Result of FASTA (ccds) for
pF1KA1732
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1732, 2642 aa
1>>>pF1KA1732 2642 - 2642 aa - 2642 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.2869+/-0.00126; mu= -9.9795+/- 0.076
mean_var=428.1346+/-88.994, 0's: 0 Z-trim(113.0): 48 B-trim: 109 in 1/52
Lambda= 0.061985
statistics sampled from 13661 (13694) to 13661 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.421), width: 16
Scan time: 8.350
The best scores are: opt bits E(32554)
CCDS2749.2 SETD2 gene_id:29072|Hs108|chr3 (2564) 10784 980.7 0
>>CCDS2749.2 SETD2 gene_id:29072|Hs108|chr3 (2564 aa)
initn: 10784 init1: 10784 opt: 10784 Z-score: 5223.0 bits: 980.7 E(32554): 0
Smith-Waterman score: 17020; 97.0% identity (97.0% similar) in 2642 aa overlap (1-2642:1-2564)
10 20 30 40 50 60
pF1KA1 MKQLQPQPPPKMGDFYDPEHPTPEEEENEAKIENVQKTGFIKGPMFKGVASSRFLPKGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MKQLQPQPPPKMGDFYDPEHPTPEEEENEAKIENVQKTGFIKGPMFKGVASSRFLPKGTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 TKVNLEEQGRQKVSFSFSLTKKTLQNRFLTALGNEKQSDTPNPPAVPLQVDSTPKMKMEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TKVNLEEQGRQKVSFSFSLTKKTLQNRFLTALGNEKQSDTPNPPAVPLQVDSTPKMKMEI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 GDTLSTAEESSPPKSRVELGKIHFKKHLLHVTSRPLLATTTAVASPPTHAAPLPAVIAES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 GDTLSTAEESSPPKSRVELGKIHFKKHLLHVTSRPLLATTTAVASPPTHAAPLPAVIAES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 TTVDSPPSSPPPPPPPAQATTLSSPAPVTEPVALPHTPITVLMAAPVPLPVDVAVRSLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TTVDSPPSSPPPPPPPAQATTLSSPAPVTEPVALPHTPITVLMAAPVPLPVDVAVRSLKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 PPIIIVPESLEADTKQDTISNSLEEHVTQILNEQADISSKKEDSHIGKDEEIPDSSKISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PPIIIVPESLEADTKQDTISNSLEEHVTQILNEQADISSKKEDSHIGKDEEIPDSSKISL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SCKKTGSKKKSSQSEGIFLGSESDEDSVRTSSSQRSHDLKFSASIEKERDFKKSSAPLKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 SCKKTGSKKKSSQSEGIFLGSESDEDSVRTSSSQRSHDLKFSASIEKERDFKKSSAPLKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 EDLGKPSRSKTDRDDKYFSYSKLERDTRYVSSRCRSERERRRSRSHSRSERGSRTNLSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 EDLGKPSRSKTDRDDKYFSYSKLERDTRYVSSRCRSERERRRSRSHSRSERGSRTNLSYS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 RSERSHYYDSDRRYHRSSPYRERTRYSRPYTDNRARESSDSEEEYKKTYSRRTSSHSSSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RSERSHYYDSDRRYHRSSPYRERTRYSRPYTDNRARESSDSEEEYKKTYSRRTSSHSSSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 RDLRTSSYSKSDRDCKTETSYLEMERRGKYSSKLERESKRTSENEAIKRCCSPPNELGFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RDLRTSSYSKSDRDCKTETSYLEMERRGKYSSKLERESKRTSENEAIKRCCSPPNELGFR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 RGSSYSKHDSSASRYKSTLSKPIPKSDKFKNSFCCTELNEEIKQSHSFSLQTPCSKGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RGSSYSKHDSSASRYKSTLSKPIPKSDKFKNSFCCTELNEEIKQSHSFSLQTPCSKGSEL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 RMINKNPEREKAGSPAPSNRLNDSPTLKKLDELPIFKSEFITHDSHDSIKELDSLSKVKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RMINKNPEREKAGSPAPSNRLNDSPTLKKLDELPIFKSEFITHDSHDSIKELDSLSKVKN
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 DQLRSFCPIELNINGSPGAESDLATFCTSKTDAVLMTSDDSVTGSELSPLVKACMLSSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 DQLRSFCPIELNINGSPGAESDLATFCTSKTDAVLMTSDDSVTGSELSPLVKACMLSSNG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 FQNISRCKEKDLDDTCMLHKKSESPFRETEPLVSPHQDKLMSMPVMTVDYSKTVVKEPVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 FQNISRCKEKDLDDTCMLHKKSESPFRETEPLVSPHQDKLMSMPVMTVDYSKTVVKEPVD
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 TRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMKISSNSFMNVHLESKPVICDSRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMKISSNSFMNVHLESKPVICDSRN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 LTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGIASSLQSLPPGIKVDSLTLLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 LTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGIASSLQSLPPGIKVDSLTLLKC
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 GENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGSDLPDSGKGFASRENRRNNGLSGKCLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 GENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGSDLPDSGKGFASRENRRNNGLSGKCLQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 EAQEEGNSILPERRGRPEISLDERGEGGHVHTSDDSEVVFSSCDLNLTMEDSDGVTYALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 EAQEEGNSILPERRGRPEISLDERGEGGHVHTSDDSEVVFSSCDLNLTMEDSDGVTYALK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 CDSSGHAPEIVSTVHEDYSGSSESSNDESDSEDTDSDDSSIPRNRLQSVVVVPKNSTLPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 CDSSGHAPEIVSTVHEDYSGSSESSNDESDSEDTDSDDSSIPRNRLQSVVVVPKNSTLPM
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 EETSPCSSRSSQSYRHYSDHWEDERLESRRHLYEEKFESIASKACPQTDKFFLHKGTEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 EETSPCSSRSSQSYRHYSDHWEDERLESRRHLYEEKFESIASKACPQTDKFFLHKGTEKN
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 PEISFTQSSRKQIDNRLPELSHPQSDGVDSTSHTDVKSDPLGHPNSEETVKAKIPSRQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PEISFTQSSRKQIDNRLPELSHPQSDGVDSTSHTDVKSDPLGHPNSEETVKAKIPSRQQE
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 ELPIYSSDFEDVPNKSWQQTTFQNRPDSRLGKTELSFSSSCEIPHVDGLHSSEELRNLGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 ELPIYSSDFEDVPNKSWQQTTFQNRPDSRLGKTELSFSSSCEIPHVDGLHSSEELRNLGW
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 DFSQEKPSTTYQQPDSSYGACGGHKYQQNAEQYGGTRDYWQGNGYWDPRSGRPPGTGVVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 DFSQEKPSTTYQQPDSSYGACGGHKYQQNAEQYGGTRDYWQGNGYWDPRSGRPPGTGVVY
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 DRTQGQVPDSLTDDREEEENWDQQDGSHFSDQSDKFLLSLQKDKGSVQAPEISSNSIKDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 DRTQGQVPDSLTDDREEEENWDQQDGSHFSDQSDKFLLSLQKDKGSVQAPEISSNSIKDT
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 LAVNEKKDFSKNLEKNDIKDRGPLKKRRQEIESDSESDGELQDRKKVRVEVEQGETSVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 LAVNEKKDFSKNLEKNDIKDRGPLKKRRQEIESDSESDGELQDRKKVRVEVEQGETSVPP
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 GSALVGPSCVMDDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 GSALVGPSCVMDDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCE
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 CTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 CTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKK
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 GWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDETESRSIA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 GWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDE-------
1570 1580 1590 1600 1610
1630 1640 1650 1660 1670 1680
pF1KA1 QAGVQWQDLGSLQPLPPGFKRFSCLSFLSSWDYRRPPPRLANFCIFSRDGVSPRWPGWSR
CCDS27 ------------------------------------------------------------
1690 1700 1710 1720 1730 1740
pF1KA1 SPDLTKALRLQIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSEL
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 -----------IIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSEL
1620 1630 1640 1650 1660
1750 1760 1770 1780 1790 1800
pF1KA1 TFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKERSRKKDSVDGELEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKERSRKKDSVDGELEAL
1670 1680 1690 1700 1710 1720
1810 1820 1830 1840 1850 1860
pF1KA1 MENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLELIQNTHSQSCLKSFLERHGLSLLWIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLELIQNTHSQSCLKSFLERHGLSLLWIW
1730 1740 1750 1760 1770 1780
1870 1880 1890 1900 1910 1920
pF1KA1 MAELGDGRESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPIIQRWSQTKTAVPPLSEGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MAELGDGRESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPIIQRWSQTKTAVPPLSEGDG
1790 1800 1810 1820 1830 1840
1930 1940 1950 1960 1970 1980
pF1KA1 YSSENTSRAHTPLNTPDPSTKLSTEADTDTPKKLMFRRLKIISENSMDSAISDATSELEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 YSSENTSRAHTPLNTPDPSTKLSTEADTDTPKKLMFRRLKIISENSMDSAISDATSELEG
1850 1860 1870 1880 1890 1900
1990 2000 2010 2020 2030 2040
pF1KA1 KDGKEDLDQLENVPVEEEEELQSQQLLPQQLPECKVDSETNIEASKLPTSEPEADAEIEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 KDGKEDLDQLENVPVEEEEELQSQQLLPQQLPECKVDSETNIEASKLPTSEPEADAEIEP
1910 1920 1930 1940 1950 1960
2050 2060 2070 2080 2090 2100
pF1KA1 KESNGTKLEEPINEETPSQDEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 KESNGTKLEEPINEETPSQDEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEV
1970 1980 1990 2000 2010 2020
2110 2120 2130 2140 2150 2160
pF1KA1 YRIPKKSQTEKENTTTERGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 YRIPKKSQTEKENTTTERGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLS
2030 2040 2050 2060 2070 2080
2170 2180 2190 2200 2210 2220
pF1KA1 PPSSAYERGTKRPDDRYDTPTSKKKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PPSSAYERGTKRPDDRYDTPTSKKKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQ
2090 2100 2110 2120 2130 2140
2230 2240 2250 2260 2270 2280
pF1KA1 NLGMTSPLPYDSLGYNAPHHPFAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPVCSPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 NLGMTSPLPYDSLGYNAPHHPFAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPVCSPAP
2150 2160 2170 2180 2190 2200
2290 2300 2310 2320 2330 2340
pF1KA1 YDHAQPLVGHSTEPLSAPPPVPVVPHVAAPVEVSSSQYVAQSDGVVHQDSSVAVLPVPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 YDHAQPLVGHSTEPLSAPPPVPVVPHVAAPVEVSSSQYVAQSDGVVHQDSSVAVLPVPAP
2210 2220 2230 2240 2250 2260
2350 2360 2370 2380 2390 2400
pF1KA1 GPVQGQNYSVWDSNQQSVSVQQQYSPAQSQATIYYQGQTCPTVYGVTSPYSQTTPPIVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 GPVQGQNYSVWDSNQQSVSVQQQYSPAQSQATIYYQGQTCPTVYGVTSPYSQTTPPIVQS
2270 2280 2290 2300 2310 2320
2410 2420 2430 2440 2450 2460
pF1KA1 YAQPSLQYIQGQQIFTAHPQGVVVQPAAAVTTIVAPGQPQPLQPSEMVVTNNLLDLPPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 YAQPSLQYIQGQQIFTAHPQGVVVQPAAAVTTIVAPGQPQPLQPSEMVVTNNLLDLPPPS
2330 2340 2350 2360 2370 2380
2470 2480 2490 2500 2510 2520
pF1KA1 PPKPKTIVLPPNWKTARDPEGKIYYYHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PPKPKTIVLPPNWKTARDPEGKIYYYHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTP
2390 2400 2410 2420 2430 2440
2530 2540 2550 2560 2570 2580
pF1KA1 TYDENPMKASKKPKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 TYDENPMKASKKPKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTT
2450 2460 2470 2480 2490 2500
2590 2600 2610 2620 2630 2640
pF1KA1 EDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYKPKEDTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 EDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYKPKEDTE
2510 2520 2530 2540 2550 2560
pF1KA1 LE
::
CCDS27 LE
2642 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:55:45 2016 done: Wed Nov 2 21:55:47 2016
Total Scan time: 8.350 Total Display time: 0.330
Function used was FASTA [36.3.4 Apr, 2011]