Result of FASTA (omim) for
pF1KA1763
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1763, 1308 aa
1>>>pF1KA1763 1308 - 1308 aa - 1308 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9862+/-0.000517; mu= 19.2497+/- 0.032
mean_var=112.8011+/-21.094, 0's: 0 Z-trim(110.2): 308 B-trim: 32 in 1/49
Lambda= 0.120758
statistics sampled from 18154 (18502) to 18154 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.56), E-opt: 0.2 (0.217), width: 16
Scan time: 14.230
The best scores are: opt bits E(85289)
NP_207837 (OMIM: 610518) contactin-associated prot (1308) 8864 1557.2 0
NP_001309110 (OMIM: 610518) contactin-associated p (1307) 8844 1553.7 0
XP_011521705 (OMIM: 610518) PREDICTED: contactin-a (1283) 8692 1527.2 0
NP_001309118 (OMIM: 610518) contactin-associated p (1220) 8272 1454.0 0
NP_001309109 (OMIM: 610518) contactin-associated p (1179) 7973 1401.9 0
NP_001309117 (OMIM: 610518) contactin-associated p (1273) 7925 1393.6 0
XP_016879294 (OMIM: 610518) PREDICTED: contactin-a ( 999) 6777 1193.5 0
NP_001309120 (OMIM: 610518) contactin-associated p ( 999) 6777 1193.5 0
NP_620481 (OMIM: 610518) contactin-associated prot (1235) 6446 1135.9 0
NP_001309119 (OMIM: 610518) contactin-associated p (1260) 6446 1135.9 0
NP_001309108 (OMIM: 610518) contactin-associated p (1228) 6300 1110.5 0
NP_387504 (OMIM: 610517) contactin-associated prot (1288) 6269 1105.1 0
NP_001309116 (OMIM: 610518) contactin-associated p ( 836) 5695 1004.9 0
NP_001309107 (OMIM: 610518) contactin-associated p (1258) 5555 980.7 0
XP_006712321 (OMIM: 610519) PREDICTED: contactin-a (1307) 5390 951.9 0
NP_570129 (OMIM: 610519) contactin-associated prot (1306) 5377 949.7 0
NP_054860 (OMIM: 604569,610042,612100) contactin-a (1331) 4251 753.5 2.2e-216
XP_016858805 (OMIM: 610519) PREDICTED: contactin-a (1227) 4102 727.5 1.4e-208
NP_003623 (OMIM: 602346,616286) contactin-associat (1384) 2950 526.9 3.8e-148
XP_016880727 (OMIM: 602346,616286) PREDICTED: cont (1384) 2950 526.9 3.8e-148
XP_005257805 (OMIM: 602346,616286) PREDICTED: cont (1308) 2798 500.4 3.5e-140
XP_016867439 (OMIM: 604569,610042,612100) PREDICTE ( 714) 2343 420.9 1.6e-116
NP_001317025 (OMIM: 600565,614325,614332) neurexin (1437) 563 111.0 6.1e-23
NP_001317016 (OMIM: 600565,614325,614332) neurexin (1440) 563 111.0 6.1e-23
XP_011531485 (OMIM: 600565,614325,614332) PREDICTE (1225) 558 110.1 9.9e-23
NP_001317017 (OMIM: 600565,614325,614332) neurexin (1447) 558 110.2 1.1e-22
NP_001317024 (OMIM: 600565,614325,614332) neurexin (1460) 558 110.2 1.1e-22
XP_011531480 (OMIM: 600565,614325,614332) PREDICTE (1484) 558 110.2 1.1e-22
XP_016860809 (OMIM: 600565,614325,614332) PREDICTE (1495) 532 105.6 2.6e-21
NP_001317014 (OMIM: 600565,614325,614332) neurexin (1498) 532 105.6 2.6e-21
NP_620060 (OMIM: 600566) neurexin-2-beta isoform a (1642) 523 104.1 8.4e-21
XP_016877294 (OMIM: 600567) PREDICTED: neurexin 3 (1464) 519 103.4 1.2e-20
XP_016877292 (OMIM: 600567) PREDICTED: neurexin 3 (1468) 519 103.4 1.2e-20
XP_016877291 (OMIM: 600567) PREDICTED: neurexin 3 (1541) 519 103.4 1.3e-20
NP_001317124 (OMIM: 600567) neurexin 3 isoform 5 [ (1571) 519 103.4 1.3e-20
XP_011535672 (OMIM: 600567) PREDICTED: neurexin 3 (1575) 519 103.4 1.3e-20
XP_016877284 (OMIM: 600567) PREDICTED: neurexin 3 (1675) 519 103.4 1.4e-20
XP_016877283 (OMIM: 600567) PREDICTED: neurexin 3 (1675) 519 103.4 1.4e-20
XP_011535668 (OMIM: 600567) PREDICTED: neurexin 3 (1679) 519 103.4 1.4e-20
XP_016860807 (OMIM: 600565,614325,614332) PREDICTE (1499) 517 103.0 1.6e-20
XP_016877295 (OMIM: 600567) PREDICTED: neurexin 3 (1462) 498 99.7 1.6e-19
XP_016877287 (OMIM: 600567) PREDICTED: neurexin 3 (1666) 498 99.8 1.7e-19
XP_016877285 (OMIM: 600567) PREDICTED: neurexin 3 (1667) 498 99.8 1.7e-19
XP_016860816 (OMIM: 600565,614325,614332) PREDICTE (1466) 497 99.5 1.8e-19
XP_011531477 (OMIM: 600565,614325,614332) PREDICTE (1495) 497 99.5 1.8e-19
NP_001317011 (OMIM: 600565,614325,614332) neurexin (1496) 497 99.5 1.8e-19
NP_001317006 (OMIM: 600565,614325,614332) neurexin (1499) 497 99.5 1.8e-19
XP_005274459 (OMIM: 600566) PREDICTED: neurexin-2- (1503) 495 99.2 2.3e-19
XP_016877293 (OMIM: 600567) PREDICTED: neurexin 3 (1467) 472 95.2 3.6e-18
XP_016877290 (OMIM: 600567) PREDICTED: neurexin 3 (1544) 472 95.2 3.8e-18
>>NP_207837 (OMIM: 610518) contactin-associated protein- (1308 aa)
initn: 8864 init1: 8864 opt: 8864 Z-score: 8349.2 bits: 1557.2 E(85289): 0
Smith-Waterman score: 8864; 99.8% identity (100.0% similar) in 1308 aa overlap (1-1308:1-1308)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_207 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
NP_207 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1270 1280 1290 1300
>>NP_001309110 (OMIM: 610518) contactin-associated prote (1307 aa)
initn: 8436 init1: 8436 opt: 8844 Z-score: 8330.4 bits: 1553.7 E(85289): 0
Smith-Waterman score: 8844; 99.8% identity (99.9% similar) in 1308 aa overlap (1-1308:1-1307)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRRD-AGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
70 80 90 100 110
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
120 130 140 150 160 170
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
780 790 800 810 820 830
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
840 850 860 870 880 890
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
1140 1150 1160 1170 1180 1190
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1200 1210 1220 1230 1240 1250
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1260 1270 1280 1290 1300
>>XP_011521705 (OMIM: 610518) PREDICTED: contactin-assoc (1283 aa)
initn: 8692 init1: 8692 opt: 8692 Z-score: 8187.4 bits: 1527.2 E(85289): 0
Smith-Waterman score: 8692; 99.8% identity (100.0% similar) in 1281 aa overlap (28-1308:3-1283)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
.::::::::::::::::::::::::::::::::
XP_011 MWNYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
580 590 600 610 620 630
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
640 650 660 670 680 690
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
700 710 720 730 740 750
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
760 770 780 790 800 810
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
820 830 840 850 860 870
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
1000 1010 1020 1030 1040 1050
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1060 1070 1080 1090 1100 1110
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
1120 1130 1140 1150 1160 1170
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1180 1190 1200 1210 1220 1230
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1240 1250 1260 1270 1280
>>NP_001309118 (OMIM: 610518) contactin-associated prote (1220 aa)
initn: 8272 init1: 8272 opt: 8272 Z-score: 7792.2 bits: 1454.0 E(85289): 0
Smith-Waterman score: 8272; 99.8% identity (100.0% similar) in 1220 aa overlap (89-1308:1-1220)
60 70 80 90 100 110
pF1KA1 ARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGW
::::::::::::::::::::::::::::::
NP_001 MEVTAVATQGGYGSSNWVTSYLLMFSDSGW
10 20 30
120 130 140 150 160 170
pF1KA1 NWKQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NWKQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KA1 YRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRR
100 110 120 130 140 150
240 250 260 270 280 290
pF1KA1 ARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHAR
160 170 180 190 200 210
300 310 320 330 340 350
pF1KA1 GEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMG
220 230 240 250 260 270
360 370 380 390 400 410
pF1KA1 NVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGG
280 290 300 310 320 330
420 430 440 450 460 470
pF1KA1 ILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAP
340 350 360 370 380 390
480 490 500 510 520 530
pF1KA1 LLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGN
400 410 420 430 440 450
540 550 560 570 580 590
pF1KA1 FSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYK
460 470 480 490 500 510
600 610 620 630 640 650
pF1KA1 HRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFE
520 530 540 550 560 570
660 670 680 690 700 710
pF1KA1 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD
580 590 600 610 620 630
720 730 740 750 760 770
pF1KA1 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY
640 650 660 670 680 690
780 790 800 810 820 830
pF1KA1 KLGPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD
700 710 720 730 740 750
840 850 860 870 880 890
pF1KA1 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK
760 770 780 790 800 810
900 910 920 930 940 950
pF1KA1 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC
820 830 840 850 860 870
960 970 980 990 1000 1010
pF1KA1 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY
880 890 900 910 920 930
1020 1030 1040 1050 1060 1070
pF1KA1 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI
940 950 960 970 980 990
1080 1090 1100 1110 1120 1130
pF1KA1 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV
1000 1010 1020 1030 1040 1050
1140 1150 1160 1170 1180 1190
pF1KA1 KSLVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT
::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 KSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT
1060 1070 1080 1090 1100 1110
1200 1210 1220 1230 1240 1250
pF1KA1 ESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCIT
1120 1130 1140 1150 1160 1170
1260 1270 1280 1290 1300
pF1KA1 AIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1180 1190 1200 1210 1220
>>NP_001309109 (OMIM: 610518) contactin-associated prote (1179 aa)
initn: 7973 init1: 7973 opt: 7973 Z-score: 7510.9 bits: 1401.9 E(85289): 0
Smith-Waterman score: 7973; 99.8% identity (100.0% similar) in 1178 aa overlap (131-1308:2-1179)
110 120 130 140 150 160
pF1KA1 GSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPL
::::::::::::::::::::::::::::::
NP_001 MGFSGNANADSVVYYRLQPSIKARFLRFIPL
10 20 30
170 180 190 200 210 220
pF1KA1 EWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGI
40 50 60 70 80 90
230 240 250 260 270 280
pF1KA1 LLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KA1 GKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNG
160 170 180 190 200 210
350 360 370 380 390 400
pF1KA1 VDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRT
220 230 240 250 260 270
410 420 430 440 450 460
pF1KA1 WNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSA
280 290 300 310 320 330
470 480 490 500 510 520
pF1KA1 KKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLIS
340 350 360 370 380 390
530 540 550 560 570 580
pF1KA1 ISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGY
400 410 420 430 440 450
590 600 610 620 630 640
pF1KA1 RGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSD
460 470 480 490 500 510
650 660 670 680 690 700
pF1KA1 LTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSW
520 530 540 550 560 570
710 720 730 740 750 760
pF1KA1 WVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLP
580 590 600 610 620 630
770 780 790 800 810 820
pF1KA1 VTKIVITDTGRLHSEAAYKLGPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFF
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
NP_001 VTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFF
640 650 660 670 680 690
830 840 850 860 870 880
pF1KA1 FKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVR
700 710 720 730 740 750
890 900 910 920 930 940
pF1KA1 VERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGM
760 770 780 790 800 810
950 960 970 980 990 1000
pF1KA1 TLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEI
820 830 840 850 860 870
1010 1020 1030 1040 1050 1060
pF1KA1 SAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSS
880 890 900 910 920 930
1070 1080 1090 1100 1110 1120
pF1KA1 FYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEID
940 950 960 970 980 990
1130 1140 1150 1160 1170 1180
pF1KA1 DNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLK
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_001 DNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLK
1000 1010 1020 1030 1040 1050
1190 1200 1210 1220 1230 1240
pF1KA1 AALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDS
1060 1070 1080 1090 1100 1110
1250 1260 1270 1280 1290 1300
pF1KA1 AVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVN
1120 1130 1140 1150 1160 1170
pF1KA1 ENQKEYFF
::::::::
NP_001 ENQKEYFF
>>NP_001309117 (OMIM: 610518) contactin-associated prote (1273 aa)
initn: 7916 init1: 7916 opt: 7925 Z-score: 7465.3 bits: 1393.6 E(85289): 0
Smith-Waterman score: 8546; 97.2% identity (97.3% similar) in 1308 aa overlap (1-1308:1-1273)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.::::: :::::
NP_001 LVLGRILEHSDVDQDTALAG-----------------------------------HVTES
1150 1160
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1170 1180 1190 1200 1210 1220
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1230 1240 1250 1260 1270
>>XP_016879294 (OMIM: 610518) PREDICTED: contactin-assoc (999 aa)
initn: 6777 init1: 6777 opt: 6777 Z-score: 6385.7 bits: 1193.5 E(85289): 0
Smith-Waterman score: 6777; 99.7% identity (100.0% similar) in 999 aa overlap (310-1308:1-999)
280 290 300 310 320 330
pF1KA1 LGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYN
.:::::::::::::::::::::::::::::
XP_016 MSFGGIPAPGKSVSFPHRNFHGCLENLYYN
10 20 30
340 350 360 370 380 390
pF1KA1 GVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFR
40 50 60 70 80 90
400 410 420 430 440 450
pF1KA1 TWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS
100 110 120 130 140 150
460 470 480 490 500 510
pF1KA1 AKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLI
160 170 180 190 200 210
520 530 540 550 560 570
pF1KA1 SISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTG
220 230 240 250 260 270
580 590 600 610 620 630
pF1KA1 YRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGS
280 290 300 310 320 330
640 650 660 670 680 690
pF1KA1 DLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLS
340 350 360 370 380 390
700 710 720 730 740 750
pF1KA1 WWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHL
400 410 420 430 440 450
760 770 780 790 800 810
pF1KA1 PVTKIVITDTGRLHSEAAYKLGPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSF
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 PVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSF
460 470 480 490 500 510
820 830 840 850 860 870
pF1KA1 FFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHV
520 530 540 550 560 570
880 890 900 910 920 930
pF1KA1 RVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNG
580 590 600 610 620 630
940 950 960 970 980 990
pF1KA1 MTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNE
640 650 660 670 680 690
1000 1010 1020 1030 1040 1050
pF1KA1 ISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVS
700 710 720 730 740 750
1060 1070 1080 1090 1100 1110
pF1KA1 SFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEI
760 770 780 790 800 810
1120 1130 1140 1150 1160 1170
pF1KA1 DDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPL
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_016 DDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPL
820 830 840 850 860 870
1180 1190 1200 1210 1220 1230
pF1KA1 KAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSD
880 890 900 910 920 930
1240 1250 1260 1270 1280 1290
pF1KA1 SAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAV
940 950 960 970 980 990
1300
pF1KA1 NENQKEYFF
:::::::::
XP_016 NENQKEYFF
>>NP_001309120 (OMIM: 610518) contactin-associated prote (999 aa)
initn: 6777 init1: 6777 opt: 6777 Z-score: 6385.7 bits: 1193.5 E(85289): 0
Smith-Waterman score: 6777; 99.7% identity (100.0% similar) in 999 aa overlap (310-1308:1-999)
280 290 300 310 320 330
pF1KA1 LGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYN
.:::::::::::::::::::::::::::::
NP_001 MSFGGIPAPGKSVSFPHRNFHGCLENLYYN
10 20 30
340 350 360 370 380 390
pF1KA1 GVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFR
40 50 60 70 80 90
400 410 420 430 440 450
pF1KA1 TWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS
100 110 120 130 140 150
460 470 480 490 500 510
pF1KA1 AKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLI
160 170 180 190 200 210
520 530 540 550 560 570
pF1KA1 SISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTG
220 230 240 250 260 270
580 590 600 610 620 630
pF1KA1 YRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGS
280 290 300 310 320 330
640 650 660 670 680 690
pF1KA1 DLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLS
340 350 360 370 380 390
700 710 720 730 740 750
pF1KA1 WWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHL
400 410 420 430 440 450
760 770 780 790 800 810
pF1KA1 PVTKIVITDTGRLHSEAAYKLGPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSF
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 PVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSF
460 470 480 490 500 510
820 830 840 850 860 870
pF1KA1 FFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHV
520 530 540 550 560 570
880 890 900 910 920 930
pF1KA1 RVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNG
580 590 600 610 620 630
940 950 960 970 980 990
pF1KA1 MTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNE
640 650 660 670 680 690
1000 1010 1020 1030 1040 1050
pF1KA1 ISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVS
700 710 720 730 740 750
1060 1070 1080 1090 1100 1110
pF1KA1 SFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEI
760 770 780 790 800 810
1120 1130 1140 1150 1160 1170
pF1KA1 DDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPL
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_001 DDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPL
820 830 840 850 860 870
1180 1190 1200 1210 1220 1230
pF1KA1 KAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSD
880 890 900 910 920 930
1240 1250 1260 1270 1280 1290
pF1KA1 SAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAV
940 950 960 970 980 990
1300
pF1KA1 NENQKEYFF
:::::::::
NP_001 NENQKEYFF
>>NP_620481 (OMIM: 610518) contactin-associated protein- (1235 aa)
initn: 8344 init1: 6446 opt: 6446 Z-score: 6072.9 bits: 1135.9 E(85289): 0
Smith-Waterman score: 8252; 96.0% identity (96.3% similar) in 1281 aa overlap (28-1308:3-1235)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
.::::::::::::::::::::::::::::::::
NP_620 MWNYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::: :::
NP_620 FNLMNLDYE------------------------------------------------GNV
280
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
290 300 310 320 330 340
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
350 360 370 380 390 400
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
410 420 430 440 450 460
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
470 480 490 500 510 520
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
530 540 550 560 570 580
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
590 600 610 620 630 640
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
650 660 670 680 690 700
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
710 720 730 740 750 760
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
770 780 790 800 810 820
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
830 840 850 860 870 880
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
890 900 910 920 930 940
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
950 960 970 980 990 1000
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1010 1020 1030 1040 1050 1060
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_620 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
1070 1080 1090 1100 1110 1120
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1130 1140 1150 1160 1170 1180
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1190 1200 1210 1220 1230
>>NP_001309119 (OMIM: 610518) contactin-associated prote (1260 aa)
initn: 8516 init1: 6446 opt: 6446 Z-score: 6072.8 bits: 1135.9 E(85289): 0
Smith-Waterman score: 8424; 96.2% identity (96.3% similar) in 1308 aa overlap (1-1308:1-1260)
10 20 30 40 50 60
pF1KA1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
::::::::: :::
NP_001 FNLMNLDYE------------------------------------------------GNV
310
370 380 390 400 410 420
pF1KA1 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
320 330 340 350 360 370
430 440 450 460 470 480
pF1KA1 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
380 390 400 410 420 430
490 500 510 520 530 540
pF1KA1 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
440 450 460 470 480 490
550 560 570 580 590 600
pF1KA1 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
500 510 520 530 540 550
610 620 630 640 650 660
pF1KA1 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
560 570 580 590 600 610
670 680 690 700 710 720
pF1KA1 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
620 630 640 650 660 670
730 740 750 760 770 780
pF1KA1 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
680 690 700 710 720 730
790 800 810 820 830 840
pF1KA1 GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
740 750 760 770 780 790
850 860 870 880 890 900
pF1KA1 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
800 810 820 830 840 850
910 920 930 940 950 960
pF1KA1 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
860 870 880 890 900 910
970 980 990 1000 1010 1020
pF1KA1 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
920 930 940 950 960 970
1030 1040 1050 1060 1070 1080
pF1KA1 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
980 990 1000 1010 1020 1030
1090 1100 1110 1120 1130 1140
pF1KA1 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
1040 1050 1060 1070 1080 1090
1150 1160 1170 1180 1190 1200
pF1KA1 LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
1100 1110 1120 1130 1140 1150
1210 1220 1230 1240 1250 1260
pF1KA1 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
1160 1170 1180 1190 1200 1210
1270 1280 1290 1300
pF1KA1 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
1220 1230 1240 1250 1260
1308 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:09:44 2016 done: Thu Nov 3 20:09:46 2016
Total Scan time: 14.230 Total Display time: 0.670
Function used was FASTA [36.3.4 Apr, 2011]