Result of FASTA (ccds) for
pF1KA1404
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1404, 1918 aa
1>>>pF1KA1404 1918 - 1918 aa - 1918 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3424+/-0.00149; mu= 17.4897+/- 0.091
mean_var=213.6339+/-40.146, 0's: 0 Z-trim(107.4): 104 B-trim: 59 in 2/49
Lambda= 0.087748
statistics sampled from 9474 (9571) to 9474 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.294), width: 16
Scan time: 4.980
The best scores are: opt bits E(32554)
CCDS13417.1 ZNFX1 gene_id:57169|Hs108|chr20 (1918) 13200 1686.2 0
>>CCDS13417.1 ZNFX1 gene_id:57169|Hs108|chr20 (1918 aa)
initn: 13200 init1: 13200 opt: 13200 Z-score: 9040.7 bits: 1686.2 E(32554): 0
Smith-Waterman score: 13200; 99.9% identity (99.9% similar) in 1918 aa overlap (1-1918:1-1918)
10 20 30 40 50 60
pF1KA1 MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALRGGASHPGRHPRANNHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MEERRPHLDARPRNSHTNHRGPVDGELPPRARNQANNPPANALRGGASHPGRHPRANNHP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQENDTRWRNGNQDCRNRRPPWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQENDTRWRNGNQDCRNRRPPWS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSSMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NDNFQQWRTPHQKPTEQPQQAKKLGYKFLESLLQKDPSEVVITLATSLGLKELLSHSSMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 SNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLKVCLPAYVVGMITEPIPDIRNQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SNFLELICQVLRKACSSKMDRQSVLHVLGILKNSKFLKVCLPAYVVGMITEPIPDIRNQY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 PEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTSLNALRASGVDIEEETEKNLEKVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEHISNIISLLQDLVSVFPASSVQETSMLVSLLPTSLNALRASGVDIEEETEKNLEKVQT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 IIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IIEHLQEKRREGTLRVDTYTLVQPEAEDHVESYRTMPIYPTYNEVHLDERPFLRPNIISG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KYDSTAIYLDTHFRLLREDFVRPLREGILELLQSFEDQGLRKRKFDDIRIYFDTRIITPM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 CSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CSSSGIVYKVQFDTKPLKFVRWQNSKRLLYGSLVCMSKDNFETFLFATVSNREQEDLCRG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 IVQLCFNEQSQQLLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IVQLCFNEQSQQLLAEVQPSDSFLMVETTAYFEAYRHVLEGLQEVQEEDVPFQRNIVECN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 SHVKEPRYLLMGGRYDFTPLIENPSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SHVKEPRYLLMGGRYDFTPLIENPSATGEFLRNVEGLRHPRINVLDPGQWPSKEALKLDD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCYTNH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMHLRRAYMSIMT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 QMKESEQELHEGAKTLECTMRGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QMKESEQELHEGAKTLECTMRGVLREQYLQKYISPQHWESLMNGPVQDSEWICFQHWKHS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 MMLEWLGLGVGSFTQSVSPAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MMLEWLGLGVGSFTQSVSPAGPENTAQAEGDEEEEGEEESSLIEIAEEADLIQADRVIEE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 EEVVRPQRRKKEESGADQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEVVRPQRRKKEESGADQELAKMLLAMRLDHCGTGTAAGQEQATGEWQTQRNQKKKMKKR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 VKDELRKLNTMTAAEANEIEDVWHLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSA
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS13 VKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYERQYRTSA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 RLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RLLTPHIYQDLENHPSVLKYEKIKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVEL
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 CKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIILLSLV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 RSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPML
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 RLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RLCCQNHPETHTLVSKASDFQKVPEGGCSLPCEFRLGCGHVCTRACHPYDSSHKEFQCMK
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 PCQKVICQEGHRCPLVCFQECQPCQVKVPKIIPRCGHEQMVPCSVPESDFCCQEPCSKSL
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS13 PCQKVICQEGHRCPLVCFQECQPCQVKVPKTIPRCGHEQMVPCSVPESDFCCQEPCSKSL
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 RCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RCGHRCSHPCGEDCVQLCSEMVTIKLKCGHSQPVKCGHVEGLLYGGLLVKCTTKCGTILD
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 CGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 CGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPCIGECPPCQRTCQNRCVHSQCK
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 KKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KKCGELCSPCVEPCVWRCQHYQCTKLCSEPCNRPPCYVPCTKLLVCGHPCIGLCGEPCPK
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 KCRICHMDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KCRICHMDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQALDRYMNEQKDDEVAIRLKVCP
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA1 ICQVPIRKNLRYGTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ICQVPIRKNLRYGTSIKQRLEEIEIIKEKIQGSAGEIATSQERLKALLERKSLLHQLLPE
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA1 DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DFLMLKEKLAQKNLSVKDLGLVENYISFYDHLASLWDSLKKMHVLEEKRVRTRLEQVHEW
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA1 LAKKRLSFTSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LAKKRLSFTSQELSDLRSEIQRLTYLVNLLTRYKIAEKKVKDSIAVEVYSVQNILEKTCK
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA1 FTQEDEQLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FTQEDEQLVQEKMEALKATLPCSGLGISEEERVQIVSAIGYPRGHWFKCRNGHIYVIGDC
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910
pF1KA1 GGAMERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GGAMERGTCPDCKEVIGGTNHTLERSNQLASEMDGAQHAAWSDTANNLMNFEEIQGMM
1870 1880 1890 1900 1910
1918 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:09:48 2016 done: Wed Nov 2 21:09:49 2016
Total Scan time: 4.980 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]