FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1717, 366 aa
  1>>>pF1KA1717 366 - 366 aa - 366 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6202+/-0.000837; mu= 14.2059+/- 0.050
 mean_var=63.6236+/-12.518, 0's: 0 Z-trim(106.5): 38  B-trim: 3 in 1/50
 Lambda= 0.160792
 statistics sampled from 9006 (9039) to 9006 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.278), width:  16
 Scan time:  1.990

The best scores are:                                      opt bits E(32554)
CCDS3748.1 SETD7 gene_id:80854|Hs108|chr4          ( 366) 2516 592.4 2.1e-169
CCDS77961.1 SETD7 gene_id:80854|Hs108|chr4         ( 362) 2102 496.3 1.7e-140
CCDS82956.1 SETD7 gene_id:80854|Hs108|chr4         ( 135)  881 213.0 1.3e-55


>>CCDS3748.1 SETD7 gene_id:80854|Hs108|chr4               (366 aa)
 initn: 2516 init1: 2516 opt: 2516  Z-score: 3154.9  bits: 592.4 E(32554): 2.1e-169
Smith-Waterman score: 2516; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KA1 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 IYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 IYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 HFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 HFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 PNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQVELKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 PNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQVELKAF
              310       320       330       340       350       360

             
pF1KA1 QATQQK
       ::::::
CCDS37 QATQQK
             

>>CCDS77961.1 SETD7 gene_id:80854|Hs108|chr4              (362 aa)
 initn: 2182 init1: 2098 opt: 2102  Z-score: 2635.9  bits: 496.3 E(32554): 1.7e-140
Smith-Waterman score: 2102; 96.3% identity (97.8% similar) in 321 aa overlap (1-321:1-319)

               10        20        30        40        50        60
pF1KA1 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 IYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 IYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 HFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 HFELMPGNSVYHFDKSTSSCISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 VMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 PNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWYQVELKAF
       ::::::.  . ..:   : :.                                       
CCDS77 PNCIYDIGQKNHLGT--CKRSRFGAPLPKIPHLDQAPWVEHRKAGIPLYSAAQGLMLIMM
              310         320       330       340       350        

>>CCDS82956.1 SETD7 gene_id:80854|Hs108|chr4              (135 aa)
 initn: 881 init1: 881 opt: 881  Z-score: 1112.1  bits: 213.0 E(32554): 1.3e-55
Smith-Waterman score: 881; 100.0% identity (100.0% similar) in 124 aa overlap (1-124:1-124)

               10        20        30        40        50        60
pF1KA1 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MDSDDEMVEEAVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 IYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEMIEGKLATLMSTEEGRP
       ::::                                                        
CCDS82 IYYPVSRVTVHSAGK                                             
              130                                                  




366 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 21:54:11 2016 done: Wed Nov  2 21:54:12 2016
 Total Scan time:  1.990 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]