Result of FASTA (omim) for
pF1KA1475
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1475, 973 aa
1>>>pF1KA1475 973 - 973 aa - 973 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4551+/-0.000356; mu= 21.5715+/- 0.022
mean_var=88.0182+/-17.660, 0's: 0 Z-trim(114.8): 25 B-trim: 57 in 1/52
Lambda= 0.136706
statistics sampled from 24883 (24908) to 24883 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.292), width: 16
Scan time: 11.650
The best scores are: opt bits E(85289)
NP_065908 (OMIM: 608551) vacuolar protein sorting- ( 973) 6555 1303.6 0
XP_011520145 (OMIM: 608551) PREDICTED: vacuolar pr ( 901) 6052 1204.4 0
XP_011520146 (OMIM: 608551) PREDICTED: vacuolar pr ( 871) 5890 1172.4 0
XP_016877936 (OMIM: 608551) PREDICTED: vacuolar pr ( 605) 4082 815.7 0
XP_016867477 (OMIM: 605485) PREDICTED: vacuolar pr ( 469) 174 44.9 0.0012
NP_542198 (OMIM: 605485) vacuolar protein sorting- ( 829) 174 45.1 0.0019
NP_055211 (OMIM: 605485) vacuolar protein sorting- ( 854) 174 45.1 0.0019
>>NP_065908 (OMIM: 608551) vacuolar protein sorting-asso (973 aa)
initn: 6555 init1: 6555 opt: 6555 Z-score: 6983.5 bits: 1303.6 E(85289): 0
Smith-Waterman score: 6555; 100.0% identity (100.0% similar) in 973 aa overlap (1-973:1-973)
10 20 30 40 50 60
pF1KA1 MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
910 920 930 940 950 960
970
pF1KA1 DPQRYEEEQLSWL
:::::::::::::
NP_065 DPQRYEEEQLSWL
970
>>XP_011520145 (OMIM: 608551) PREDICTED: vacuolar protei (901 aa)
initn: 6052 init1: 6052 opt: 6052 Z-score: 6447.8 bits: 1204.4 E(85289): 0
Smith-Waterman score: 6052; 100.0% identity (100.0% similar) in 895 aa overlap (79-973:7-901)
50 60 70 80 90 100
pF1KA1 IDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHT
::::::::::::::::::::::::::::::
XP_011 MYISGNIDLGKANEPNHVELGRKDDAKVHKMFLDHT
10 20 30
110 120 130 140 150 160
pF1KA1 GSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGH
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA1 IFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA1 FQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMM
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA1 GDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCT
220 230 240 250 260 270
350 360 370 380 390 400
pF1KA1 LTGQVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTGQVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRF
280 290 300 310 320 330
410 420 430 440 450 460
pF1KA1 DLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEA
340 350 360 370 380 390
470 480 490 500 510 520
pF1KA1 LAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLS
400 410 420 430 440 450
530 540 550 560 570 580
pF1KA1 SPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLAR
460 470 480 490 500 510
590 600 610 620 630 640
pF1KA1 HRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRY
520 530 540 550 560 570
650 660 670 680 690 700
pF1KA1 MEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHG
580 590 600 610 620 630
710 720 730 740 750 760
pF1KA1 HHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEE
640 650 660 670 680 690
770 780 790 800 810 820
pF1KA1 DVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATA
700 710 720 730 740 750
830 840 850 860 870 880
pF1KA1 SAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLP
760 770 780 790 800 810
890 900 910 920 930 940
pF1KA1 AYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCG
820 830 840 850 860 870
950 960 970
pF1KA1 ELMIRSIDRPFIDPQRYEEEQLSWL
:::::::::::::::::::::::::
XP_011 ELMIRSIDRPFIDPQRYEEEQLSWL
880 890 900
>>XP_011520146 (OMIM: 608551) PREDICTED: vacuolar protei (871 aa)
initn: 5890 init1: 5890 opt: 5890 Z-score: 6275.4 bits: 1172.4 E(85289): 0
Smith-Waterman score: 5890; 100.0% identity (100.0% similar) in 871 aa overlap (103-973:1-871)
80 90 100 110 120 130
pF1KA1 KDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVR
::::::::::::::::::::::::::::::
XP_011 MFLDHTGSHLLIALSSTEVLYVNRNGQKVR
10 20 30
140 150 160 170 180 190
pF1KA1 PLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGGLFGPAPDLYFRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGGLFGPAPDLYFRP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KA1 LYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYT
100 110 120 130 140 150
260 270 280 290 300 310
pF1KA1 DHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVW
160 170 180 190 200 210
320 330 340 350 360 370
pF1KA1 EYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKD
220 230 240 250 260 270
380 390 400 410 420 430
pF1KA1 SSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADF
280 290 300 310 320 330
440 450 460 470 480 490
pF1KA1 CFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLT
340 350 360 370 380 390
500 510 520 530 540 550
pF1KA1 TWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGD
400 410 420 430 440 450
560 570 580 590 600 610
pF1KA1 TEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVD
460 470 480 490 500 510
620 630 640 650 660 670
pF1KA1 AWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYA
520 530 540 550 560 570
680 690 700 710 720 730
pF1KA1 RGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQ
580 590 600 610 620 630
740 750 760 770 780 790
pF1KA1 VDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFF
640 650 660 670 680 690
800 810 820 830 840 850
pF1KA1 PDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDK
700 710 720 730 740 750
860 870 880 890 900 910
pF1KA1 CATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGS
760 770 780 790 800 810
920 930 940 950 960 970
pF1KA1 ARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSW
820 830 840 850 860 870
pF1KA1 L
:
XP_011 L
>>XP_016877936 (OMIM: 608551) PREDICTED: vacuolar protei (605 aa)
initn: 4082 init1: 4082 opt: 4082 Z-score: 4350.3 bits: 815.7 E(85289): 0
Smith-Waterman score: 4082; 100.0% identity (100.0% similar) in 605 aa overlap (369-973:1-605)
340 350 360 370 380 390
pF1KA1 LADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDV
::::::::::::::::::::::::::::::
XP_016 MVKDSSTGQLWAYTERAVFRYHVQREARDV
10 20 30
400 410 420 430 440 450
pF1KA1 WRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIAL
40 50 60 70 80 90
460 470 480 490 500 510
pF1KA1 KFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRE
100 110 120 130 140 150
520 530 540 550 560 570
pF1KA1 TKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEA
160 170 180 190 200 210
580 590 600 610 620 630
pF1KA1 YEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGE
220 230 240 250 260 270
640 650 660 670 680 690
pF1KA1 VQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLK
280 290 300 310 320 330
700 710 720 730 740 750
pF1KA1 YALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLK
340 350 360 370 380 390
760 770 780 790 800 810
pF1KA1 IARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQE
400 410 420 430 440 450
820 830 840 850 860 870
pF1KA1 LQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADC
460 470 480 490 500 510
880 890 900 910 920 930
pF1KA1 LLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDE
520 530 540 550 560 570
940 950 960 970
pF1KA1 LVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSWL
:::::::::::::::::::::::::::::::::::
XP_016 LVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSWL
580 590 600
>>XP_016867477 (OMIM: 605485) PREDICTED: vacuolar protei (469 aa)
initn: 70 init1: 70 opt: 174 Z-score: 186.3 bits: 44.9 E(85289): 0.0012
Smith-Waterman score: 189; 19.5% identity (49.0% similar) in 473 aa overlap (423-879:11-438)
400 410 420 430 440
pF1KA1 REARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYAL---T
: :: . : . . .: . .
XP_016 MGAERGENSRDIGLAYINHLVERGDYDIAARKCQKILGKN
10 20 30 40
450 460 470 480 490 500
pF1KA1 QSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGD
. .: . :: : : .:.. .: : ::: .: .: : . ..
XP_016 AALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPL--IYEMILHEFLESDYEGFATLIREW
50 60 70 80 90
510 520 530 540 550 560
pF1KA1 PEALTLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERV
: : . : :.. ... :. . : .. ..:.. . .:... .: ..
XP_016 PGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALE-IYLTLRHKDVFQL
100 110 120 130 140 150
570 580 590 600 610 620
pF1KA1 VAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPA
. : . .. .. :.. :. .. :: .. .... ....
XP_016 IHKHNLFSSIKDKIV---------LLMDFDS-------EKAVDMLLDNEDKISIKKVVEE
160 170 180 190 200
630 640 650 660 670 680
pF1KA1 LVNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYAR-GRPDSLLAYLEQAGA
: . :.:.: :.. . . : :. .::::. ::. :: .:...
XP_016 LEDRP---ELQHV-----YLHKLFKRDHHKGQRYHEKQISLYAEYDRPN-LLPFLRDS--
210 220 230 240 250
690 700 710 720 730 740
pF1KA1 SPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQV--DVDLAKQCADLPE
.: :. ::..: ... . :.. . . . :. . .. ::: : . : :
XP_016 ----THCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAK--E
260 270 280 290 300
750 760 770 780 790 800
pF1KA1 EDEELRKKLWLKIARHVVQEEEDVQTAMACLASC--PLLKIEDVLPFFPDFVTIDHFKEA
.:. .:: . . ... . . ... :.: :. . . . : .....
XP_016 QDD---GELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRI----KEGMEIPNLRDS
310 320 330 340 350
810 820 830 840 850 860
pF1KA1 ICSSLKAYNHHIQELQREMEEA--TASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLL-
. . :. :: .: : :: . .:.. . . ... . . :. .. : .: :.:
XP_016 LVKILQDYN--LQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESCLSPILP
360 370 380 390 400 410
870 880 890 900 910
pF1KA1 ---NRPF--YLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAK
.:: .: : :::: .::
XP_016 SDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK
420 430 440 450 460
>>NP_542198 (OMIM: 605485) vacuolar protein sorting-asso (829 aa)
initn: 99 init1: 70 opt: 174 Z-score: 183.0 bits: 45.1 E(85289): 0.0019
Smith-Waterman score: 197; 19.6% identity (49.1% similar) in 479 aa overlap (417-879:365-798)
390 400 410 420 430 440
pF1KA1 FRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCY
.: :: :: . : . . .:
NP_542 RDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQ
340 350 360 370 380 390
450 460 470 480 490 500
pF1KA1 AL---TQSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRL
. . . .: . :: : : .:.. .: : ::: .: .: : .
NP_542 KILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPL--IYEMILHEFLESDYEGFA
400 410 420 430 440 450
510 520 530 540 550 560
pF1KA1 GALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIM
.. : : . : :.. ... :. . : .. ..:.. . .:...
NP_542 TLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALE-IYLTLRH
460 470 480 490 500 510
570 580 590 600 610 620
pF1KA1 QDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDA
.: ... : . .. ...: . :. .. :: .. ....
NP_542 KDVFQLIHKHNLFSSIKDKIVLL---------MDFDS-------EKAVDMLLDNEDKISI
520 530 540 550
630 640 650 660 670 680
pF1KA1 RQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYAR-GRPDSLLAY
.... : . :.:.: :.. . . : :. .::::. ::. :: .
NP_542 KKVVEELEDRP---ELQHV-----YLHKLFKRDHHKGQRYHEKQISLYAEYDRPN-LLPF
560 570 580 590 600
690 700 710 720 730 740
pF1KA1 LEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQV--DVDLAKQ
:... .: :. ::..: ... . :.. . . . :. . .. ::: : .
NP_542 LRDS------THCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIE
610 620 630 640 650 660
750 760 770 780 790
pF1KA1 CADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC--PLLKIEDVLPFFPDFVTI
: :.:. .:: . . ... . . ... :.: :. . . . :
NP_542 FA--KEQDD---GELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRI----KEGMEI
670 680 690 700 710
800 810 820 830 840 850
pF1KA1 DHFKEAICSSLKAYNHHIQELQREMEEA--TASAQRIRRDLQELRGRYGTVEPQDKCATC
...... . :. :: .: : :: . .:.. . . ... . . :. .. : .:
NP_542 PNLRDSLVKILQDYN--LQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESC
720 730 740 750 760
860 870 880 890 900 910
pF1KA1 DFPLL----NRPF--YLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAK
:.: .:: .: : :::: .::
NP_542 LSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK
770 780 790 800 810 820
>>NP_055211 (OMIM: 605485) vacuolar protein sorting-asso (854 aa)
initn: 99 init1: 70 opt: 174 Z-score: 182.8 bits: 45.1 E(85289): 0.0019
Smith-Waterman score: 197; 19.6% identity (49.1% similar) in 479 aa overlap (417-879:390-823)
390 400 410 420 430 440
pF1KA1 FRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCY
.: :: :: . : . . .:
NP_055 RDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQ
360 370 380 390 400 410
450 460 470 480 490 500
pF1KA1 AL---TQSYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRL
. . . .: . :: : : .:.. .: : ::: .: .: : .
NP_055 KILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPL--IYEMILHEFLESDYEGFA
420 430 440 450 460 470
510 520 530 540 550 560
pF1KA1 GALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIM
.. : : . : :.. ... :. . : .. ..:.. . .:...
NP_055 TLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALE-IYLTLRH
480 490 500 510 520 530
570 580 590 600 610 620
pF1KA1 QDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDA
.: ... : . .. ...: . :. .. :: .. ....
NP_055 KDVFQLIHKHNLFSSIKDKIVLL---------MDFDS-------EKAVDMLLDNEDKISI
540 550 560 570 580
630 640 650 660 670 680
pF1KA1 RQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYAR-GRPDSLLAY
.... : . :.:.: :.. . . : :. .::::. ::. :: .
NP_055 KKVVEELEDRP---ELQHV-----YLHKLFKRDHHKGQRYHEKQISLYAEYDRPN-LLPF
590 600 610 620 630
690 700 710 720 730 740
pF1KA1 LEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQV--DVDLAKQ
:... .: :. ::..: ... . :.. . . . :. . .. ::: : .
NP_055 LRDS------THCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIE
640 650 660 670 680
750 760 770 780 790
pF1KA1 CADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC--PLLKIEDVLPFFPDFVTI
: :.:. .:: . . ... . . ... :.: :. . . . :
NP_055 FA--KEQDD---GELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRI----KEGMEI
690 700 710 720 730
800 810 820 830 840 850
pF1KA1 DHFKEAICSSLKAYNHHIQELQREMEEA--TASAQRIRRDLQELRGRYGTVEPQDKCATC
...... . :. :: .: : :: . .:.. . . ... . . :. .. : .:
NP_055 PNLRDSLVKILQDYN--LQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICESC
740 750 760 770 780 790
860 870 880 890 900 910
pF1KA1 DFPLL----NRPF--YLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAK
:.: .:: .: : :::: .::
NP_055 LSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMKK
800 810 820 830 840 850
973 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:34:19 2016 done: Fri Nov 4 01:34:20 2016
Total Scan time: 11.650 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]