Result of FASTA (ccds) for
pF1KA1689
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1689, 2624 aa
1>>>pF1KA1689 2624 - 2624 aa - 2624 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2268+/-0.00136; mu= 9.1937+/- 0.082
mean_var=200.5491+/-39.376, 0's: 0 Z-trim(106.3): 59 B-trim: 2 in 1/52
Lambda= 0.090566
statistics sampled from 8860 (8900) to 8860 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.583), E-opt: 0.2 (0.273), width: 16
Scan time: 7.950
The best scores are: opt bits E(32554)
CCDS43328.1 BDP1 gene_id:55814|Hs108|chr5 (2624) 16826 2213.2 0
>>CCDS43328.1 BDP1 gene_id:55814|Hs108|chr5 (2624 aa)
initn: 16826 init1: 16826 opt: 16826 Z-score: 11883.8 bits: 2213.2 E(32554): 0
Smith-Waterman score: 16826; 99.8% identity (100.0% similar) in 2624 aa overlap (1-2624:1-2624)
10 20 30 40 50 60
pF1KA1 MFRRARLSVKPNVRPGVGARGSTASNPQRGRESPRPPEPATDSASKPAEPTDVPTVDFGG
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
CCDS43 MFRRARLSVKPNVRPGVGARGSTASNPQRGRESPRPPDPATDSASKPAEPTDVPTVDFGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AEPQEKAPRSSTEKTGGDNDVEESSRSSSTVSQRRKRISSTSSLVKSSVSVPSESHPLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AEPQEKAPRSSTEKTGGDNDVEESSRSSSTVSQRRKRISSTSSLVKSSVSVPSESHPLST
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 INQEAPQPTATSTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAINESQRPPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 INQEAPQPTATSTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAINESQRPPD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RSKMTMRDFIYYLPDNNPMTSSLEQEKKTEKPSTPVQTREQEGKSTPNAEDNEMEEETDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RSKMTMRDFIYYLPDNNPMTSSLEQEKKTEKPSTPVQTREQEGKSTPNAEDNEMEEETDD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 GPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 KPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PFDFDFFAHLLQKVLAEEEKRKQKSVKNHSLKEKKSTKPRKNVKVKKVACEGVNNDPDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PFDFDFFAHLLQKVLAEEEKRKQKSVKNHSLKEKKSTKPRKNVKVKKVACEGVNNDPDES
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 MSSRISDTERSQKDAQTVEEESLTLSREDAEQVALEVDLNQKKRRRKKQDGANELGVNNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSSRISDTERSQKDAQTVEEESLTLSREDAEQVALEVDLNQKKRRRKKQDGANELGVNNL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 LENATVQAGPSKGEKHKNKCQAIRPELKEGECSKEQMLSCTQNIDGIVGFASTEKVEKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LENATVQAGPSKGEKHKNKCQAIRPELKEGECSKEQMLSCTQNIDGIVGFASTEKVEKRT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 DPILSLSNQQDATSVATESSESSTSDLPSFEVGIRALCEVNNAEGSCIEERNVDLKNNSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DPILSLSNQQDATSVATESSESSTSDLPSFEVGIRALCEVNNAEGSCIEERNVDLKNNSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 EIDQTENVKPMLRGRFQRPKPNLSRAGKKSVLSQGKTESESKNSHSKTSVEKNHVEKDKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EIDQTENVKPMLRGRFQRPKPNLSRAGKKSVLSQGKTESESKNSHSKTSVEKNHVEKDKM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 NTLDILRMETTERENPEAETVSVLGEKNCLQEGSQLKALRPVQVRGRLQKPKPNAGKAAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NTLDILRMETTERENPEAETVSVLGEKNCLQEGSQLKALRPVQVRGRLQKPKPNAGKAAE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 RKEILISQEEIGANVEKNENESCADRDTPQHMEDQSCKDFEEEDVILQPEKNDSFQNVQP
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS43 RKEILISQEEIGANVEKNENESCADRDTPQHMEDQSRKDFEEEDVILQPEKNDSFQNVQP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 DEPKVLNECLSVQENNKANKLNQVPILRTRFQKPKPNIGRGTGRREISSKEEVLEKILVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DEPKVLNECLSVQENNKANKLNQVPILRTRFQKPKPNIGRGTGRREISSKEEVLEKILVS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 GEMAAALRETVRLDTSPKEMVPAEINTKEMQSDLKETGRRAISPREKILDVIDDTIEMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GEMAAALRETVRLDTSPKEMVPAEINTKEMQSDLKETGRRAISPREKILDVIDDTIEMET
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 GLKAMGREICLREKTPEVIDATEEIDKDLEEAGRREISPQKNGPEEVKPLGEVETDLKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GLKAMGREICLREKTPEVIDATEEIDKDLEEAGRREISPQKNGPEEVKPLGEVETDLKAT
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 GNESSPREKTPEVTDATEEIDKNLEETGRRKISPRENGPEEVKPVDEMETDLNATGRESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GNESSPREKTPEVTDATEEIDKNLEETGRRKISPRENGPEEVKPVDEMETDLNATGRESS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 PREKTPEVIDATEEIDLEETEREVSPQENGLEEVKPLGEMETDLKATGRDSFPRGKTPEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PREKTPEVIDATEEIDLEETEREVSPQENGLEEVKPLGEMETDLKATGRDSFPRGKTPEV
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 IDAIEEIEIDLEETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IDAIEEIEIDLEETEREISPQENGLEEVKPLGEMQTDLKATGREISPREKTPEVIDATEE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 IDKDLEETGRREISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IDKDLEETGRREISPEENGPEEVKPVDEMETDLKTTGREGSSREKTREVIDAAEVIETDL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 EETEREISPQENGPEEVKPVGKMETDLKEIREEISQREKVLAEISAIREKEIDLKETGKR
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS43 EETEREISPQENGPEEVKPVGKMETDLKEIREEISQREKVLAEFSAIREKEIDLKETGKR
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 DIPMMEKVSGKMAVVEEMEADLKETGKENFRERGSEEICVTEEKVAELKQTGKTDISPRE
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DIPIMEKVSGKMAVVEEMEADLKETGKENFRERGSEEICVTEEKVAELKQTGKTDISPRE
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 NELEETSTSRQTDTHLMQSGSNDFSAMPSLDIQNISSEVLSMMHTPVEEKRNSEKEVSSH
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
CCDS43 NELEETSTSRQTDTHLMQSGSNDFSAVPSLDIQNISSEVLSMMHTPVEEKRNSEKEVSSH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 FSHFKISSQTHESDKTEVQGIQSPDVPEQFSDINLSKSLPQEQKPLEIKPAPFVRSRFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FSHFKISSQTHESDKTEVQGIQSPDVPEQFSDINLSKSLPQEQKPLEIKPAPFVRSRFKR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 PKPNLARAALKRETTESEKYIYEKKSETEKMETIVMQENNEQTDTLPSQHDEASLMISRE
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS43 PKPNLARAALKRETTESEKYIYEKKSETKKMETIVMQENNEQTDTLPSQHDEASLMISRE
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 KDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEESQSAPVQKNDSVVSVGTNNVNTFQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KDTLGHRNEEAVILPCTQTERNLSPSNSCEPKEESQSAPVQKNDSVVSVGTNNVNTFQQE
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 MKESVIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAKGIIKEGRTILPKDETEKKVLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKESVIQTARQVRGRLQRPRPNIRKTGQRQIVDKGEAKGIIKEGRTILPKDETEKKVLTV
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA1 SNSQIETEIEVPSSAVPEHRMYENQSQVVLVENLHVNKTNETIRHENKPYVPSSAQMTRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SNSQIETEIEVPSSAVPEHRMYENQSQVVLVENLHVNKTNETIRHENKPYVPSSAQMTRR
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA1 KFQKAKPNLGRAHSKKEEPVLEKVTTDQSKEGKPEDHLLQKGASNTQLLLKEKAELLTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KFQKAKPNLGRAHSKKEEPVLEKVTTDQSKEGKPEDHLLQKGASNTQLLLKEKAELLTSL
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA1 EVSARKDCVGSKESALAKIDAELEEVGPSRRVGEETVGDNSPSSVVEEQYLNKLTSCPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EVSARKDCVGSKESALAKIDAELEEVGPSRRVGEETVGDNSPSSVVEEQYLNKLTSCPQP
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA1 LNETSYSKIALDGKTTISSTSEYERNRGERRSHKKFKPNVTRGRGSKRVRGKTSKKEPRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LNETSYSKIALDGKTTISSTSEYERNRGERRSHKKFKPNVTRGRGSKRVRGKTSKKEPRA
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA1 SKAMLVTLRASQEEDDDADDFESDYEEESYHLAPEEVNKAPVFVPVGLRSPEPVSAQIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SKAMLVTLRASQEEDDDADDFESDYEEESYHLAPEEVNKAPVFVPVGLRSPEPVSAQIEE
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA1 TMEELEITVNVPDVGCIAVVEHELPNTDVTTEEMKQEENLSVPFEMTTSEHIQDEPGTND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TMEELEITVNVPDVGCIAVVEHELPNTDVTTEEMKQEENLSVPFEMTTSEHIQDEPGTND
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KA1 GSTEAAITLLTMGDLVLQSEISSEQGDVGVCIIPHVHSKDKSHIPSSLDNVNHKIVHECQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GSTEAAITLLTMGDLVLQSEISSEQGDVGVCIIPHVHSKDKSHIPSSLDNVNHKIVHECQ
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KA1 ELSSPVITTSPASFEENKIVLEEQSSREEISLMEKVKENATPTRNTISKVTSNLRIRSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ELSSPVITTSPASFEENKIVLEEQSSREEISLMEKVKENATPTRNTISKVTSNLRIRSRL
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KA1 AKPKPNLEKTLGTNRLDDYQEVSSLCVTKGAEMETQRETEKNASKATELENKNLGPVTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AKPKPNLEKTLGTNRLDDYQEVSSLCVTKGAEMETQRETEKNASKATELENKNLGPVTTA
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KA1 ENKDQSKLACVHGIKGTSISSEVNLTERNENQEESSQEVHMLSVAPVASSETGPCTLGLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ENKDQSKLACVHGIKGTSISSEVNLTERNENQEESSQEVHMLSVAPVASSETGPCTLGLD
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KA1 RGLGENSVEEPQIKDSKGDSVLTLPVPEYTPTSIPEVQQENIINPQDLTVNLVANVPQDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RGLGENSVEEPQIKDSKGDSVLTLPVPEYTPTSIPEVQQENIINPQDLTVNLVANVPQDG
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KA1 EDEQAFILTLVEIPANAVEEFTDATAQFMPNPLLPAPILVKSVNTEERGDMSICLPATSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EDEQAFILTLVEIPANAVEEFTDATAQFMPNPLLPAPILVKSVNTEERGDMSICLPATSV
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KA1 GQDAMGLSISGRDNSKKPPDNLDLVSRKRFQCRLDKNDHIPPAKKRSLTLRDDCQEYTTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GQDAMGLSISGRDNSKKPPDNLDLVSRKRFQCRLDKNDHIPPAKKRSLTLRDDCQEYTTE
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KA1 VHSKELTNVFEETGESHKGQDIFLTSGSTLTTPEPQRQQVEAAFQSRGSRSPDACMDKNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VHSKELTNVFEETGESHKGQDIFLTSGSTLTTPEPQRQQVEAAFQSRGSRSPDACMDKNV
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KA1 PQLPQDEMIVSDKEERTDAAPKSQQMDSRTSSSKASLSRPGRRPLGFLSLICSKNSLESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PQLPQDEMIVSDKEERTDAAPKSQQMDSRTSSSKASLSRPGRRPLGFLSLICSKNSLESD
2470 2480 2490 2500 2510 2520
2530 2540 2550 2560 2570 2580
pF1KA1 EPMQVHSKKRLKPLIPGLRKKLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSSAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EPMQVHSKKRLKPLIPGLRKKLKRSNPFNESQEKNRESSDLLPSPSVITTQSENISSSAT
2530 2540 2550 2560 2570 2580
2590 2600 2610 2620
pF1KA1 QVSCDQPLLKEGYKSAQKRAPQGEATTVSEYFFNDIFIEVDETE
::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QVSCDQPLLKEGYKSAQKRAPQGEATTVSEYFFNDIFIEVDETE
2590 2600 2610 2620
2624 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 20:08:50 2016 done: Thu Nov 3 20:08:52 2016
Total Scan time: 7.950 Total Display time: 0.350
Function used was FASTA [36.3.4 Apr, 2011]