Result of FASTA (ccds) for
pF1KB0432
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0432, 854 aa
1>>>pF1KB0432 854 - 854 aa - 854 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.7517+/-0.00132; mu= -18.0816+/- 0.079
mean_var=815.9364+/-172.389, 0's: 0 Z-trim(116.4): 579 B-trim: 1017 in 1/54
Lambda= 0.044900
statistics sampled from 16375 (16985) to 16375 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.522), width: 16
Scan time: 5.370
The best scores are: opt bits E(32554)
CCDS74719.1 ZNF341 gene_id:84905|Hs108|chr20 ( 854) 6007 405.1 2.7e-112
CCDS13227.1 ZNF341 gene_id:84905|Hs108|chr20 ( 847) 5934 400.4 7.1e-111
>>CCDS74719.1 ZNF341 gene_id:84905|Hs108|chr20 (854 aa)
initn: 6007 init1: 6007 opt: 6007 Z-score: 2129.5 bits: 405.1 E(32554): 2.7e-112
Smith-Waterman score: 6007; 100.0% identity (100.0% similar) in 854 aa overlap (1-854:1-854)
10 20 30 40 50 60
pF1KB0 MAQAIFEALEGMDNQTVLAVQSLLDGQGAVPDPTGQSVNAPPAIQPLDDEDVFLCGKCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MAQAIFEALEGMDNQTVLAVQSLLDGQGAVPDPTGQSVNAPPAIQPLDDEDVFLCGKCKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 QFNSLPAFMTHKREQCQGNAPALATVSLATNSIYPPSAAPTAVQQAPTPANRQISTYITV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QFNSLPAFMTHKREQCQGNAPALATVSLATNSIYPPSAAPTAVQQAPTPANRQISTYITV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PPSPLIQTLVQGNILVSDDVLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PPSPLIQTLVQGNILVSDDVLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PPPPPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAAAPLAGSGTVEIQALGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 PPPPPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAAAPLAGSGTVEIQALGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 QPYPPLEVPNQCVEPPVYPTPTVYSPGKQGFKPKGPNPAAPMTSATGGTVATFDSPATLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QPYPPLEVPNQCVEPPVYPTPTVYSPGKQGFKPKGPNPAAPMTSATGGTVATFDSPATLK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 TRRAKGARGLPEAAGKPKAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQCIACGRAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TRRAKGARGLPEAAGKPKAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQCIACGRAFA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 QKSNVKKHMQTHKVWPPGHSGGTVSRNSVTVQVMALNPSRQEDEESTGLGQPLPGAPQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QKSNVKKHMQTHKVWPPGHSGGTVSRNSVTVQVMALNPSRQEDEESTGLGQPLPGAPQPQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 ALSTAGEEEGDKPESKQVVLIDSSYLCQFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 ALSTAGEEEGDKPESKQVVLIDSSYLCQFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 AQTFPKLDTFLEHIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLLPQHSPKKDNAVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AQTFPKLDTFLEHIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLLPQHSPKKDNAVY
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 KCVKCVNKYSTPEALEHHLQTATHNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KCVKCVNKYSTPEALEHHLQTATHNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVCK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 KFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFSTHTGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFSTHTGC
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 SKEFNRPDKLKAHILSHSGMKLHKCALCSKSFSRRAHLAEHQRAHTGNYKFRCAGCAKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SKEFNRPDKLKAHILSHSGMKLHKCALCSKSFSRRAHLAEHQRAHTGNYKFRCAGCAKGF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 SRHKYLKDHRCRLGPQKDKDLQTRRPPQRRAAPRSCGSGGRKVLTPLPDPLGLEELKDTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SRHKYLKDHRCRLGPQKDKDLQTRRPPQRRAAPRSCGSGGRKVLTPLPDPLGLEELKDTG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 AGLVPEAVPGKPPFAEPDAVLSIVVGGAVGAETELVVPGHAEGLGSNLALAELQAGAEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 AGLVPEAVPGKPPFAEPDAVLSIVVGGAVGAETELVVPGHAEGLGSNLALAELQAGAEGP
790 800 810 820 830 840
850
pF1KB0 CAMLAVPVYIQASE
::::::::::::::
CCDS74 CAMLAVPVYIQASE
850
>>CCDS13227.1 ZNF341 gene_id:84905|Hs108|chr20 (847 aa)
initn: 3912 init1: 3912 opt: 5934 Z-score: 2104.0 bits: 400.4 E(32554): 7.1e-111
Smith-Waterman score: 5934; 99.2% identity (99.2% similar) in 854 aa overlap (1-854:1-847)
10 20 30 40 50 60
pF1KB0 MAQAIFEALEGMDNQTVLAVQSLLDGQGAVPDPTGQSVNAPPAIQPLDDEDVFLCGKCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAQAIFEALEGMDNQTVLAVQSLLDGQGAVPDPTGQSVNAPPAIQPLDDEDVFLCGKCKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 QFNSLPAFMTHKREQCQGNAPALATVSLATNSIYPPSAAPTAVQQAPTPANRQISTYITV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QFNSLPAFMTHKREQCQGNAPALATVSLATNSIYPPSAAPTAVQQAPTPANRQISTYITV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 PPSPLIQTLVQGNILVSDDVLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PPSPLIQTLVQGNILVSDDVLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PPPPPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAAAPLAGSGTVEIQALGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PPPPPPPLPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAAAPLAGSGTVEIQALGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 QPYPPLEVPNQCVEPPVYPTPTVYSPGKQGFKPKGPNPAAPMTSATGGTVATFDSPATLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QPYPPLEVPNQCVEPPVYPTPTVYSPGKQGFKPKGPNPAAPMTSATGGTVATFDSPATLK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 TRRAKGARGLPEAAGKPKAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQCIACGRAFA
::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TRRAK-------AAGKPKAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQCIACGRAFA
310 320 330 340 350
370 380 390 400 410 420
pF1KB0 QKSNVKKHMQTHKVWPPGHSGGTVSRNSVTVQVMALNPSRQEDEESTGLGQPLPGAPQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QKSNVKKHMQTHKVWPPGHSGGTVSRNSVTVQVMALNPSRQEDEESTGLGQPLPGAPQPQ
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB0 ALSTAGEEEGDKPESKQVVLIDSSYLCQFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ALSTAGEEEGDKPESKQVVLIDSSYLCQFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSC
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB0 AQTFPKLDTFLEHIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLLPQHSPKKDNAVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AQTFPKLDTFLEHIKSHQEELSYRCHLCGKDFPSLYDLGVHQYSHSLLPQHSPKKDNAVY
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB0 KCVKCVNKYSTPEALEHHLQTATHNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KCVKCVNKYSTPEALEHHLQTATHNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVCK
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB0 KFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFSTHTGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFSTHTGC
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB0 SKEFNRPDKLKAHILSHSGMKLHKCALCSKSFSRRAHLAEHQRAHTGNYKFRCAGCAKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SKEFNRPDKLKAHILSHSGMKLHKCALCSKSFSRRAHLAEHQRAHTGNYKFRCAGCAKGF
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB0 SRHKYLKDHRCRLGPQKDKDLQTRRPPQRRAAPRSCGSGGRKVLTPLPDPLGLEELKDTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SRHKYLKDHRCRLGPQKDKDLQTRRPPQRRAAPRSCGSGGRKVLTPLPDPLGLEELKDTG
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB0 AGLVPEAVPGKPPFAEPDAVLSIVVGGAVGAETELVVPGHAEGLGSNLALAELQAGAEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AGLVPEAVPGKPPFAEPDAVLSIVVGGAVGAETELVVPGHAEGLGSNLALAELQAGAEGP
780 790 800 810 820 830
850
pF1KB0 CAMLAVPVYIQASE
::::::::::::::
CCDS13 CAMLAVPVYIQASE
840
854 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:16:46 2016 done: Sat Nov 5 21:16:46 2016
Total Scan time: 5.370 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]