Result of FASTA (omim) for
pF1KB0438
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0438, 869 aa
1>>>pF1KB0438 869 - 869 aa - 869 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2087+/-0.000341; mu= 3.4125+/- 0.021
mean_var=216.2591+/-43.903, 0's: 0 Z-trim(122.0): 18 B-trim: 356 in 1/58
Lambda= 0.087214
statistics sampled from 39447 (39465) to 39447 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.463), width: 16
Scan time: 16.000
The best scores are: opt bits E(85289)
NP_005670 (OMIM: 604905) TATA box-binding protein- ( 869) 6076 777.7 0
XP_005256283 (OMIM: 604905) PREDICTED: TATA box-bi ( 869) 6065 776.3 0
XP_006721388 (OMIM: 604905) PREDICTED: TATA box-bi ( 870) 6065 776.3 0
XP_005256284 (OMIM: 604905) PREDICTED: TATA box-bi ( 802) 5591 716.7 1.1e-205
XP_016879335 (OMIM: 604905) PREDICTED: TATA box-bi ( 802) 5591 716.7 1.1e-205
XP_016879336 (OMIM: 604905) PREDICTED: TATA box-bi ( 776) 3937 508.5 4.7e-143
XP_016879334 (OMIM: 604905) PREDICTED: TATA box-bi ( 843) 3937 508.6 5.1e-143
NP_001230085 (OMIM: 604905) TATA box-binding prote ( 843) 3937 508.6 5.1e-143
XP_006721389 (OMIM: 604905) PREDICTED: TATA box-bi ( 844) 3937 508.6 5.1e-143
NP_647610 (OMIM: 604905) TATA box-binding protein- ( 775) 3917 506.0 2.7e-142
XP_016879337 (OMIM: 604905) PREDICTED: TATA box-bi ( 537) 3747 484.5 5.5e-136
NP_001230087 (OMIM: 604905) TATA box-binding prote ( 537) 3747 484.5 5.5e-136
NP_001230086 (OMIM: 604905) TATA box-binding prote ( 537) 3747 484.5 5.5e-136
NP_001230088 (OMIM: 604905) TATA box-binding prote ( 460) 3210 416.9 1.1e-115
NP_001230089 (OMIM: 604905) TATA box-binding prote ( 392) 2721 355.3 3.1e-97
>>NP_005670 (OMIM: 604905) TATA box-binding protein-asso (869 aa)
initn: 6076 init1: 6076 opt: 6076 Z-score: 4143.0 bits: 777.7 E(85289): 0
Smith-Waterman score: 6076; 100.0% identity (100.0% similar) in 869 aa overlap (1-869:1-869)
10 20 30 40 50 60
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
790 800 810 820 830 840
850 860
pF1KB0 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
:::::::::::::::::::::::::::::
NP_005 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
850 860
>>XP_005256283 (OMIM: 604905) PREDICTED: TATA box-bindin (869 aa)
initn: 6065 init1: 6065 opt: 6065 Z-score: 4135.5 bits: 776.3 E(85289): 0
Smith-Waterman score: 6065; 99.9% identity (99.9% similar) in 869 aa overlap (1-869:1-869)
10 20 30 40 50 60
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
XP_005 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
790 800 810 820 830 840
850 860
pF1KB0 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
:::::::::::::::::::::::::::::
XP_005 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
850 860
>>XP_006721388 (OMIM: 604905) PREDICTED: TATA box-bindin (870 aa)
initn: 6065 init1: 6065 opt: 6065 Z-score: 4135.5 bits: 776.3 E(85289): 0
Smith-Waterman score: 6065; 99.9% identity (99.9% similar) in 869 aa overlap (1-869:2-870)
10 20 30 40 50
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 PATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAF
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_006 PATPGPLPMLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 APLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB0 PILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB0 LHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB0 PFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSG
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB0 AVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGC
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB0 GLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLK
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB0 WNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSR
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB0 IDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQL
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB0 RPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFT
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB0 HRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSE
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB0 RLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPE
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB0 WPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQ
790 800 810 820 830 840
840 850 860
pF1KB0 ASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::
XP_006 ASSVRATRSQQHTPVLSSSQPLRKKPRMGF
850 860 870
>>XP_005256284 (OMIM: 604905) PREDICTED: TATA box-bindin (802 aa)
initn: 5591 init1: 5591 opt: 5591 Z-score: 3813.7 bits: 716.7 E(85289): 1.1e-205
Smith-Waterman score: 5591; 99.9% identity (99.9% similar) in 802 aa overlap (68-869:1-802)
40 50 60 70 80 90
pF1KB0 PEAQPQNSENGALHVTKDLLWEPATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRP
::::::::::::::::::::::: ::::::
XP_005 MLPPLIDPWDPGLTARDLLFRGGCRYRKRP
10 20 30
100 110 120 130 140 150
pF1KB0 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB0 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB0 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB0 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB0 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB0 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB0 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB0 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB0 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
520 530 540 550 560 570
640 650 660 670 680 690
pF1KB0 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
580 590 600 610 620 630
700 710 720 730 740 750
pF1KB0 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
640 650 660 670 680 690
760 770 780 790 800 810
pF1KB0 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
700 710 720 730 740 750
820 830 840 850 860
pF1KB0 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
760 770 780 790 800
>>XP_016879335 (OMIM: 604905) PREDICTED: TATA box-bindin (802 aa)
initn: 5591 init1: 5591 opt: 5591 Z-score: 3813.7 bits: 716.7 E(85289): 1.1e-205
Smith-Waterman score: 5591; 99.9% identity (99.9% similar) in 802 aa overlap (68-869:1-802)
40 50 60 70 80 90
pF1KB0 PEAQPQNSENGALHVTKDLLWEPATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRP
::::::::::::::::::::::: ::::::
XP_016 MLPPLIDPWDPGLTARDLLFRGGCRYRKRP
10 20 30
100 110 120 130 140 150
pF1KB0 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB0 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB0 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB0 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB0 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB0 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB0 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB0 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB0 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
520 530 540 550 560 570
640 650 660 670 680 690
pF1KB0 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
580 590 600 610 620 630
700 710 720 730 740 750
pF1KB0 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
640 650 660 670 680 690
760 770 780 790 800 810
pF1KB0 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
700 710 720 730 740 750
820 830 840 850 860
pF1KB0 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
760 770 780 790 800
>>XP_016879336 (OMIM: 604905) PREDICTED: TATA box-bindin (776 aa)
initn: 5380 init1: 3937 opt: 3937 Z-score: 2689.2 bits: 508.5 E(85289): 4.7e-143
Smith-Waterman score: 5332; 96.5% identity (96.6% similar) in 802 aa overlap (68-869:1-776)
40 50 60 70 80 90
pF1KB0 PEAQPQNSENGALHVTKDLLWEPATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRP
::::::::::::::::::::::: ::::::
XP_016 MLPPLIDPWDPGLTARDLLFRGGCRYRKRP
10 20 30
100 110 120 130 140 150
pF1KB0 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB0 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB0 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB0 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
::. :::::::::::::::::::::::::::::::
XP_016 GET--------------------------LLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
220 230 240
340 350 360 370 380 390
pF1KB0 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
250 260 270 280 290 300
400 410 420 430 440 450
pF1KB0 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
310 320 330 340 350 360
460 470 480 490 500 510
pF1KB0 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
370 380 390 400 410 420
520 530 540 550 560 570
pF1KB0 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
430 440 450 460 470 480
580 590 600 610 620 630
pF1KB0 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
490 500 510 520 530 540
640 650 660 670 680 690
pF1KB0 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
550 560 570 580 590 600
700 710 720 730 740 750
pF1KB0 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
610 620 630 640 650 660
760 770 780 790 800 810
pF1KB0 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
670 680 690 700 710 720
820 830 840 850 860
pF1KB0 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
730 740 750 760 770
>>XP_016879334 (OMIM: 604905) PREDICTED: TATA box-bindin (843 aa)
initn: 5854 init1: 3937 opt: 3937 Z-score: 2688.7 bits: 508.6 E(85289): 5.1e-143
Smith-Waterman score: 5806; 96.8% identity (96.9% similar) in 869 aa overlap (1-869:1-843)
10 20 30 40 50 60
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
XP_016 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
:::::::::::::::::::::::::::::::::::::::.
XP_016 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGET--------------------
250 260 270 280
310 320 330 340 350 360
pF1KB0 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ------LLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
290 300 310 320 330
370 380 390 400 410 420
pF1KB0 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB0 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB0 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB0 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB0 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB0 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB0 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
700 710 720 730 740 750
790 800 810 820 830 840
pF1KB0 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
760 770 780 790 800 810
850 860
pF1KB0 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
:::::::::::::::::::::::::::::
XP_016 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
820 830 840
>>NP_001230085 (OMIM: 604905) TATA box-binding protein-a (843 aa)
initn: 5865 init1: 3937 opt: 3937 Z-score: 2688.7 bits: 508.6 E(85289): 5.1e-143
Smith-Waterman score: 5817; 96.9% identity (97.0% similar) in 869 aa overlap (1-869:1-843)
10 20 30 40 50 60
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAFA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPGP
:::::::::::::::::::::::::::::::::::::::.
NP_001 HFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGET--------------------
250 260 270 280
310 320 330 340 350 360
pF1KB0 FHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ------LLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSGA
290 300 310 320 330
370 380 390 400 410 420
pF1KB0 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGCG
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB0 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKW
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB0 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRI
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB0 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLR
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB0 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTH
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB0 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSER
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB0 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEW
700 710 720 730 740 750
790 800 810 820 830 840
pF1KB0 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQA
760 770 780 790 800 810
850 860
pF1KB0 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
:::::::::::::::::::::::::::::
NP_001 SSVRATRSQQHTPVLSSSQPLRKKPRMGF
820 830 840
>>XP_006721389 (OMIM: 604905) PREDICTED: TATA box-bindin (844 aa)
initn: 5854 init1: 3937 opt: 3937 Z-score: 2688.7 bits: 508.6 E(85289): 5.1e-143
Smith-Waterman score: 5806; 96.8% identity (96.9% similar) in 869 aa overlap (1-869:2-844)
10 20 30 40 50
pF1KB0 MDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMDFPSSLRPALFLTGPLGLSDVPDLSFMCSWRDALTLPEAQPQNSENGALHVTKDLLWE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 PATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRPRVVLDVTEQISRFLLDHGDVAF
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_006 PATPGPLPMLPPLIDPWDPGLTARDLLFRGGCRYRKRPRVVLDVTEQISRFLLDHGDVAF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 APLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB0 PILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGAQDR
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB0 LHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGESKALIYTFLPHWLTCYLTPG
::::::::::::::::::::::::::::::::::::::::.
XP_006 LHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQGET-------------------
250 260 270 280
300 310 320 330 340 350
pF1KB0 PFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSG
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 -------LLAVRSDYHCAVWKFGKQWQPTLLQAMQVEKGATGISLSPHLPGELAICSRSG
290 300 310 320 330
360 370 380 390 400 410
pF1KB0 AVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHPRVLTVGDRTGVKMLDTQGPPGC
340 350 360 370 380 390
420 430 440 450 460 470
pF1KB0 GLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLK
400 410 420 430 440 450
480 490 500 510 520 530
pF1KB0 WNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSR
460 470 480 490 500 510
540 550 560 570 580 590
pF1KB0 IDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQL
520 530 540 550 560 570
600 610 620 630 640 650
pF1KB0 RPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFT
580 590 600 610 620 630
660 670 680 690 700 710
pF1KB0 HRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSE
640 650 660 670 680 690
720 730 740 750 760 770
pF1KB0 RLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPE
700 710 720 730 740 750
780 790 800 810 820 830
pF1KB0 WPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRDYMAKLPPQRDTPGCATTPPHSQ
760 770 780 790 800 810
840 850 860
pF1KB0 ASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::
XP_006 ASSVRATRSQQHTPVLSSSQPLRKKPRMGF
820 830 840
>>NP_647610 (OMIM: 604905) TATA box-binding protein-asso (775 aa)
initn: 3886 init1: 2432 opt: 3917 Z-score: 2675.6 bits: 506.0 E(85289): 2.7e-142
Smith-Waterman score: 5323; 96.5% identity (96.6% similar) in 802 aa overlap (68-869:1-775)
40 50 60 70 80 90
pF1KB0 PEAQPQNSENGALHVTKDLLWEPATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRKRP
::::::::::::::::::::::::::::::
NP_647 MLPPLIDPWDPGLTARDLLFRGGYRYRKRP
10 20 30
100 110 120 130 140 150
pF1KB0 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 RVVLDVTEQISRFLLDHGDVAFAPLGKLMLENFKLEGAGSRTKKKTVVSVKKLLQDLGGH
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB0 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 QPWGCPWAYLSNRQRRFSILGGPILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB0 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 WVPGRTPQFGQLVYPAGGAQDRLHFQEVVLTPGDNPQFLGKPGRIQLQGPVRQVVTCTVQ
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB0 GESKALIYTFLPHWLTCYLTPGPFHPSSALLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
::. :::::::::::::::::::::::::::::::
NP_647 GET--------------------------LLAVRSDYHCAVWKFGKQWQPTLLQAMQVEK
220 230 240
340 350 360 370 380 390
pF1KB0 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 GATGISLSPHLPGELAICSRSGAVCLWSPEDGLRQIYRDPETLVFRDSSSWRWADFTAHP
250 260 270 280 290 300
400 410 420 430 440 450
pF1KB0 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 RVLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLGHSSPKCLPPTLH
310 320 330 340 350 360
460 470 480 490 500 510
pF1KB0 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 LVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPLLLGGQGGQLQLL
370 380 390 400 410 420
520 530 540 550 560 570
pF1KB0 HLAGEGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 HLA-EGASVPRLAGPPQSLPSRIDSLPAFPLLEPKIQWRLQERLKAPTIGLAAVVPPLPS
430 440 450 460 470 480
580 590 600 610 620 630
pF1KB0 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 APTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPTASWTSQDTAGCS
490 500 510 520 530 540
640 650 660 670 680 690
pF1KB0 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 QWLKALLKVPLAPPVWTAPTFTHRQMLGSTELRREEEEGQRLGVLRKAMARGQLLLQRDL
550 560 570 580 590 600
700 710 720 730 740 750
pF1KB0 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 GSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGRQTRRPKRRTQLS
610 620 630 640 650 660
760 770 780 790 800 810
pF1KB0 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 SSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQELTPDACAQGVPSEQRQMLRD
670 680 690 700 710 720
820 830 840 850 860
pF1KB0 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 YMAKLPPQRDTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPRMGF
730 740 750 760 770
869 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:53:24 2016 done: Sat Nov 5 11:53:26 2016
Total Scan time: 16.000 Total Display time: 0.290
Function used was FASTA [36.3.4 Apr, 2011]