Result of FASTA (omim) for
pF1KA1464
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1464, 620 aa
1>>>pF1KA1464 620 - 620 aa - 620 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.4433+/-0.000354; mu= -4.6970+/- 0.022
mean_var=231.0128+/-46.734, 0's: 0 Z-trim(121.7): 37 B-trim: 100 in 1/58
Lambda= 0.084383
statistics sampled from 38697 (38743) to 38697 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.454), width: 16
Scan time: 13.030
The best scores are: opt bits E(85289)
NP_065901 (OMIM: 614031) ran-binding protein 10 is ( 620) 4229 527.8 4.4e-149
XP_005256127 (OMIM: 614031) PREDICTED: ran-binding ( 650) 3099 390.2 1.2e-107
XP_016878996 (OMIM: 614031) PREDICTED: ran-binding ( 436) 2824 356.7 1e-97
NP_005484 (OMIM: 603854) ran-binding protein 9 [Ho ( 729) 2815 355.6 3.4e-97
NP_001307169 (OMIM: 614031) ran-binding protein 10 ( 391) 2604 329.9 1e-89
XP_016878998 (OMIM: 614031) PREDICTED: ran-binding ( 391) 2604 329.9 1e-89
NP_001307167 (OMIM: 614031) ran-binding protein 10 ( 533) 2282 290.7 8.7e-78
XP_016865638 (OMIM: 603854) PREDICTED: ran-binding ( 507) 2265 288.6 3.5e-77
XP_006715008 (OMIM: 603854) PREDICTED: ran-binding ( 500) 2247 286.4 1.6e-76
XP_005256129 (OMIM: 614031) PREDICTED: ran-binding ( 518) 2176 277.8 6.5e-74
XP_011512507 (OMIM: 603854) PREDICTED: ran-binding ( 639) 2058 263.5 1.7e-69
NP_001307168 (OMIM: 614031) ran-binding protein 10 ( 594) 1748 225.7 3.6e-58
XP_016878997 (OMIM: 614031) PREDICTED: ran-binding ( 421) 1474 192.3 2.9e-48
XP_011521549 (OMIM: 614031) PREDICTED: ran-binding ( 421) 1474 192.3 2.9e-48
XP_011521547 (OMIM: 614031) PREDICTED: ran-binding ( 391) 1258 166.0 2.2e-40
XP_006721301 (OMIM: 614031) PREDICTED: ran-binding ( 494) 1260 166.3 2.3e-40
>>NP_065901 (OMIM: 614031) ran-binding protein 10 isofor (620 aa)
initn: 4229 init1: 4229 opt: 4229 Z-score: 2797.5 bits: 527.8 E(85289): 4.4e-149
Smith-Waterman score: 4229; 100.0% identity (100.0% similar) in 620 aa overlap (1-620:1-620)
10 20 30 40 50 60
pF1KA1 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 HEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 DAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLR
550 560 570 580 590 600
610 620
pF1KA1 LMARAGLGSCSFARVDDYLH
::::::::::::::::::::
NP_065 LMARAGLGSCSFARVDDYLH
610 620
>>XP_005256127 (OMIM: 614031) PREDICTED: ran-binding pro (650 aa)
initn: 3171 init1: 3097 opt: 3099 Z-score: 2053.7 bits: 390.2 E(85289): 1.2e-107
Smith-Waterman score: 4159; 95.4% identity (95.4% similar) in 650 aa overlap (1-620:1-650)
10 20 30 40 50 60
pF1KA1 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
370 380 390 400 410 420
430 440 450
pF1KA1 SSPSSVNYSESNSTDSTKSQHHSSTSNQETS-----------------------------
:::::::::::::::::::::::::::::::
XP_005 SSPSSVNYSESNSTDSTKSQHHSSTSNQETSNPWLQLERRPNQAAPTTPPGPTPTSTPPH
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA1 -DSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATER
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATER
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA1 IILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCA
550 560 570 580 590 600
580 590 600 610 620
pF1KA1 ALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYLH
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYLH
610 620 630 640 650
>>XP_016878996 (OMIM: 614031) PREDICTED: ran-binding pro (436 aa)
initn: 2824 init1: 2824 opt: 2824 Z-score: 1875.5 bits: 356.7 E(85289): 1e-97
Smith-Waterman score: 2824; 100.0% identity (100.0% similar) in 423 aa overlap (198-620:14-436)
170 180 190 200 210 220
pF1KA1 VIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIE
::::::::::::::::::::::::::::::
XP_016 MAPASTPRMATALANLYPTVGLQTPGEIVDANFGQQPFLFDIE
10 20 30 40
230 240 250 260 270 280
pF1KA1 DYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQE
50 60 70 80 90 100
290 300 310 320 330 340
pF1KA1 EQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSE
110 120 130 140 150 160
350 360 370 380 390 400
pF1KA1 VRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPA
170 180 190 200 210 220
410 420 430 440 450 460
pF1KA1 PSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVL
230 240 250 260 270 280
470 480 490 500 510 520
pF1KA1 GSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGR
290 300 310 320 330 340
530 540 550 560 570 580
pF1KA1 EYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPP
350 360 370 380 390 400
590 600 610 620
pF1KA1 LMLALGQASECLRLMARAGLGSCSFARVDDYLH
:::::::::::::::::::::::::::::::::
XP_016 LMLALGQASECLRLMARAGLGSCSFARVDDYLH
410 420 430
>>NP_005484 (OMIM: 603854) ran-binding protein 9 [Homo s (729 aa)
initn: 2826 init1: 2002 opt: 2815 Z-score: 1866.0 bits: 355.6 E(85289): 3.4e-97
Smith-Waterman score: 2835; 66.3% identity (81.2% similar) in 658 aa overlap (3-620:93-729)
10 20 30
pF1KA1 MAAATADPGAGNPQP-GDSSGGGAGGGLPSPG
:..: :..: : : : ..: : .:: :.:.
NP_005 AAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPA
70 80 90 100 110 120
40 50 60 70
pF1KA1 ---------------------EQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQ
:.::.:::.::::::..::::::::::::::..::::::
NP_005 LVAGSSAAAPFPHGDSALNEQEKELQRRLKRLYPAVDEQETPLPRSWSPKDKFSYIGLSQ
130 140 150 160 170 180
80 90 100 110 120 130
pF1KA1 GNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMN
.:::::::::::. ::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMN
190 200 210 220 230 240
140 150 160 170 180 190
pF1KA1 RLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLG
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_005 RLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLG
250 260 270 280 290 300
200 210 220 230 240 250
pF1KA1 IAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARL
::::::: :::::::::::::.:::::::.::.:::::::::::.:.:. . :::. :
NP_005 IAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDRE
310 320 330 340 350 360
260 270 280 290 300 310
pF1KA1 GEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEA
::::...:.::::::::::::::: :::: :. . :: :::::::.:::::: ::.:::
NP_005 GEWQTMIQKMVSSYLVHHGYCATAEAFARSTDQTVLEELASIKNRQRIQKLVLAGRMGEA
370 380 390 400 410 420
320 330 340 350 360
pF1KA1 IETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYP------G
:::::..::.:::.:::::: :: :::.::::::::::: :..:::::::::: .
NP_005 IETTQQLYPSLLERNPNLLFTLKVRQFIEMVNGTDSEVRCLGGRSPKSQDSYPVSPRPFS
430 440 450 460 470 480
370 380 390 400 410
pF1KA1 SPSLSPRHGPSSSHMHN--TGADSP-------SCSNGVASTKSKQNHSKYPAPSSSSSSS
:::.:: :: ..:: .: : :::::: :.:..:.. .
NP_005 SPSMSPSHG---MNIHNLASGKGSTAHFSGFESCSNGVISNKAHQSYCH-----------
490 500 510 520
420 430 440 450 460 470
pF1KA1 SSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIV
:.. . :..: : :: . ..::. :. ::. ...::..:: ::: . :. ..
NP_005 --SNKHQSSNLNVPELNSINMSRSQQ----VNNFTSN-DVDMETDHYSNGVGETSSNGFL
530 540 550 560 570 580
480 490 500 510 520 530
pF1KA1 NGAYKHEDLQTD---ESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKN
::. ::. . : : .:. . :::::::.::: ::.: :::::::.:::: :. :::
NP_005 NGSSKHDHEMEDCDTEMEVDSSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLRRDCGKN
590 600 610 620 630 640
540 550 560 570 580 590
pF1KA1 LAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL
:. .::.::::::::::::. :::.:::::::::::.::::::::..:::::::: ::.
NP_005 TANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLALAM
650 660 670 680 690 700
600 610 620
pF1KA1 GQASECLRLMARAGLGSCSFARVDDYLH
:::..:: ::::.:.:::.:: :.::::
NP_005 GQATQCLGLMARSGIGSCAFATVEDYLH
710 720
>>NP_001307169 (OMIM: 614031) ran-binding protein 10 iso (391 aa)
initn: 2604 init1: 2604 opt: 2604 Z-score: 1731.5 bits: 329.9 E(85289): 1e-89
Smith-Waterman score: 2604; 100.0% identity (100.0% similar) in 391 aa overlap (230-620:1-391)
200 210 220 230 240 250
pF1KA1 LYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQN
::::::::::::::::::::::::::::::
NP_001 MREWRAKVQGTVHCFPISARLGEWQAVLQN
10 20 30
260 270 280 290 300 310
pF1KA1 MVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYP
40 50 60 70 80 90
320 330 340 350 360 370
pF1KA1 GLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM
100 110 120 130 140 150
380 390 400 410 420 430
pF1KA1 HNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKS
160 170 180 190 200 210
440 450 460 470 480 490
pF1KA1 QHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQ
220 230 240 250 260 270
500 510 520 530 540 550
pF1KA1 LCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQ
280 290 300 310 320 330
560 570 580 590 600 610
pF1KA1 LDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYL
340 350 360 370 380 390
620
pF1KA1 H
:
NP_001 H
>>XP_016878998 (OMIM: 614031) PREDICTED: ran-binding pro (391 aa)
initn: 2604 init1: 2604 opt: 2604 Z-score: 1731.5 bits: 329.9 E(85289): 1e-89
Smith-Waterman score: 2604; 100.0% identity (100.0% similar) in 391 aa overlap (230-620:1-391)
200 210 220 230 240 250
pF1KA1 LYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQN
::::::::::::::::::::::::::::::
XP_016 MREWRAKVQGTVHCFPISARLGEWQAVLQN
10 20 30
260 270 280 290 300 310
pF1KA1 MVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYP
40 50 60 70 80 90
320 330 340 350 360 370
pF1KA1 GLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM
100 110 120 130 140 150
380 390 400 410 420 430
pF1KA1 HNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKS
160 170 180 190 200 210
440 450 460 470 480 490
pF1KA1 QHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQ
220 230 240 250 260 270
500 510 520 530 540 550
pF1KA1 LCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQ
280 290 300 310 320 330
560 570 580 590 600 610
pF1KA1 LDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYL
340 350 360 370 380 390
620
pF1KA1 H
:
XP_016 H
>>NP_001307167 (OMIM: 614031) ran-binding protein 10 iso (533 aa)
initn: 2354 init1: 2280 opt: 2282 Z-score: 1517.5 bits: 290.7 E(85289): 8.7e-78
Smith-Waterman score: 3342; 94.4% identity (94.4% similar) in 533 aa overlap (118-620:1-533)
90 100 110 120 130 140
pF1KA1 ASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDG
::::::::::::::::::::::::::::::
NP_001 MGIGLSAQGVNMNRLPGWDKHSYGYHGDDG
10 20 30
150 160 170 180 190 200
pF1KA1 HSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KA1 TPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVH
100 110 120 130 140 150
270 280 290 300 310 320
pF1KA1 HGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPN
160 170 180 190 200 210
330 340 350 360 370 380
pF1KA1 LLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP
220 230 240 250 260 270
390 400 410 420 430 440
pF1KA1 SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN
280 290 300 310 320 330
450 460 470
pF1KA1 QETS------------------------------DSEMEMEAEHYPNGVLGSMSTRIVNG
:::: ::::::::::::::::::::::::::
NP_001 QETSNPWLQLERRPNQAAPTTPPGPTPTSTPPHSDSEMEMEAEHYPNGVLGSMSTRIVNG
340 350 360 370 380 390
480 490 500 510 520 530
pF1KA1 AYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTE
400 410 420 430 440 450
540 550 560 570 580 590
pF1KA1 MLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASE
460 470 480 490 500 510
600 610 620
pF1KA1 CLRLMARAGLGSCSFARVDDYLH
:::::::::::::::::::::::
NP_001 CLRLMARAGLGSCSFARVDDYLH
520 530
>>XP_016865638 (OMIM: 603854) PREDICTED: ran-binding pro (507 aa)
initn: 2267 init1: 1487 opt: 2265 Z-score: 1506.7 bits: 288.6 E(85289): 3.5e-77
Smith-Waterman score: 2284; 66.5% identity (81.9% similar) in 525 aa overlap (114-620:4-507)
90 100 110 120 130 140
pF1KA1 HKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYH
. ::::::::::::::::::::::::::::
XP_016 MDHKKGYMGIGLSAQGVNMNRLPGWDKHSYGYH
10 20 30
150 160 170 180 190 200
pF1KA1 GDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPT
::::::::::::::::::::::::::::::::::.::::::::::::::::::: :::::
XP_016 GDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPT
40 50 60 70 80 90
210 220 230 240 250 260
pF1KA1 VGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSS
::::::::.:::::::.::.:::::::::::.:.:. . :::. : ::::...:.::::
XP_016 VGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSS
100 110 120 130 140 150
270 280 290 300 310 320
pF1KA1 YLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLE
::::::::::: :::: :. . :: :::::::.:::::: ::.::::::::..::.:::
XP_016 YLVHHGYCATAEAFARSTDQTVLEELASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLE
160 170 180 190 200 210
330 340 350 360 370
pF1KA1 HNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYP------GSPSLSPRHGPSSS
.:::::: :: :::.::::::::::: :..:::::::::: .:::.:: ::
XP_016 RNPNLLFTLKVRQFIEMVNGTDSEVRCLGGRSPKSQDSYPVSPRPFSSPSMSPSHG---M
220 230 240 250 260 270
380 390 400 410 420
pF1KA1 HMHN--TGADSP-------SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNY
..:: .: : :::::: :.:..:.. . :.. . :..:
XP_016 NIHNLASGKGSTAHFSGFESCSNGVISNKAHQSYCH-------------SNKHQSSNLNV
280 290 300 310
430 440 450 460 470 480
pF1KA1 SESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTD-
: :: . ..::. :. ::. ...::..:: ::: . :. ..::. ::. . :
XP_016 PELNSINMSRSQQ----VNNFTSN-DVDMETDHYSNGVGETSSNGFLNGSSKHDHEMEDC
320 330 340 350 360 370
490 500 510 520 530 540
pF1KA1 --ESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSL
: .:. . :::::::.::: ::.: :::::::.:::: :. ::: :. .::.:::::
XP_016 DTEMEVDSSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLRRDCGKNTANKKMLKDAFSL
380 390 400 410 420 430
550 560 570 580 590 600
pF1KA1 LAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARA
:::::::. :::.:::::::::::.::::::::..:::::::: ::.:::..:: ::::.
XP_016 LAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLALAMGQATQCLGLMARS
440 450 460 470 480 490
610 620
pF1KA1 GLGSCSFARVDDYLH
:.:::.:: :.::::
XP_016 GIGSCAFATVEDYLH
500
>>XP_006715008 (OMIM: 603854) PREDICTED: ran-binding pro (500 aa)
initn: 2249 init1: 1469 opt: 2247 Z-score: 1494.9 bits: 286.4 E(85289): 1.6e-76
Smith-Waterman score: 2266; 66.7% identity (81.9% similar) in 519 aa overlap (118-620:1-500)
90 100 110 120 130 140
pF1KA1 ASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDG
::::::::::::::::::::::::::::::
XP_006 MGIGLSAQGVNMNRLPGWDKHSYGYHGDDG
10 20 30
150 160 170 180 190 200
pF1KA1 HSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQ
::::::::::::::::::::::::::::::.::::::::::::::::::: :::::::::
XP_006 HSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KA1 TPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVH
::::.:::::::.::.:::::::::::.:.:. . :::. : ::::...:.::::::::
XP_006 TPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVH
100 110 120 130 140 150
270 280 290 300 310 320
pF1KA1 HGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPN
::::::: :::: :. . :: :::::::.:::::: ::.::::::::..::.:::.:::
XP_006 HGYCATAEAFARSTDQTVLEELASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPN
160 170 180 190 200 210
330 340 350 360 370 380
pF1KA1 LLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQDSYP------GSPSLSPRHGPSSSHMHN
::: :: :::.::::::::::: :..:::::::::: .:::.:: :: . :
XP_006 LLFTLKVRQFIEMVNGTDSEVRCLGGRSPKSQDSYPVSPRPFSSPSMSPSHG-MNIHNLA
220 230 240 250 260
390 400 410 420 430
pF1KA1 TGADSP-------SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST
.: : :::::: :.:..:.. . :.. . :..: : ::
XP_006 SGKGSTAHFSGFESCSNGVISNKAHQSYCH-------------SNKHQSSNLNVPELNSI
270 280 290 300 310
440 450 460 470 480 490
pF1KA1 DSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTD---ESSM
. ..::. :. ::. ...::..:: ::: . :. ..::. ::. . : : .
XP_006 NMSRSQQ----VNNFTSN-DVDMETDHYSNGVGETSSNGFLNGSSKHDHEMEDCDTEMEV
320 330 340 350 360 370
500 510 520 530 540 550
pF1KA1 DDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDP
:. . :::::::.::: ::.: :::::::.:::: :. ::: :. .::.:::::::::::
XP_006 DSSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLRRDCGKNTANKKMLKDAFSLLAYSDP
380 390 400 410 420 430
560 570 580 590 600 610
pF1KA1 WSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCS
:. :::.:::::::::::.::::::::..:::::::: ::.:::..:: ::::.:.:::.
XP_006 WNSPVGNQLDPIQREPVCSALNSAILETHNLPKQPPLALAMGQATQCLGLMARSGIGSCA
440 450 460 470 480 490
620
pF1KA1 FARVDDYLH
:: :.::::
XP_006 FATVEDYLH
500
>>XP_005256129 (OMIM: 614031) PREDICTED: ran-binding pro (518 aa)
initn: 2248 init1: 2174 opt: 2176 Z-score: 1448.0 bits: 277.8 E(85289): 6.5e-74
Smith-Waterman score: 3236; 94.2% identity (94.2% similar) in 517 aa overlap (134-620:2-518)
110 120 130 140 150 160
pF1KA1 YFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTF
::::::::::::::::::::::::::::::
XP_005 MGWDKHSYGYHGDDGHSFCSSGTGQPYGPTF
10 20 30
170 180 190 200 210 220
pF1KA1 TTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFL
40 50 60 70 80 90
230 240 250 260 270 280
pF1KA1 FDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTET
100 110 120 130 140 150
290 300 310 320 330 340
pF1KA1 PIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNG
160 170 180 190 200 210
350 360 370 380 390 400
pF1KA1 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS
220 230 240 250 260 270
410 420 430 440 450
pF1KA1 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS------------
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSNPWLQLERRPNQ
280 290 300 310 320 330
460 470 480 490
pF1KA1 ------------------DSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDD
::::::::::::::::::::::::::::::::::::::::::
XP_005 AAPTTPPGPTPTSTPPHSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDD
340 350 360 370 380 390
500 510 520 530 540 550
pF1KA1 RHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWS
400 410 420 430 440 450
560 570 580 590 600 610
pF1KA1 CPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFA
460 470 480 490 500 510
620
pF1KA1 RVDDYLH
:::::::
XP_005 RVDDYLH
620 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:13:15 2016 done: Wed Nov 2 21:13:16 2016
Total Scan time: 13.030 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]