Result of FASTA (ccds) for
pF1KB0174
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0174, 1358 aa
1>>>pF1KB0174 1358 - 1358 aa - 1358 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2366+/-0.00112; mu= 14.1788+/- 0.067
mean_var=150.2227+/-32.358, 0's: 0 Z-trim(106.4): 83 B-trim: 112 in 1/51
Lambda= 0.104642
statistics sampled from 8899 (8964) to 8899 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.625), E-opt: 0.2 (0.275), width: 16
Scan time: 4.910
The best scores are: opt bits E(32554)
CCDS3067.1 PIK3R4 gene_id:30849|Hs108|chr3 (1358) 9035 1377.5 0
>>CCDS3067.1 PIK3R4 gene_id:30849|Hs108|chr3 (1358 aa)
initn: 9035 init1: 9035 opt: 9035 Z-score: 7377.5 bits: 1377.5 E(32554): 0
Smith-Waterman score: 9035; 100.0% identity (100.0% similar) in 1358 aa overlap (1-1358:1-1358)
10 20 30 40 50 60
pF1KB0 MGNQLAGIAPSQILSVESYFSDIHDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MGNQLAGIAPSQILSVESYFSDIHDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TLPLTSYKQELEELKIRLNSAQNCLPFQKASEKASEKAAMLFRQYVRDNLYDRISTRPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TLPLTSYKQELEELKIRLNSAQNCLPFQKASEKASEKAAMLFRQYVRDNLYDRISTRPFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRTRGELKRAMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 ADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRTRGELKRAMD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 IFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDHSIRELVTQMIHREPDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDHSIRELVTQMIHREPDK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNLCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNLCGH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 DLPEKAEGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 DLPEKAEGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 YLLHFSNDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 YLLHFSNDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 AYAENIALLAETALRFLELVQLKNLNMENDPNNEEIDEVTHPNGNYDTELQALHEMVQQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AYAENIALLAETALRFLELVQLKNLNMENDPNNEEIDEVTHPNGNYDTELQALHEMVQQK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 VVTLLSDPENIVKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGAFFDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VVTLLSDPENIVKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGAFFDS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 IVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYEFASDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYEFASDI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 APFLCHPNLWIRYGAVGFITVVARQISTADVYCKLMPYLDPYITQPIIQIERKLVLLSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 APFLCHPNLWIRYGAVGFITVVARQISTADVYCKLMPYLDPYITQPIIQIERKLVLLSVL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 KEPVSRSIFDYALRSKDITSLFRHLHMRQKKRNGSLPDCPPPEDPAIAQLLKKLLSQGMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 KEPVSRSIFDYALRSKDITSLFRHLHMRQKKRNGSLPDCPPPEDPAIAQLLKKLLSQGMT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 EEEEDKLLALKDFMMKSNKAKANIVDQSHLHDSSQKGVIDLAALGITGRQVDLVKTKQEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EEEEDKLLALKDFMMKSNKAKANIVDQSHLHDSSQKGVIDLAALGITGRQVDLVKTKQEP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 DDKRARKHVKQDSNVNEEWKSMFGSLDPPNMPQALPKGSDQEVIQTGKPPRSESSAGICV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 DDKRARKHVKQDSNVNEEWKSMFGSLDPPNMPQALPKGSDQEVIQTGKPPRSESSAGICV
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 PLSTSSQVPEVTTVQNKKPVIPVLSSTILPSTYQIRITTCKTELQQLIQQKREQCNAERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PLSTSSQVPEVTTVQNKKPVIPVLSSTILPSTYQIRITTCKTELQQLIQQKREQCNAERI
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 AKQMMENAEWESKPPPPGWRPKGLLVAHLHEHKSAVNRIRVSDEHSLFATCSNDGTVKIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AKQMMENAEWESKPPPPGWRPKGLLVAHLHEHKSAVNRIRVSDEHSLFATCSNDGTVKIW
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 NSQKMEGKTTTTRSILTYSRIGGRVKTLTFCQGSHYLAIASDNGAVQLLGIEASKLPKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NSQKMEGKTTTTRSILTYSRIGGRVKTLTFCQGSHYLAIASDNGAVQLLGIEASKLPKSP
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 KIHPLQSRILDQKEDGCVVDMHHFNSGAQSVLAYATVNGSLVGWDLRSSSNAWTLKHDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 KIHPLQSRILDQKEDGCVVDMHHFNSGAQSVLAYATVNGSLVGWDLRSSSNAWTLKHDLK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 SGLITSFAVDIHQCWLCIGTSSGTMACWDMRFQLPISSHCHPSRARIRRLSMHPLYQSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SGLITSFAVDIHQCWLCIGTSSGTMACWDMRFQLPISSHCHPSRARIRRLSMHPLYQSWV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB0 IAAVQGNNEVSMWDMETGDRRFTLWASSAPPLSELQPSPHSVHGIYCSPADGNPILLTAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IAAVQGNNEVSMWDMETGDRRFTLWASSAPPLSELQPSPHSVHGIYCSPADGNPILLTAG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB0 SDMKIRFWDLAYPERSYVVAGSTSSPSVSYYRKIIEGTEVVQEIQNKQKVGPSDDTPRRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SDMKIRFWDLAYPERSYVVAGSTSSPSVSYYRKIIEGTEVVQEIQNKQKVGPSDDTPRRG
1270 1280 1290 1300 1310 1320
1330 1340 1350
pF1KB0 PESLPVGHHDIITDVATFQTTQGFIVTASRDGIVKVWK
::::::::::::::::::::::::::::::::::::::
CCDS30 PESLPVGHHDIITDVATFQTTQGFIVTASRDGIVKVWK
1330 1340 1350
1358 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:41:58 2016 done: Thu Nov 3 11:41:59 2016
Total Scan time: 4.910 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]