC
400 410 420 430 440 450
410 420
pF1KB0 SECGKAYSLSSHLNRHQKVHTAGRL
.::::..: ::.:. ::.:::. :
NP_942 GECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYECSECG
460 470 480 490 500 510
>--
initn: 1170 init1: 421 opt: 422 Z-score: 274.4 bits: 60.2 E(85289): 1.5e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:482-564)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_942 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
460 470 480 490 500 510
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_942 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
520 530 540 550 560
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_006376 (OMIM: 601856) zinc finger protein 211 isofo (577 aa)
initn: 3469 init1: 1217 opt: 1536 Z-score: 922.5 bits: 180.2 E(85289): 1.2e-44
Smith-Waterman score: 1536; 52.2% identity (76.6% similar) in 414 aa overlap (14-426:86-492)
10 20 30 40
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISIA-VSHVNTSKA
::: :. ::. ::: :: : . :::
NP_006 SWEEWDLLDEAQKHLYFDVMLENFALTSSLGCWCGVEHEETPSEQRISGERVPQFRTSKE
60 70 80 90 100 110
50 60 70 80 90 100
pF1KB0 GLPAQTALPCDICGPILKDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSI
: .:.: :.:: .:.::::: :::::. : ::::: :.::..::::.:.:. .
NP_006 GSSSQNADSCEICCLVLRDILHLAEHQGTNCGQKLHTC---GKQFYISANLQQHQRQHIT
120 130 140 150 160 170
110 120 130 140 150 160
pF1KB0 EQPLRRDKSEASIVKNCTVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRS
: :.: . ::....: : : :::::::.: .:.: :.. .: : .. .: . :
NP_006 EAPFRSYVDTASFTQSCIV----HVSEKPFTCREIRKDFLANMRFLHQDATQTGEKPNNS
180 190 200 210 220
170 180 190 200 210 220
pF1KB0 TESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQH
.. . ::.. . :.. ..:.::::. ::::: ::: . : .:::.:::: .:. .:.::
NP_006 NKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCNLIQH
230 240 250 260 270 280
230 240 250 260 270 280
pF1KB0 QRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVH
:..:. ::::::.:::: :. ... :.:.:::: :: : :::: ::. .: :..::
NP_006 QKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVH
290 300 310 320 330 340
290 300 310 320 330 340
pF1KB0 NGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESK
.: :::.:..::: : ..:.:.::. .:::: ::.::.:::::.....:: :::.:: .
NP_006 TGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGER
350 360 370 380 390 400
350 360 370 380 390 400
pF1KB0 PFECIECGKFFSRSSDYIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYEC
: :: :::: :::::. : :.:.::::::. ::::::.: ..: . :..:::::::: :
NP_006 PHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVC
410 420 430 440 450 460
410 420
pF1KB0 SECGKAYSLSSHLNRHQKVHTAGRL
.::::..: ::.:. ::.:::. :
NP_006 GECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYECSECG
470 480 490 500 510 520
>--
initn: 1170 init1: 421 opt: 422 Z-score: 274.3 bits: 60.2 E(85289): 1.5e-08
Smith-Waterman score: 422; 60.2% identity (91.6% similar) in 83 aa overlap (177-259:495-577)
150 160 170 180 190 200
pF1KB0 GCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCSECGKAFSRKDTLVQHQRIHSGEKPYEC
.::::.:.:: :..:..: :.:.::.::::
NP_006 PYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNLIKHLRVHTGERPYEC
470 480 490 500 510 520
210 220 230 240 250 260
pF1KB0 SECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSRKDNLTQHKRIHTGEMPYKCNECG
:::::.::....:.::.:.:::.:::.::.:::.:. :. : ::.:.: :: :
NP_006 SECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQRVHIGEKP
530 540 550 560 570
270 280 290 300 310 320
pF1KB0 KYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKSFG
>>NP_001316385 (OMIM: 613840) zinc finger protein 304 is (567 aa)
initn: 3701 init1: 1287 opt: 1290 Z-score: 779.4 bits: 153.7 E(85289): 1.1e-36
Smith-Waterman score: 1371; 50.9% identity (71.2% similar) in 393 aa overlap (51-426:102-493)
30 40 50 60 70
pF1KB0 DEESSSEQSISIAVSHVNTSKAGLPAQTALPC--DICGPILKDILHLDEHQGTHHGLKLH
:: : . : .::: . : :
NP_001 GRSFTCREEGMDLPDSSGLFQHQTTYNRVSPCRRTECMESFPHSSSLRQHQGDYDGQMLF
80 90 100 110 120 130
80 90 100 110 120 130
pF1KB0 TCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNCTV---SKEPHPSEKPFTCK
.:: :. : . .: . : .. .:.: ... :. .. .. : .: .::
NP_001 SCGDEGKAFLDTFTLLDSQMTHAEVRPFRCLPC-GNVFKEKSALINHRKIHSGEISHVCK
140 150 160 170 180 190
140 150 160 170 180
pF1KB0 EEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAF------------HGEQMHYKCSECGK
: : : ... .:. .. . .: : :: : . : ::::::
NP_001 ECGKAFIHLHHLKMHQKFHTGKRHYTCSECGKAFSRKDTLVQHQRVHTGERSYDCSECGK
200 210 220 230 240 250
190 200 210 220 230 240
pF1KB0 AFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSR
:.::.. ::::::::.::.::.:..:::::::: :::::::.:::::::::::::: ::.
NP_001 AYSRSSHLVQHQRIHTGERPYKCNKCGKAFSRKDTLVQHQRFHTGERPYECSECGKFFSQ
260 270 280 290 300 310
250 260 270 280 290 300
pF1KB0 KDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTL
...: .: ::::: ::.: ::::.:::.:.:: :.:::.::: : :: :::.: :.::
NP_001 SSHLIEHWRIHTGARPYECIECGKFFSHNSSLIKHRRVHTGARSYVCSKCGKAFGCKDTL
320 330 340 350 360 370
310 320 330 340 350 360
pF1KB0 VQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYIAHQ
:::. :::: ::.::.:::.:..: ::..::.::: .:.:: :::::::.::. :.::
NP_001 VQHQIIHTGARPYECSECGKAFSRKDTLVQHQKIHTGERPYECGECGKFFSHSSNLIVHQ
380 390 400 410 420 430
370 380 390 400 410 420
pF1KB0 RVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQKVHT
:.::: .:. :..::: : ..: :. ::::::: ::: :::::::: :::: .:.::::
NP_001 RIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHLVQHKKVHT
440 450 460 470 480 490
pF1KB0 AGRL
..:
NP_001 GARPYECSECGKFFSRNSGLILHQRVHTGEKPYVCSECGKAYSRSSHLVRHQKAHTGERA
500 510 520 530 540 550
>--
initn: 612 init1: 332 opt: 348 Z-score: 231.3 bits: 52.3 E(85289): 3.8e-06
Smith-Waterman score: 348; 63.0% identity (80.8% similar) in 73 aa overlap (343-415:494-566)
320 330 340 350 360 370
pF1KB0 ENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPF
:.:: ::::::::.: : ::::::::.:.
NP_001 ARPYVCSECGKAYISSSHLVQHKKVHTGARPYECSECGKFFSRNSGLILHQRVHTGEKPY
470 480 490 500 510 520
380 390 400 410 420
pF1KB0 VCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::.::: . :.:::::::..::::: .::. : . : .:
NP_001 VCSECGKAYSRSSHLVRHQKAHTGERAHECNSFGGPLAASLKLV
530 540 550 560
>>NP_001277248 (OMIM: 613840) zinc finger protein 304 is (617 aa)
initn: 3701 init1: 1287 opt: 1290 Z-score: 779.1 bits: 153.7 E(85289): 1.2e-36
Smith-Waterman score: 1371; 50.9% identity (71.2% similar) in 393 aa overlap (51-426:152-543)
30 40 50 60 70
pF1KB0 DEESSSEQSISIAVSHVNTSKAGLPAQTALPC--DICGPILKDILHLDEHQGTHHGLKLH
:: : . : .::: . : :
NP_001 GRSFTCREEGMDLPDSSGLFQHQTTYNRVSPCRRTECMESFPHSSSLRQHQGDYDGQMLF
130 140 150 160 170 180
80 90 100 110 120 130
pF1KB0 TCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNCTV---SKEPHPSEKPFTCK
.:: :. : . .: . : .. .:.: ... :. .. .. : .: .::
NP_001 SCGDEGKAFLDTFTLLDSQMTHAEVRPFRCLPC-GNVFKEKSALINHRKIHSGEISHVCK
190 200 210 220 230 240
140 150 160 170 180
pF1KB0 EEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAF------------HGEQMHYKCSECGK
: : : ... .:. .. . .: : :: : . : ::::::
NP_001 ECGKAFIHLHHLKMHQKFHTGKRHYTCSECGKAFSRKDTLVQHQRVHTGERSYDCSECGK
250 260 270 280 290 300
190 200 210 220 230 240
pF1KB0 AFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGKTFSR
:.::.. ::::::::.::.::.:..:::::::: :::::::.:::::::::::::: ::.
NP_001 AYSRSSHLVQHQRIHTGERPYKCNKCGKAFSRKDTLVQHQRFHTGERPYECSECGKFFSQ
310 320 330 340 350 360
250 260 270 280 290 300
pF1KB0 KDNLTQHKRIHTGEMPYKCNECGKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTL
...: .: ::::: ::.: ::::.:::.:.:: :.:::.::: : :: :::.: :.::
NP_001 SSHLIEHWRIHTGARPYECIECGKFFSHNSSLIKHRRVHTGARSYVCSKCGKAFGCKDTL
370 380 390 400 410 420
310 320 330 340 350 360
pF1KB0 VQHESIHTGENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYIAHQ
:::. :::: ::.::.:::.:..: ::..::.::: .:.:: :::::::.::. :.::
NP_001 VQHQIIHTGARPYECSECGKAFSRKDTLVQHQKIHTGERPYECGECGKFFSHSSNLIVHQ
430 440 450 460 470 480
370 380 390 400 410 420
pF1KB0 RVHTGERPFVCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQKVHT
:.::: .:. :..::: : ..: :. ::::::: ::: :::::::: :::: .:.::::
NP_001 RIHTGAKPYECNECGKCFSHNSSLILHQRVHTGARPYVCSECGKAYISSSHLVQHKKVHT
490 500 510 520 530 540
pF1KB0 AGRL
..:
NP_001 GARPYECSECGKFFSRNSGLILHQRVHTGEKPYVCSECGKAYSRSSHLVRHQKAHTGERA
550 560 570 580 590 600
>--
initn: 323 init1: 294 opt: 379 Z-score: 249.0 bits: 55.7 E(85289): 4e-07
Smith-Waterman score: 379; 45.1% identity (70.8% similar) in 144 aa overlap (14-156:12-149)
10 20 30 40 50
pF1KB0 MTLVTAGGAWTGPGCWHEVKDEESSSEQSISI-AVSHVNTSKAGLPAQTALPCDICGPIL
: : :. ..:. ::::.:. .::.: :...:: : : ::..: :.:
NP_001 MLENFALVATLGFWCEA-EHEAPSEQSVSVEGVSQVRTAESGL-FQKAHPCEMCDPLL
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 KDILHLDEHQGTHHGLKLHTCGACGRQFWFSANLHQYQKCYSIEQPLRRDKSEASIVKNC
:::::: ::::.: :: : : : :.: ::::..:.:: .. :. .: : . ::.::.:
NP_001 KDILHLAEHQGSHLTQKLCTRGLCRRRFSFSANFYQHQKQHNGENCFRGDDGGASFVKSC
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 TVSKEPHPSEKPFTCKEEQKNFQATLGGCQQKAIHSKRKTHRSTESGDAFHGEQMHYKCS
:: : . :::.:: .. . : :... ...
NP_001 TV----HMLGRSFTCREEGMDLPDSSGLFQHQTTYNRVSPCRRTECMESFPHSSSLRQHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB0 ECGKAFSRKDTLVQHQRIHSGEKPYECSECGKAFSRKATLVQHQRIHTGERPYECSECGK
NP_001 GDYDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVRPFRCLPCGNVFKEKSALINHRKIHS
180 190 200 210 220 230
>--
initn: 612 init1: 332 opt: 348 Z-score: 230.9 bits: 52.3 E(85289): 4e-06
Smith-Waterman score: 348; 63.0% identity (80.8% similar) in 73 aa overlap (343-415:544-616)
320 330 340 350 360 370
pF1KB0 ENPYDCSDCGKSFGHKYTLIKHQRIHTESKPFECIECGKFFSRSSDYIAHQRVHTGERPF
:.:: ::::::::.: : ::::::::.:.
NP_001 ARPYVCSECGKAYISSSHLVQHKKVHTGARPYECSECGKFFSRNSGLILHQRVHTGEKPY
520 530 540 550 560 570
380 390 400 410 420
pF1KB0 VCSKCGKDFIRTSHLVRHQRVHTGERPYECSECGKAYSLSSHLNRHQKVHTAGRL
:::.::: . :.:::::::..::::: .::. : . : .:
NP_001 VCSECGKAYSRSSHLVRHQKAHTGERAHECNSFGGPLAASLKLV
580 590 600 610
427 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:18:34 2016 done: Sat Nov 5 22:18:36 2016
Total Scan time: 8.010 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]