Result of FASTA (ccds) for
pF1KA1880
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1880, 612 aa
1>>>pF1KA1880 612 - 612 aa - 612 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1610+/-0.0011; mu= 14.8955+/- 0.066
mean_var=86.5342+/-18.046, 0's: 0 Z-trim(104.5): 129 B-trim: 515 in 1/50
Lambda= 0.137873
statistics sampled from 7796 (7943) to 7796 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.244), width: 16
Scan time: 2.760
The best scores are: opt bits E(32554)
CCDS47418.1 BTBD9 gene_id:114781|Hs108|chr6 ( 612) 4097 825.5 0
CCDS43458.1 BTBD9 gene_id:114781|Hs108|chr6 ( 544) 3641 734.8 7.1e-212
CCDS54998.1 BTBD9 gene_id:114781|Hs108|chr6 ( 582) 2146 437.4 2.5e-122
CCDS12078.1 BTBD2 gene_id:55643|Hs108|chr19 ( 525) 353 80.7 5.2e-15
CCDS32313.1 BTBD1 gene_id:53339|Hs108|chr15 ( 385) 345 79.1 1.2e-14
CCDS10322.1 BTBD1 gene_id:53339|Hs108|chr15 ( 482) 345 79.1 1.5e-14
CCDS10002.2 BTBD6 gene_id:90135|Hs108|chr14 ( 485) 335 77.1 5.8e-14
CCDS13114.1 BTBD3 gene_id:22903|Hs108|chr20 ( 461) 321 74.3 3.8e-13
CCDS13113.1 BTBD3 gene_id:22903|Hs108|chr20 ( 522) 321 74.4 4.3e-13
CCDS1310.1 KLHL20 gene_id:27252|Hs108|chr1 ( 609) 318 73.8 7.3e-13
CCDS58970.1 KLHL3 gene_id:26249|Hs108|chr5 ( 555) 312 72.6 1.6e-12
CCDS4192.1 KLHL3 gene_id:26249|Hs108|chr5 ( 587) 312 72.6 1.6e-12
CCDS10339.1 KLHL25 gene_id:64410|Hs108|chr15 ( 589) 305 71.2 4.3e-12
CCDS3245.2 KLHL6 gene_id:89857|Hs108|chr3 ( 621) 299 70.0 1e-11
CCDS34094.1 KLHL2 gene_id:11275|Hs108|chr4 ( 593) 298 69.8 1.1e-11
CCDS54815.1 KLHL2 gene_id:11275|Hs108|chr4 ( 597) 298 69.8 1.1e-11
CCDS3246.1 KLHL24 gene_id:54800|Hs108|chr3 ( 600) 296 69.4 1.5e-11
CCDS1429.1 KLHL12 gene_id:59349|Hs108|chr1 ( 568) 291 68.4 2.9e-11
CCDS44132.1 IPP gene_id:3652|Hs108|chr1 ( 582) 284 67.0 7.7e-11
CCDS30702.1 IPP gene_id:3652|Hs108|chr1 ( 584) 284 67.0 7.7e-11
CCDS30575.1 KLHL21 gene_id:9903|Hs108|chr1 ( 597) 284 67.0 7.8e-11
>>CCDS47418.1 BTBD9 gene_id:114781|Hs108|chr6 (612 aa)
initn: 4097 init1: 4097 opt: 4097 Z-score: 4406.7 bits: 825.5 E(32554): 0
Smith-Waterman score: 4097; 100.0% identity (100.0% similar) in 612 aa overlap (1-612:1-612)
10 20 30 40 50 60
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEKKRFPAHRVILAARCQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEKKRFPAHRVILAARCQY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 FRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 GFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLSSEGFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLSSEGFLS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENHAEIMQAVRLPLMSLTELLNVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENHAEIMQAVRLPLMSLTELLNVVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 PSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIATMKYGAQVVKGELKSALLDGDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIATMKYGAQVVKGELKSALLDGDT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 QNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRILLWDRDSRSYSYFIEVSMDELDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRILLWDRDSRSYSYFIEVSMDELDW
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 VRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 IVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 IGSIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IGSIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 THNTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 THNTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSP
550 560 570 580 590 600
610
pF1KA1 GSNSRSPNRQHQ
::::::::::::
CCDS47 GSNSRSPNRQHQ
610
>>CCDS43458.1 BTBD9 gene_id:114781|Hs108|chr6 (544 aa)
initn: 3641 init1: 3641 opt: 3641 Z-score: 3917.3 bits: 734.8 E(32554): 7.1e-212
Smith-Waterman score: 3641; 100.0% identity (100.0% similar) in 544 aa overlap (69-612:1-544)
40 50 60 70 80 90
pF1KA1 TFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTG
::::::::::::::::::::::::::::::
CCDS43 MRESQPEAEIPLQDTTAEAFTMLLKYIYTG
10 20 30
100 110 120 130 140 150
pF1KA1 RATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLT
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 CMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENH
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIA
160 170 180 190 200 210
280 290 300 310 320 330
pF1KA1 TMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRIL
220 230 240 250 260 270
340 350 360 370 380 390
pF1KA1 LWDRDSRSYSYFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LWDRDSRSYSYFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNK
280 290 300 310 320 330
400 410 420 430 440 450
pF1KA1 IFHIVAFECMFTNKTFTLEKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IFHIVAFECMFTNKTFTLEKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWD
340 350 360 370 380 390
460 470 480 490 500 510
pF1KA1 SGYTCHQLGSGAIVVQLAQPYMIGSIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SGYTCHQLGSGAIVVQLAQPYMIGSIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKV
400 410 420 430 440 450
520 530 540 550 560 570
pF1KA1 SCKSWQSVTFERQPASFIRIVGTHNTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SCKSWQSVTFERQPASFIRIVGTHNTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSL
460 470 480 490 500 510
580 590 600 610
pF1KA1 AGQQLDSHALRAPSGSSLPSSPGSNSRSPNRQHQ
::::::::::::::::::::::::::::::::::
CCDS43 AGQQLDSHALRAPSGSSLPSSPGSNSRSPNRQHQ
520 530 540
>>CCDS54998.1 BTBD9 gene_id:114781|Hs108|chr6 (582 aa)
initn: 2251 init1: 2146 opt: 2146 Z-score: 2309.8 bits: 437.4 E(32554): 2.5e-122
Smith-Waterman score: 3619; 95.0% identity (95.0% similar) in 580 aa overlap (62-612:3-582)
40 50 60 70 80 90
pF1KA1 GEEYGDVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTML
::::::::::::::::::::::::::::::
CCDS54 MCRALLYGGMRESQPEAEIPLQDTTAEAFTML
10 20 30
100 110 120 130 140 150
pF1KA1 LKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASL
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 YSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCK
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 HNSKENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HNSKENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGML
160 170 180 190 200 210
280 290 300 310 320 330
pF1KA1 IPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSI
220 230 240 250 260 270
340 350 360 370 380
pF1KA1 INHIRILLWDRDSRSYSYFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVC-------
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 INHIRILLWDRDSRSYSYFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVCSGDGVSL
280 290 300 310 320 330
390 400 410 420
pF1KA1 ----------------------RYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIV
::::::::::::::::::::::::::::::::::::::
CCDS54 WCPLWSRTPELKQSSLLGLPKCRYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIV
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA1 PMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIG
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA1 SIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTH
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA1 NTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NTANEVFHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGS
520 530 540 550 560 570
610
pF1KA1 NSRSPNRQHQ
::::::::::
CCDS54 NSRSPNRQHQ
580
>>CCDS12078.1 BTBD2 gene_id:55643|Hs108|chr19 (525 aa)
initn: 209 init1: 96 opt: 353 Z-score: 383.0 bits: 80.7 E(32554): 5.2e-15
Smith-Waterman score: 353; 29.6% identity (60.0% similar) in 240 aa overlap (22-245:103-337)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK----KRF
..:... :. .: :: :.: : .:.
CCDS12 GAERAEEAAGPGAAALQREAAYNWQASKPTVQERFAFLFNNEVLCDVHFLVGKGLSSQRI
80 90 100 110 120 130
50 60 70 80 90 100
pF1KA1 PAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKE
:::: .::. : :.. ::: .. : :.: :. :: :::..:. .. . :
CCDS12 PAHRFVLAVGSAVFDAMFNGGMATTSTEIELP--DVEPAAFLALLKFLYSDEVQIGPE--
140 150 160 170 180
110 120 130 140 150 160
pF1KA1 EVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDR
... : :.::. : :: :.: : .:. : . : :.. :.:. .: .:.
CCDS12 -TVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQLASLCLENIDK
190 200 210 220 230 240
170 180 190 200 210
pF1KA1 NAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKHN----SKENHA
:. .....::: ... .:. .. ::... : .: :.. : :... . ::.
CCDS12 NTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENRR
250 260 270 280 290 300
220 230 240 250 260 270
pF1KA1 EIMQA----VRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEE
... .:.:::.. :. ::.:
CCDS12 KVLGKALGLIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCCL
310 320 330 340 350 360
>>CCDS32313.1 BTBD1 gene_id:53339|Hs108|chr15 (385 aa)
initn: 252 init1: 110 opt: 345 Z-score: 376.4 bits: 79.1 E(32554): 1.2e-14
Smith-Waterman score: 357; 28.5% identity (59.3% similar) in 253 aa overlap (22-252:55-302)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK-------
:.:... :. .: .:: ::. :
CCDS32 PPPPPSPSSLGPLLPLQREPLYNWQATKASLKERFAFLFNSELLSDVRFVLGKGRGAAAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KA1 ---KRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRAT
.:.:::: .::: : :.. ::: .. : :.: :. :: ::...:. ..
CCDS32 GGPQRIPAHRFVLAAGSAVFDAMFNGGMATTSAEIELP--DVEPAAFLALLRFLYSDEVQ
90 100 110 120 130 140
110 120 130 140 150 160
pF1KA1 LTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMC
. :... : :.::. : :: :.: : .:. : . : :.. :.:. .:
CCDS32 IGP---ETVMTTLYTAKKYAVPALEAHCVEFLTKHLRADNAFMLLTQARLFDEPQLASLC
150 160 170 180 190
170 180 190 200 210
pF1KA1 CMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKH-----
.:.......:.::: ... .: .. ::... :. .: :.. : :..
CCDS32 LDTIDKSTMDAISAEGFTDIDIDTLCAVLERDTLSIRESRLFGAVVRWAEAECQRQQLPV
200 210 220 230 240 250
220 230 240 250 260
pF1KA1 ---NSKENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRG
:... .. .. .:.:::.. :. ::.:: ...
CCDS32 TFGNKQKVLGKALSLIRFPLMTIEEFAAGPAQSGILSDREVVNLFLHFTVNPKPRVEYID
260 270 280 290 300 310
270 280 290 300 310 320
pF1KA1 MLIPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQP
CCDS32 RPRCCLRGKECCINRFQQVESRWGYSGTSDRIRSLNMRKSKPWDRMIPALVVMGQLTHSG
320 330 340 350 360 370
>>CCDS10322.1 BTBD1 gene_id:53339|Hs108|chr15 (482 aa)
initn: 252 init1: 110 opt: 345 Z-score: 374.9 bits: 79.1 E(32554): 1.5e-14
Smith-Waterman score: 357; 28.5% identity (59.3% similar) in 253 aa overlap (22-252:55-302)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK-------
:.:... :. .: .:: ::. :
CCDS10 PPPPPSPSSLGPLLPLQREPLYNWQATKASLKERFAFLFNSELLSDVRFVLGKGRGAAAA
30 40 50 60 70 80
50 60 70 80 90 100
pF1KA1 ---KRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRAT
.:.:::: .::: : :.. ::: .. : :.: :. :: ::...:. ..
CCDS10 GGPQRIPAHRFVLAAGSAVFDAMFNGGMATTSAEIELP--DVEPAAFLALLRFLYSDEVQ
90 100 110 120 130 140
110 120 130 140 150 160
pF1KA1 LTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMC
. :... : :.::. : :: :.: : .:. : . : :.. :.:. .:
CCDS10 IGP---ETVMTTLYTAKKYAVPALEAHCVEFLTKHLRADNAFMLLTQARLFDEPQLASLC
150 160 170 180 190
170 180 190 200 210
pF1KA1 CMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKH-----
.:.......:.::: ... .: .. ::... :. .: :.. : :..
CCDS10 LDTIDKSTMDAISAEGFTDIDIDTLCAVLERDTLSIRESRLFGAVVRWAEAECQRQQLPV
200 210 220 230 240 250
220 230 240 250 260
pF1KA1 ---NSKENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRG
:... .. .. .:.:::.. :. ::.:: ...
CCDS10 TFGNKQKVLGKALSLIRFPLMTIEEFAAGPAQSGILSDREVVNLFLHFTVNPKPRVEYID
260 270 280 290 300 310
270 280 290 300 310 320
pF1KA1 MLIPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQP
CCDS10 RPRCCLRGKECCINRFQQVESRWGYSGTSDRIRFTVNRRISIVGFGLYGSIHGPTDYQVN
320 330 340 350 360 370
>>CCDS10002.2 BTBD6 gene_id:90135|Hs108|chr14 (485 aa)
initn: 275 init1: 118 opt: 335 Z-score: 364.2 bits: 77.1 E(32554): 5.8e-14
Smith-Waterman score: 367; 30.4% identity (57.9% similar) in 273 aa overlap (22-274:69-336)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVV----EKKRF
: :. . .. .: ..:: ::: .
CCDS10 APAPPPPAPAPPTLGNNHQESPGWRCCRPTLRERNALMFNNELMADVHFVVGPPGATRTV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KA1 PAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKE
:::. .::. . : :..:: . : . : .:: :. :: .::::.:. . : .
CCDS10 PAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIP--DVEPAAFLILLKYMYSDEI---DLEA
100 110 120 130 140 150
110 120 130 140 150 160
pF1KA1 EVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDR
...: : :.:: : : . ..: : :. .:.:. .. . :. :.:: : .:
CCDS10 DTVLATLYAAKKYIVPALAKACVNFLETSLEAKNACVLLSQSRLFEEPELTQRCWEVIDA
160 170 180 190 200 210
170 180 190 200 210
pF1KA1 NAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKH--------NSK
.:. .: :::: ... .: :: :... . : .: :.::: ::. :..
CCDS10 QAEMALRSEGFCEIDRQTLEIIVTREALNTKEAVVFEAVLNWAEAECKRQGLPITPRNKR
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA1 ENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPD---AILDAIKVRSESR-DMDLNYRGML
. .. . ::.: :.: :. : . : .:. . .:. . .. : :. :. : :
CCDS10 HVLGRALYLVRIPTMTLEEFANGAAQSDILTLEETHSIFLWYTATNKPRLDFPLTKRKGL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA1 IPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSI
:.
CCDS10 APQRCHRFQSSAYRSNQWRYRGRCDSIQFAVDRRVFIAGLGLYGSSSGKAEYSVKIELKR
340 350 360 370 380 390
>>CCDS13114.1 BTBD3 gene_id:22903|Hs108|chr20 (461 aa)
initn: 287 init1: 155 opt: 321 Z-score: 349.4 bits: 74.3 E(32554): 3.8e-13
Smith-Waterman score: 358; 28.9% identity (59.3% similar) in 273 aa overlap (22-274:45-312)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK----KRF
. :. . .. .. ..:: ::: .:.
CCDS13 SSTSVQQYHQQNLSNNNLIPAPNWQGLYPTIRERNAMMFNNDLMADVHFVVGPPGGTQRL
20 30 40 50 60 70
50 60 70 80 90 100
pF1KA1 PAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKE
:.:. .::. . :.:..:: . :.. : .:: :. :: .::::: . :.
CCDS13 PGHKYVLAVGSSVFHAMFYGELAEDKDEIRIP--DVEPAAFLAMLKYIYCDEIDLA---A
80 90 100 110 120
110 120 130 140 150 160
pF1KA1 EVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDR
...: : :.:: :.: . ..: : :. .:.:. .. . :. : :: : .:
CCDS13 DTVLATLYAAKKYIVPHLARACVNFLETSLSAKNACVLLSQSCLFEEPDLTQRCWEVIDA
130 140 150 160 170 180
170 180 190 200 210
pF1KA1 NAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKHN----SKENHA
.:. .:.:::: ... .: .:. :... : : .: : ::: :... : ::.
CCDS13 QAELALKSEGFCDIDFQTLESILRRETLNAKEIVVFEAALNWAEVECQRQDLALSIENKR
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 EIMQA----VRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNY----RGML
... .:.: :.: .. : . ::.:. . : . . .. .:.. : :
CCDS13 KVLGKALYLIRIPTMALDDFANGAAQSGVLTLNETNDIFLWYTAAKKPELQFVSKARKGL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 IPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSI
.:.
CCDS13 VPQRCHRFQSCAYRSNQWRYRGRCDSIQFAVDKRVFIAGFGLYGSSCGSAEYSAKIELKR
310 320 330 340 350 360
>>CCDS13113.1 BTBD3 gene_id:22903|Hs108|chr20 (522 aa)
initn: 287 init1: 155 opt: 321 Z-score: 348.6 bits: 74.4 E(32554): 4.3e-13
Smith-Waterman score: 358; 28.9% identity (59.3% similar) in 273 aa overlap (22-274:106-373)
10 20 30 40
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALLIGEEYGDVTFVVEK----KRF
. :. . .. .. ..:: ::: .:.
CCDS13 SSTSVQQYHQQNLSNNNLIPAPNWQGLYPTIRERNAMMFNNDLMADVHFVVGPPGGTQRL
80 90 100 110 120 130
50 60 70 80 90 100
pF1KA1 PAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKE
:.:. .::. . :.:..:: . :.. : .:: :. :: .::::: . :.
CCDS13 PGHKYVLAVGSSVFHAMFYGELAEDKDEIRIP--DVEPAAFLAMLKYIYCDEIDLA---A
140 150 160 170 180 190
110 120 130 140 150 160
pF1KA1 EVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDR
...: : :.:: :.: . ..: : :. .:.:. .. . :. : :: : .:
CCDS13 DTVLATLYAAKKYIVPHLARACVNFLETSLSAKNACVLLSQSCLFEEPDLTQRCWEVIDA
200 210 220 230 240 250
170 180 190 200 210
pF1KA1 NAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNW----CKHN----SKENHA
.:. .:.:::: ... .: .:. :... : : .: : ::: :... : ::.
CCDS13 QAELALKSEGFCDIDFQTLESILRRETLNAKEIVVFEAALNWAEVECQRQDLALSIENKR
260 270 280 290 300 310
220 230 240 250 260 270
pF1KA1 EIMQA----VRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNY----RGML
... .:.: :.: .. : . ::.:. . : . . .. .:.. : :
CCDS13 KVLGKALYLIRIPTMALDDFANGAAQSGVLTLNETNDIFLWYTAAKKPELQFVSKARKGL
320 330 340 350 360 370
280 290 300 310 320 330
pF1KA1 IPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSI
.:.
CCDS13 VPQRCHRFQSCAYRSNQWRYRGRCDSIQFAVDKRVFIAGFGLYGSSCGSAEYSAKIELKR
380 390 400 410 420 430
>>CCDS1310.1 KLHL20 gene_id:27252|Hs108|chr1 (609 aa)
initn: 203 init1: 113 opt: 318 Z-score: 344.4 bits: 73.8 E(32554): 7.3e-13
Smith-Waterman score: 327; 28.8% identity (59.4% similar) in 281 aa overlap (1-275:46-299)
10 20 30
pF1KA1 MSNSHPLRPFTAVGEIDHVHILSEHIGALL
.:..:: . . :. ...: .:
CCDS13 ETGMDVTSRCTLGDPNKLPEGVPQPARMPYISDKHPRQTL----EV--INLLRKH-----
20 30 40 50 60
40 50 60 70 80 90
pF1KA1 IGEEYGDVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTM
.: ::..:: :.. ::::::.: ::::.. : . ::. ..:. ..: .:. .
CCDS13 --RELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESR-QTEVVIRDIDERAMEL
70 80 90 100 110 120
100 110 120 130 140
pF1KA1 LLKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDV-A
:. . ::.. :. . . ..:: : . . :.... :.: :. .: :. . . :
CCDS13 LIDFAYTSQITVEEGNVQTLLPAACLLQ---LAEIQEACCEFLKRQLDPSN-CLGIRAFA
130 140 150 160 170
150 160 170 180 190 200
pF1KA1 SLYSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAA-PEKDIFLALLN
. .: .: . : ..: :::. :: :. : . :..:. : . . :...: :..
CCDS13 DTHSCRELLRIADKFTQHNFQEVMESEEFMLLPANQLIDIISSDELNVRSEEQVFNAVMA
180 190 200 210 220 230
210 220 230 240 250 260
pF1KA1 WCKHNSKENHAE---IMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDM-D
: :.. .: . . ..: :::::.: :...: . :.. : : ::. :
CCDS13 WVKYSIQERRPQLPQVLQHVRLPLLSPKFLVGTVGSDPLIKSD---------EECRDLVD
240 250 260 270 280
270 280 290 300 310 320
pF1KA1 LNYRGMLIPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEI
.:.:.:
CCDS13 EAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMV
290 300 310 320 330 340
612 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:13:04 2016 done: Wed Nov 2 22:13:04 2016
Total Scan time: 2.760 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]