FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1386, 1089 aa
  1>>>pF1KA1386 1089 - 1089 aa - 1089 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.2284+/-0.00108; mu= 9.0098+/- 0.065
 mean_var=201.2790+/-42.783, 0's: 0 Z-trim(110.2): 56  B-trim: 3 in 1/49
 Lambda= 0.090401
 statistics sampled from 11408 (11454) to 11408 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.352), width:  16
 Scan time:  4.570

The best scores are:                                      opt bits E(32554)
CCDS47639.1 ANKIB1 gene_id:54467|Hs108|chr7        (1089) 7481 989.5       0


>>CCDS47639.1 ANKIB1 gene_id:54467|Hs108|chr7             (1089 aa)
 initn: 7481 init1: 7481 opt: 7481  Z-score: 5284.3  bits: 989.5 E(32554):    0
Smith-Waterman score: 7481; 99.9% identity (100.0% similar) in 1089 aa overlap (1-1089:1-1089)

               10        20        30        40        50        60
pF1KA1 MGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEPYQHNTPLHYAARHGMNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MGNTTTKFRKALINGDENLACQIYENNPQLKESLDPNTSYGEPYQHNTPLHYAARHGMNK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 ILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILGTFLGRDGNPNKRNVHNETSMHLLCMGPQIMISEGALHPRLARPTEDDFRRADCLQMI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKWKGAKLDQGEYERAAIDAVDNKKNTPLHYAAASGMKACVELLVKHGGDLFAENENKDT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 PCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PCDCAEKQHHKDLALNLESQMVFSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDML
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 IVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 TLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 ESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ESFLNLKIQEGEAHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 WCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 WCPTPGCDRAVRLTKQGSNTSGSDTLSFPLLRAPAVDCGKGHLFCWECLGEAHEPCDCQT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 WKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKC
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 KYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDRFMH
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 YYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALKETEGGCPDTTFIEDAVHVLLKTRRIL
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 KCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KCSYPYGFFLEPKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIKAACLVQQK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 RQEFLASVARGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RQEFLASVARGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDV
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 HSLLSNPPDPDEPSESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HSLLSNPPDPDEPSESTLDIPEGGSSSRRPGTSVVSSASMSVLHSSSLRDYTPASRSENQ
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 DSLQALSSLDEDDPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DSLQALSSLDEDDPNILLAIQLSLQESGLALDEETRDFLSNEASLGAIGTSLPSRLDSVP
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 RNTDSPRAALSSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RNTDSPRAALSSSELLELGDSLMRLGAENDPFSTDTLSSHPLSEARSDFCPSSSDPDSAG
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 QDPNINDNLLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVEMVLPE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS47 QDPNINDNLLGNIMAWFHDMNPQSIALIPPATTEISADSQLPCIKDGSEGVKDVELVLPE
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 DSMFEDASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DSMFEDASVSEGRGTQIEENPLEENILAGEAASQAGDSGNEAANRGDGSDVSSQTPQTSS
             1030      1040      1050      1060      1070      1080

                
pF1KA1 DWLEQVHLV
       :::::::::
CCDS47 DWLEQVHLV
                




1089 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 11:02:54 2016 done: Thu Nov  3 11:02:55 2016
 Total Scan time:  4.570 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]