Result of FASTA (ccds) for
pF1KB0473
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0473, 499 aa
1>>>pF1KB0473 499 - 499 aa - 499 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2701+/-0.00108; mu= 7.1650+/- 0.066
mean_var=266.6230+/-56.600, 0's: 0 Z-trim(111.8): 86 B-trim: 0 in 0/54
Lambda= 0.078546
statistics sampled from 12621 (12701) to 12621 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.39), width: 16
Scan time: 3.720
The best scores are: opt bits E(32554)
CCDS59514.1 PUF60 gene_id:22827|Hs108|chr8 ( 499) 3216 377.9 1.4e-104
CCDS59515.1 PUF60 gene_id:22827|Hs108|chr8 ( 513) 3216 377.9 1.4e-104
CCDS47933.1 PUF60 gene_id:22827|Hs108|chr8 ( 542) 3216 378.0 1.5e-104
CCDS47935.1 PUF60 gene_id:22827|Hs108|chr8 ( 516) 2872 338.9 7.8e-93
CCDS59516.1 PUF60 gene_id:22827|Hs108|chr8 ( 530) 2872 339.0 7.9e-93
CCDS47934.1 PUF60 gene_id:22827|Hs108|chr8 ( 559) 2872 339.0 8.2e-93
>>CCDS59514.1 PUF60 gene_id:22827|Hs108|chr8 (499 aa)
initn: 3216 init1: 3216 opt: 3216 Z-score: 1991.0 bits: 377.9 E(32554): 1.4e-104
Smith-Waterman score: 3216; 100.0% identity (100.0% similar) in 499 aa overlap (1-499:1-499)
10 20 30 40 50 60
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 RQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 EAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 DIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 KAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 AQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 AQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 EEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 GEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR
430 440 450 460 470 480
490
pF1KB0 KVVAEVYDQERFDNSDLSA
:::::::::::::::::::
CCDS59 KVVAEVYDQERFDNSDLSA
490
>>CCDS59515.1 PUF60 gene_id:22827|Hs108|chr8 (513 aa)
initn: 3216 init1: 3216 opt: 3216 Z-score: 1990.9 bits: 377.9 E(32554): 1.4e-104
Smith-Waterman score: 3216; 100.0% identity (100.0% similar) in 499 aa overlap (1-499:15-513)
10 20 30 40
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIA
::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MATATIALGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB0 HQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 HQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB0 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFN
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB0 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB0 MNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB0 TLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILAS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB0 PPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB0 RNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETH
430 440 450 460 470 480
470 480 490
pF1KB0 KAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
:::::::::::::::::::::::::::::::::
CCDS59 KAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
490 500 510
>>CCDS47933.1 PUF60 gene_id:22827|Hs108|chr8 (542 aa)
initn: 3216 init1: 3216 opt: 3216 Z-score: 1990.6 bits: 378.0 E(32554): 1.5e-104
Smith-Waterman score: 3216; 100.0% identity (100.0% similar) in 499 aa overlap (1-499:44-542)
10 20 30
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKY
::::::::::::::::::::::::::::::
CCDS47 QGGGSEPAAAAAVVAAGDKWKPPQGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKY
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB0 AMEQSIKSVLVKQTIAHQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AMEQSIKSVLVKQTIAHQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB0 PFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 AQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYG
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB0 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAAT
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB0 AKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPI
320 330 340 350 360 370
340 350 360 370 380 390
pF1KB0 PVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHM
380 390 400 410 420 430
400 410 420 430 440 450
pF1KB0 VMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAE
440 450 460 470 480 490
460 470 480 490
pF1KB0 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
500 510 520 530 540
>>CCDS47935.1 PUF60 gene_id:22827|Hs108|chr8 (516 aa)
initn: 2867 init1: 2867 opt: 2872 Z-score: 1780.2 bits: 338.9 E(32554): 7.8e-93
Smith-Waterman score: 3172; 96.7% identity (96.7% similar) in 516 aa overlap (1-499:1-516)
10 20 30 40 50
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAV
10 20 30 40 50 60
60 70 80 90 100
pF1KB0 ----------------QRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD
::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB0 SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEAR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB0 AFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB0 VSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB0 VLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPI
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB0 LASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTV
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB0 MVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIAS
430 440 450 460 470 480
470 480 490
pF1KB0 ETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
::::::::::::::::::::::::::::::::::::
CCDS47 ETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
490 500 510
>>CCDS59516.1 PUF60 gene_id:22827|Hs108|chr8 (530 aa)
initn: 2867 init1: 2867 opt: 2872 Z-score: 1780.1 bits: 339.0 E(32554): 7.9e-93
Smith-Waterman score: 3172; 96.7% identity (96.7% similar) in 516 aa overlap (1-499:15-530)
10 20 30 40
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIA
::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MATATIALGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTIA
10 20 30 40 50 60
50 60 70 80
pF1KB0 HQQQQLTNLQMAA-----------------QRQRALAIMCRVYVGSIYYELGEDTIRQAF
::::::::::::: ::::::::::::::::::::::::::::::
CCDS59 HQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAF
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB0 APFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 APFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIG
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB0 QAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGY
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB0 GFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAA
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB0 TAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPP
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB0 IPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 IPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLSEQEHMSISGSSARH
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB0 MVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDA
430 440 450 460 470 480
450 460 470 480 490
pF1KB0 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
490 500 510 520 530
>>CCDS47934.1 PUF60 gene_id:22827|Hs108|chr8 (559 aa)
initn: 2867 init1: 2867 opt: 2872 Z-score: 1779.8 bits: 339.0 E(32554): 8.2e-93
Smith-Waterman score: 3172; 96.7% identity (96.7% similar) in 516 aa overlap (1-499:44-559)
10 20 30
pF1KB0 MENGQSTAAKLGLPPLTPEQQEALQKAKKY
::::::::::::::::::::::::::::::
CCDS47 QGGGSEPAAAAAVVAAGDKWKPPQGTDSIKMENGQSTAAKLGLPPLTPEQQEALQKAKKY
20 30 40 50 60 70
40 50 60 70
pF1KB0 AMEQSIKSVLVKQTIAHQQQQLTNLQMAA-----------------QRQRALAIMCRVYV
::::::::::::::::::::::::::::: ::::::::::::::
CCDS47 AMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYV
80 90 100 110 120 130
80 90 100 110 120 130
pF1KB0 GSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSV
140 150 160 170 180 190
140 150 160 170 180 190
pF1KB0 MLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIK
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB0 SCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPA
260 270 280 290 300 310
260 270 280 290 300 310
pF1KB0 TPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMA
320 330 340 350 360 370
320 330 340 350 360 370
pF1KB0 AQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEM
380 390 400 410 420 430
380 390 400 410 420 430
pF1KB0 LSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAV
440 450 460 470 480 490
440 450 460 470 480 490
pF1KB0 NRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQERFD
500 510 520 530 540 550
pF1KB0 NSDLSA
::::::
CCDS47 NSDLSA
499 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:02:56 2016 done: Sat Nov 5 17:02:57 2016
Total Scan time: 3.720 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]